Lepisosteus oculatus (spotted gar): 102687476
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Entry
102687476 CDS
T07349
Name
(RefSeq) serine/arginine-rich splicing factor 7-like
KO
K12896
serine/arginine-rich splicing factor 7
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03040
Spliceosome
loc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102687476
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
102687476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
loc03041
]
102687476
Spliceosome [BR:
loc03041
]
Common components
Common spliceosomal components
SR proteins
102687476
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
RRM_5
zf-CCHC_3
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
102687476
NCBI-ProteinID:
XP_006627604
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All DBs
Position
LG2:complement(62755100..62763283)
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AA seq
239 aa
AA seq
DB search
MSYYSSSRSSSHSTDCKVYVGDLGSGAAKGELERAFGYYGPLRSVWVARNPPGFAFVEYE
DSRDAEDAVKGMDGKVLCGSRIRVELSTGVSRKTRYGRPSRRHFDPNDRCYQCGERGHYA
YDCYRFSKRGGSRRSRSRSRSRSRSRSRSRSRGRRYRSRSRSRNRSASPARSRSRTPVRS
RSRSRSRSRSLSRSKGRSASRSRSRSRSRSRSRSHSASAKRESRSRSPSPRKSLTPDAK
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtattactcgtcctcccgcagctcgtcccactccaccgactgcaaggtgtacgtg
ggggacctgggcagcggggcggcgaagggcgagctggagcgggcgttcggctactacggg
ccgctgcgcagcgtgtgggtcgcccgcaacccccccggcttcgccttcgtggagtacgag
gactcccgggacgccgaggacgcggtgaagggcatggatggcaaggtgctgtgcggctcc
cggatccgcgtggagctgtcgacgggcgtctctcggaagacacgctacgggcgccccagc
cggcggcactttgaccccaacgaccgttgctaccagtgtggggagagaggccactacgcc
tacgactgctaccgcttcagcaagaggggcggcagccggcgcagcaggtctcgctccagg
tcccggtcccgctccaggtcccggtccaggtcccgaggacgtcgctatcgctctcgcagc
aggagccgcaaccggtccgcttccccggctcgctctaggtccagaactccggtgcgcagt
cgctcccgatctcgctccaggtcacgctccttgtctcgctccaaggggcgctctgcctcc
cggtcccggtctcgctcccggtcccgctcgcgctcccggtcccactcagccagcgccaaa
cgagaaagccgctcccggtcgcccagccccaggaagagcctgacacccgacgccaagtga
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