Lepisosteus oculatus (spotted gar): 102687607
Help
Entry
102687607 CDS
T07349
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1-like
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
102687607
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
loc04040
]
102687607
Ion channels [BR:
loc04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
102687607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans_2
Ion_trans
Lig_chan
TrkA_N
Motif
Other DBs
NCBI-GeneID:
102687607
NCBI-ProteinID:
XP_006625608
Ensembl:
ENSLOCG00000015332
LinkDB
All DBs
Position
LG1:9178412..9199510
Genome browser
AA seq
1021 aa
AA seq
DB search
MAEATGDLLPISHPLCFYRGRRLWWAYLTSSLLIFLGGGLAIMLWRACHRAFRVQQQPLY
HRKGPQEELRGAVKEWAIALLSAQTRTGRVLMVLVFLFNIGSLITYFILSQELVESCQLS
YDPVFLIDMGFNIFYLLYFGLRLVAAQDLLRFWVEVNSVVDFFTVPTSFIYLYTQRNWLG
LRFLRVLRLIEFPTILQILNILTSNNSLKLSRLIAMILSIWLTAAGFIHLVENSGDPWLA
FSNAHNMSYFDCVYFLMVTMSTVGYGDVEVHTTLGRLFIIFFITMGLALFASYVPEIVEI
ISNRKRFAGSYTVVSGRKHVVVCGNITLASASYFMKEFLHEDRGVVNVKVLFLGNFCPDP
ELEAFFRRNFLQTTFFQGSVLEHQDLERVQMCKADACIILSNRFCEDPQTEDTSNLMRVI
SVKQYCPDTRVIIEMLQHNSKAHLQNIPHWDYSRGDSVICLAELKLGFMAQSCLVPGLST
LLANLFTMQGEIEMHKETWRAHYMAGLYNEVYTEYLSSAFMGMSFCEASKLCFLRLNLLL
IGIEYWTEDEESSVVVNPLSCIKLPERTLGFFIASNASDAKRASLFCSRCHSDVTALSQL
RRCSCSAQNRAGRAVLGHRLRARRHTLGVIPSLPHRVPMEHLHAQKEEGQLDSTGMFHWC
PPVSLQEATLTRQSAQELQLEGHVLVCVFGDERSSLLGLRDFMMPLRASNLTAAELRTVV
FLGSHAYFQREWPSIHYFPKLLFLSGSPLCRADLRALAVERCAMCVVLSPQRACVSEPSL
QDKEAILACVNLHCMSFLDSPPRQPGGQAGAELCRKRSLVTTGAEIPLLMELANSSNVQF
VNEVDSLEGFSDLHLTQAFSSGMVFSEEVLDSLISATYFNKNMPALICTLVTAGATPSLE
VKLAEENVLDGGSPPLLTSPLRQRSKIAQLSLQEEPFAHFSCGNFKELFCQAIDSAGILC
FGLYRLFDPPNPARKRFVITNPAPDFPLNPDDKVFCAIPFHQSHLLARQSTAAFPPLHQH
P
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggccacaggagacttactgcccatctcccaccccctgtgtttctaccgcggc
cggcggctctggtgggcctacctgacctcctcgctgctgatcttcctgggcggcggcctg
gccatcatgctctggagagcgtgccacagggccttcagggtgcagcagcagcccctgtac
cacaggaagggaccccaggaggagttgaggggcgcagtgaaggagtgggccatagccctc
ctgtctgcgcagacccggaccgggagagtgctgatggtgctggtgtttctcttcaacatt
ggctcactcatcacctatttcatcctctctcaggagctggtggagtcttgccagctgagt
tatgaccccgtcttcctcatcgacatgggcttcaacatcttctacctcctgtacttcggc
ctccggctggtggcagcgcaggacctgctccgcttctgggtggaggtgaactctgttgtg
gatttcttcactgtgcccacctccttcatctacctgtacacccagcgcaactggctcggc
ctgcggttcctgagggtcctgcgcctcatcgagttccccaccatcttacagatcctcaac
attctgaccagcaacaactctctcaagctgtcccgcctcatcgctatgatcctgagcatc
tggctgaccgcagctggcttcatccacctggtggagaactcaggggacccctggctggcc
ttctccaatgcccacaacatgtcctactttgactgcgtctacttcctgatggtgaccatg
tccacagtgggctatggggatgtggaggtccacaccaccctgggccgcctgttcatcatc
ttcttcatcaccatgggcctggccctttttgccagctatgttcctgaaatagtggaaatt
atcagcaaccggaagagatttgccgggagctacactgtagtcagcgggaggaagcacgtg
gtggtgtgcggaaacatcacgctggccagtgcctcctacttcatgaaggagttcctgcat
gaggatcgaggggtggtcaacgtgaaagtgctcttcttgggaaatttctgcccagaccca
gagctggaggcctttttcaggcggaatttcttacagacgacctttttccagggctcagtc
ctggaacatcaggacctggagcgagtgcagatgtgcaaagcagatgcctgcatcattctg
tccaacaggttttgcgaagacccacagacagaggacacgtcaaacctcatgagggtgatc
tctgtgaagcagtactgccctgacactcgagtcatcatcgagatgttgcagcacaacagc
aaggcacacctgcagaacatcccacactgggactacagccgtggagactctgtgatctgc
ctggccgagctcaagttgggcttcatggctcagagctgcctggtgcccgggctgtccaca
ctgcttgccaacctcttcaccatgcagggcgagatcgagatgcacaaggagacctggcgt
gcacactacatggcagggctctataacgaggtctacactgagtacctgtccagcgccttc
atggggatgtccttctgtgaagccagcaagctgtgctttctcagactgaacctgctgctc
atcggcatcgagtactggactgaagatgaggagagcagcgttgtagtgaatccgctcagc
tgcatcaaactgccagaaaggaccctgggcttcttcattgccagcaatgccagcgatgcc
aaaagggccagcctgttctgctccaggtgccacagtgacgtcaccgccctcagccagctg
cgcaggtgctcctgctccgcccagaacagagctggcagggcagtgctgggacacaggctg
agggcgcggcgacacacgctaggagttatcccctctttgccacacagagtgcccatggaa
cacctgcatgctcagaaagaggagggccagctagattccactgggatgttccactggtgt
ccccctgtctccctgcaggaggccaccctgacgaggcagtccgcgcaggagctgcagctg
gagggccacgtgctggtgtgcgtgtttggggacgagcgctccagcctgctggggctccgg
gacttcatgatgcccctccgagccagcaacctcaccgccgccgagctgcgcactgtggtg
ttcctggggtcccacgcctacttccagcgcgagtggccctccatccactacttccccaaa
cttctcttcttatcgggctccccgctgtgccgcgctgacctgcgggcgctggcggtggag
cgctgcgccatgtgcgtggtgctcagcccccagcgggcctgcgtgtccgagccctcgctg
caggacaaggaggccatcctggcctgcgtcaacctgcactgcatgagcttcctggacagc
ccacccaggcagcccggaggacaggcgggggcagagctgtgcaggaagcgatcccttgtg
acaaccggagcagagatccccctcctcatggagttagccaacagctccaatgtgcagttt
gtgaatgaggtggacagtctggagggcttcagtgacctgcacctgacccaggccttctcc
agtggcatggtcttctccgaagaagtgctggactccctcatatctgcgacctacttcaat
aagaatatgccagctctgatctgcactctggtgacggccggggccacgccctctctggaa
gtcaagctggcggaggagaacgtcctggatggaggctctccccccctgctgacatcacca
ctgcgccagcgttccaagattgctcagctgtccctgcaagaggagccctttgctcatttc
tcttgtggaaacttcaaggagctgttctgtcaggcgattgactccgcagggatcctgtgc
tttggtctgtaccgcctctttgacccccctaaccccgccaggaaaagattcgtcattacg
aacccggcaccagatttccctttaaaccccgatgacaaagtcttctgtgccatccccttc
caccagagccacctgctggcacgccagagtactgcagctttccctcctctccaccagcac
ccgtag
DBGET
integrated database retrieval system
