Lepisosteus oculatus (spotted gar): 102687498
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Entry
102687498 CDS
T07349
Symbol
pex1
Name
(RefSeq) peroxisome biogenesis factor 1 isoform X1
KO
K13338
peroxin-1
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
102687498 (pex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
loc04131
]
102687498 (pex1)
Membrane trafficking [BR:
loc04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
102687498 (pex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
AAA_22
AAA_14
nSTAND3
TIP49
AAA_33
AAA_18
RNA_helicase
AAA_5
IstB_IS21
RuvB_N
AAA_28
AAA_25
AAA_7
DUF815
APS_kinase
NACHT
ATPase
Parvo_NS1
ATPase_2
CbiA
Motif
Other DBs
NCBI-GeneID:
102687498
NCBI-ProteinID:
XP_015213585
Ensembl:
ENSLOCG00000010675
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All DBs
Position
LG11:complement(36663610..36681025)
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AA seq
1259 aa
AA seq
DB search
MLGSHGIQPVTLVFNNAKNCFLHLSSSLVSQLRLQENQALELSWDRCQPVYLSWTKCLQS
SFQGESVVEVNRHLGARLGIKDGEQAFLRPCWQILSIQQVFVEPLSSDDWEILELHSSAL
ERHLLDQIRVVYPNGLFPVWVDQHTVIYVRIAALTPAAPYGRLEQLTELIVSPKLRQDGE
SPARPSAPPNWQADASQARGPHGPDNAPGRDALGTHRGAPPCVSPGGGRDLRSLIRSMFA
GSPAPQREVPAVPSVPPVLGDSVFRVCRSAPFPAGRQSPAHGAAHVFPWRHPCAARGGAP
FAVTYGRLSRLHRPREPREKPHRTLSQPERKRGPEARGAGDQLGSGGGAAGPLAVRIICH
GVEELADTQGCGSRRGMPYGGRVWISESIRRRLGIDFCTAVRIQPLNSVPEIASCVRLQP
LQSLPQKVKEQDVQSAFLDWLQAQNNEELPWLTGRSSFVALPVHEENMEFALTVMKPESK
KTGNGESDEVFMLTTSLLEKTDIQLSRYPQAAGSESVRAQDPSQILAPPVQSLGGVEDIA
DSAFEHISQSLMGRPLSQELLSVVSGLRNGALLLTGLKGSGKTALATALCRKAADVLDAH
VEVIDCQKLRGKRGETVRKKLEEAFEEAAWRQPSVVLLDDLEQLTGAAAGPEQEHGPEAL
RSQQLAQALKDLVSDAVVHGSLIALIATSQSEHTLHPSLTSAQGSHFFQCIKEIPRPSQA
QRSEILRAIIKSKSIIAEDSLGVLDLESVSRETEGYLASDFTLLVERAVHASVLHNRITA
SEVFLATSDFQQALRSFTPPSLLSSRLNAPPEAGWDRVGGLREVRQVLMDTVQLPAKYPA
LFASLPIRQRSGVLLYGAPGTGKTLLAGAVAKESGMNFISIKGPELLSKYIGASELAVRD
VFQRAQAAKPCILFFDEFDSLAPRRGHDSTGVTDRVVNQLLTQLDGVERLDGVYVLAATS
RPDLIDPALLRPGRLDKSLYCPPPDQEARLEILKALTQTVPLAGDVDFDQMAAATDSFTG
ADLKALLYNAQLEAIHSNLGAGSLHEVGSGSDSDVSLSSMIFLNHSSGSDDSAGEGEGGL
EHSMVLLDSSELLPEDPRHNMWRLYFGSSYESELGNPTPSELNSQCLSGPNSMTHDITGA
SLRDMASSQTPAFMASLQEGFQELSHEQLDRLRAEISSIKANYRSRMMEESFLTQAAPSK
AALLICQSHLTGALASTRASVGKQDWKKYHELYDAFRNTCEGRTQGPPTTKPGQRVTLA
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgctgggaagccatggcatacagccagtgacattagtttttaataatgctaaaaactgt
tttctgcacctctcttcgagcttagtttcacagcttcgccttcaagagaaccaagccctg
gagctctcctgggaccgctgtcaacccgtgtacctcagctggacgaaatgcctgcagtct
tcattccagggggagagcgttgtagaggtcaacaggcacttgggtgccaggcttggaatc
aaagatggagagcaggcatttctcagaccttgctggcagatcctatccattcagcaggtg
tttgtggaaccactgtcatctgatgactgggagatattggagcttcacagctcagcactt
gagcgacacctccttgaccagataagggtcgtgtatccaaacggactgtttcccgtgtgg
gtggaccagcacactgtcatctacgtcaggatagctgccctcacgcccgctgctccgtat
ggccggctggagcagctcaccgagctgatcgtctcccccaagctgcgccaagacggggag
agcccggcgcgcccttctgcccccccgaactggcaagcagatgccagtcaggctcggggt
ccgcacgggccagacaacgccccggggagagacgcgttgggcacccaccgcggggcgcca
ccgtgcgtctcccccggaggggggcgcgatctgcggagcctgatccgatccatgttcgcc
gggagccctgccccccagagggaggttcccgctgtcccttcggtgccgcccgtcctcggg
gactctgttttcagagtgtgcaggagcgcccccttccctgccggccggcagagccccgct
cacggagcagcccacgtcttcccctggcgccacccctgcgcggcgcgcggcggggccccg
ttcgctgtcacctacggccggctgtccaggctgcaccgccccagggaaccaagggaaaag
ccgcacaggacgctgtcccagcccgagaggaagaggggccccgaggctcggggcgctgga
gaccagctcgggtccggagggggcgccgcagggcccctggccgtcaggatcatatgccat
ggggtggaggagctggcggacacccagggctgcggcagcaggagagggatgccgtatggt
gggagggtgtggatttcagaatccattagaagaagactgggtattgatttctgcacagcc
gttagaatacagccattaaactcagtcccagaaatagcatcctgtgtccgattgcagccc
ttgcaatcactgccacagaaggtcaaggagcaggatgtccagtctgctttcctggactgg
ctgcaagctcagaataatgaagagctgccttggctcacagggaggtccagctttgtcgcc
ttgccagtccacgaagaaaacatggagtttgccttgactgtgatgaagccagaatccaaa
aagacaggaaacggtgaatcagatgaggttttcatgttgacgaccagtttgctggaaaaa
acagacatacagctatcaaggtatccacaggcagctgggtcagaatctgtgcgagcacag
gatcccagccagattcttgccccaccagtacaatctctgggaggagtggaagacattgct
gactctgcctttgagcacatctcccagagcctgatgggacggcctctctcccaggagctg
ctgtctgtagtatcagggctcaggaacggagcacttctcctcacaggactcaagggcagt
gggaagacagctcttgccacagctctctgcagaaaagcagctgatgtcttggatgctcat
gtggaagtcattgactgtcaaaaactaagagggaagagaggggagacggtccgaaagaag
ctggaggaggcgtttgaggaagccgcgtggaggcagccctctgtggtgctcctggacgac
ctggagcagctgaccggggccgcggccggccccgagcaggagcacggcccggaggcgctc
cgcagccagcagctggcccaggccttgaaggatctagtgagtgatgctgttgtacacggc
agtctgattgccttgattgctaccagccagagtgagcacaccctccacccttcattgaca
tcagcgcagggctctcatttctttcagtgcatcaaggagattccccgccccagccaggcc
caaagaagtgaaattcttcgagcaataattaagagcaaaagcatcattgctgaagatagc
ctgggagtacttgatctcgagtcagtttccagggaaactgaaggttacctggcgagcgat
ttcaccctgctggttgaaagagcagttcacgccagtgttcttcacaacagaatcacagct
tcagaggtgtttttggccacctctgacttccagcaggcactcagaagcttcaccccgccc
tctctcctgagttcccgcctgaacgccccccccgaggcaggctgggaccgcgtcgggggc
ctgagggaggtccggcaggtgctgatggacaccgttcagcttccagcaaagtatcctgcc
ctgtttgcaagtctgcccatccgacagcgctctggagtgctgctgtacggagctccgggc
acagggaagactttgctagcaggagctgttgccaaggagagcggaatgaacttcatcagc
atcaaggggcctgaactcctcagcaaatacattggagccagtgagctggccgtgcgcgac
gtgtttcagagggcccaggctgccaagccctgcatcctgttctttgacgagtttgactcc
ctggctccgcgcagggggcacgacagcacaggagtgaccgaccgtgtggtcaaccagctg
ctcactcagctggacggcgtggagaggctggatggggtgtatgtgttggctgccaccagt
cgtcctgacttgatagatccggcccttctgagacccggtcgtctggacaagtctctgtac
tgtcctccccctgatcaggaggcccgactggagattctcaaggcccttactcagactgta
ccgctggcgggagatgtggactttgaccaaatggcagccgccaccgactccttcactggg
gctgacttgaaggcactgctgtacaacgctcaactagaggcaattcatagcaacctgggg
gccggctctctccatgaagtggggtctggctcggacagcgacgtcagcttgtcttccatg
atcttcctgaaccacagcagcgggtcagacgactcagcaggcgagggggagggcgggctt
gaacactccatggtgctgctggactcctccgagctgcttccagaggacccgcgtcacaac
atgtggcgcctttacttcggcagctcctacgagtccgagctggggaacccgacaccctca
gagctgaattcacagtgcctgtcgggaccaaactcgatgacccacgatatcactggagcc
tcgctgagggacatggcctcttcccagaccccagcgttcatggcatcgctgcaggaggga
tttcaggagctgagccatgagcagttagatcgcctgcgagcggagatcagcagcatcaaa
gccaactaccgcagcaggatgatggaagagtccttcctcacgcaggcagcacccagcaaa
gcagccttgctcatctgccagtcccacctgacgggagcgctggccagcaccagggcctcg
gtcggcaagcaggactggaagaagtaccacgagctgtatgatgcttttaggaacacctgt
gaaggcaggactcaaggcccacccaccacaaaacctggtcaaagagtgactttagcatag
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