Lepisosteus oculatus (spotted gar): 102687510
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Entry
102687510 CDS
T07349
Symbol
tfdp1
Name
(RefSeq) transcription factor Dp-1
KO
K04683
transcription factor Dp-1
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03083
Polycomb repressive complex
loc04110
Cell cycle
loc04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
102687510 (tfdp1)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
102687510 (tfdp1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
102687510 (tfdp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
loc03000
]
102687510 (tfdp1)
03036 Chromosome and associated proteins [BR:
loc03036
]
102687510 (tfdp1)
Transcription factors [BR:
loc03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
102687510 (tfdp1)
Chromosome and associated proteins [BR:
loc03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
102687510 (tfdp1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
Baculo_PP31
Motif
Other DBs
NCBI-GeneID:
102687510
NCBI-ProteinID:
XP_006639259
Ensembl:
ENSLOCG00000009902
LinkDB
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Position
LG17:27433829..27460069
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AA seq
408 aa
AA seq
DB search
MAKDAGLIEANGELKVFIDQNLSPSKGVVSLVAVHPSTVTMGKQLLPKTLGPSNVNITPH
MVISTPQRPAGTNAILVGSSNTPGGQFLTQSQAGDALPWPTGKRSKKGEKNGKGLRHFSM
KVCEKVQRKGTTTYNEVADELVAEFSNTDSHISPSDSHVYDQKNIRRRVYDALNVLMAMN
IISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRN
RQAEQQMSRPPPPNSLIRLPFIIVNTSKNTVIDCSISSDKFEYVFNFDNMFEIHDDIEVL
KRMGMAYGLESGKCSPEDLKAAQSLVPKALEPYVIEMAQGSISSVYSSVGVSSNGGQYHT
GSDSGADGTMASSSNGSHYSGSRVETPVSYMGDDDDDEDDYDENDDEE
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggatgctggcctaattgaagcaaatggagagttgaaggttttcattgaccaa
aatctcagtccgagtaaaggtgtggtgtcgctggtggctgttcatccctccacggtcacc
atggggaagcagctcttgccgaagacgcttgggccctccaacgtcaacatcacaccgcac
atggtgatcagtaccccgcagcgacccgcgggtacgaacgccatcctggtgggcagctcc
aacacgcccggcggccagttcctgacgcagagccaggcgggcgacgccttgccgtggccc
acggggaagcggagtaagaaaggcgagaagaacggcaaagggctcaggcacttctccatg
aaagtgtgcgagaaggtccaaaggaaaggaaccacgacctacaacgaggtggcggatgag
ctcgtggccgagttcagcaacaccgacagccacatttcacccagcgactcgcatgtctat
gaccagaagaacattagacgcagagtctatgatgccttaaacgtgctgatggcaatgaac
atcatctccaaggagaagaaggaaatcaaatggataggacttcccaccaactcagctcag
gaatgtcagaatttagaggtggagagacaaaggaggcttgaaaggataaagcagaagcaa
tcccaactgcaagagctcattttacagcaaattgcctttaaaaacctcgtccagagaaac
cgccaggcggagcagcagatgagcaggccccctcccccaaactcgctcatacgcctgccg
ttcatcatcgtcaacaccagcaagaacacggtcatcgactgcagcatctctagtgacaag
tttgaatacgtgtttaattttgacaacatgtttgagattcacgatgacatcgaggtgctg
aagcggatggggatggcctacggtttggagtcggggaaatgctctccggaagacctcaaa
gcagcccagagcctggtgcctaaagctctggaaccatacgtcatagaaatggctcaggga
tcaataagcagcgtgtacagttctgtaggtgtgtcctctaacggtggccagtatcacact
ggcagcgacagcggagcagacgggacaatggcatccagctcgaatggctcccactacagt
ggctcccgggtggagacgcccgtgtcctacatgggagacgacgacgacgacgaggacgac
tatgacgagaacgacgacgaagagtaa
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