Lepisosteus oculatus (spotted gar): 102687334
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Entry
102687334 CDS
T07349
Symbol
bbs4
Name
(RefSeq) Bardet-Biedl syndrome 4 protein
KO
K16531
Bardet-Biedl syndrome 4 protein
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
loc03036
]
102687334 (bbs4)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
loc03037
]
102687334 (bbs4)
Chromosome and associated proteins [BR:
loc03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
102687334 (bbs4)
Cilium and associated proteins [BR:
loc03037
]
Primary cilia and associated proteins
BBSome
102687334 (bbs4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_19
TPR_11
TPR_14
ANAPC3
CFAP70_TPR_C
TPR_12
TPR_17
TPR_16
TPR_9
TPR_CcmH_CycH
RMD1-3
TPR_Psidin_N
ARM_TT21_4th
ARM_TT21_2nd
CFAP70_mid_TPR
TPR_INTS8_3
TPR_15
IFT56
TPR_YpiA_C
NatA_aux_su
Wzy_C_2
ARM_TT21_N
PknG_TPR
ARM_TT21_C
CNOT10_TPR
ChAPs
TPR_20
Coatomer_E
CABIN1_N
TTC22_C
CadC_C
BDI_1685-like_C
P8_CR
RMD9_mid
Motif
Other DBs
NCBI-GeneID:
102687334
NCBI-ProteinID:
XP_015198940
Ensembl:
ENSLOCG00000014945
LinkDB
All DBs
Position
LG3:54633154..54654010
Genome browser
AA seq
484 aa
AA seq
DB search
MAEEKAQTNPQLPVGTEIKKTRPKKAPELPILERRNWLIHLHYIRKDYETCKAIIKEQLQ
ETQGMCEYAIYVQALILRLEGKIQQSLELFQSCAILNPRSADNLKQVARSLFLLGKHKAA
IEVYNEAAKLNQKDWEISHNLGVCYMYLKDFKNAQEQLNTALQLNKHDLTFVMLAKIHLL
EGDIEKAVEVYKKAVEFSPENTELLTTLGLLYLQLGAYQKAFEHLGNALTYNPNNYKAIL
AAGSMMQTHGDFDVAMTKYRVAACAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLA
PFDWKILYNLGLVHLTMQQYASAFHFLSAAINLQPKMGELYMLLAVALTNLEDVENAKRS
YEQAVSLDHIEMAQKMGAALQVGESLVWTKPAKDTKSKQHAAAPSKPACSQQPLGSNQAL
GQAMSSAAGYSKSIQLSAGSAAPSLQKPPSLPLEPEPTAEASAQEPTSPSEPKDKKTKAR
LVAE
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagaaggctcaaacgaatccacagctcccagtgggaacagaaattaagaag
actcgtcccaaaaaagcaccagagcttcccatcctggaaaggaggaactggctcatccat
ctccactatatccgaaaggactatgaaacctgcaaggctataattaaagaacaattgcag
gagacacagggaatgtgtgaatatgcaatatatgtacaagctttaatactccgtcttgag
ggaaagattcagcaatccctggagctttttcagagctgtgctattctcaatcccagaagt
gcagacaacctgaaacaagttgctagatctctttttctacttggaaaacataaggcagca
attgaagtttacaatgaagctgcaaaactcaatcagaaggactgggagatcagccataac
cttggtgtgtgctacatgtatctgaaagacttcaaaaatgctcaggagcagttaaacact
gctttgcagctaaacaagcatgacttgacttttgtgatgctggcaaagatccatttgttg
gaaggagacattgaaaaggctgttgaagtctacaaaaaagctgttgagttctcgcctgag
aacaccgaacttttgacaacacttggactactctatctgcagcttggagcctatcaaaaa
gcatttgaacatcttgggaatgctctaacatataaccccaataactacaaggccatccta
gcagctgggagcatgatgcagacccatggtgattttgatgtggccatgaccaagtaccgt
gtagctgcctgtgctgtacctgagagcccaccactctggaacaatataggaatgtgcttc
tttggcaaaaagaagtatgtagcggctatcagttgtttaaagagagctaactacctggct
ccttttgactggaagatcctgtataacctggggctggtgcatcttactatgcagcagtat
gcctctgcttttcacttcctcagtgctgccatcaatctgcagccaaagatgggagagctg
tacatgctgctagcagtggcccttactaatttggaagatgtagaaaatgccaagagatca
tatgagcaagctgtttctttggaccatatagaaatggctcagaagatgggagcagcgctg
caggtcggagagagcctggtgtggacaaagccagccaaagacacgaaatccaagcagcat
gctgctgctcccagcaagccagcctgctcccagcagcctctgggctccaatcaggcatta
ggccaggctatgtcctcagccgcgggatacagcaagtccatccagctttcagcaggtagt
gcagccccaagcctgcagaagccaccatctctgcccctggagccagagcccactgctgag
gcatcagcccaggagccgacttccccatctgagccgaaggacaagaagaccaaggccagg
ctggtggccgaatag
DBGET
integrated database retrieval system
