Lepisosteus oculatus (spotted gar): 102687830
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Entry
102687830 CDS
T07349
Symbol
poc1a
Name
(RefSeq) POC1 centriolar protein homolog A isoform X1
KO
K16482
centriolar protein POC1
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
loc03036
]
102687830 (poc1a)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
loc03037
]
102687830 (poc1a)
Chromosome and associated proteins [BR:
loc03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
102687830 (poc1a)
Cilium and associated proteins [BR:
loc03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
102687830 (poc1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR3_2nd
WDR55
WD40_CDC20-Fz
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_EML
Beta-prop_Aladin
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
WD40_RFWD3
DSE1_N
CFAP251_N
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_NOL10_N
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_NWD2_C
Ge1_WD40
eIF2A
ASA1
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_DCAF4
PAC11
Tricorn_2nd
Beta-prop_Nup120_160
RMC1_N
Beta-prop_NUP159_NUP214
Beta-prop_DCAF12
Beta-prop_WDR75_2nd
PROPPIN
Beta-prop_ACSF4
Cytochrom_D1
Beta-prop_IP5PC_F
Beta-prop_VPS8
Beta-prop_At4g14310
Motif
Other DBs
NCBI-GeneID:
102687830
NCBI-ProteinID:
XP_015203504
Ensembl:
ENSLOCG00000013801
LinkDB
All DBs
Position
LG5:complement(45973867..46028342)
Genome browser
AA seq
451 aa
AA seq
DB search
MSSALEDPTLERHFKGHRDTITSVDFNCNMKQIATGSMDSCLMIWNMKPQMRAYRFVGHK
DAVMSVQFSPSGHLVASASRDKTVRLWVPSVKGESTVFKAHTGTVRSVSFSSDGQSLVTA
SDDKTVKVWTVHRQKFLFSLNQHINWVRCAKFSPDGRLIVSASDDKTIKIWDKTSRECIH
SFYEHGGYVNYTDFHPSGTCIAAASTDNTVKVWDIRTSKLLQHYQVHSAVVNGLSFHPSG
NYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRAGNYFASGGSDEQVMVWKTN
FDTADYGEVLRLQQRSTSVNGATQTEDRQSRTSRRVPAQSHREEPPEAVDVLEIPVSHQE
KRSQSVSRASQIERDPGVKSSSSQQQTAETGISAALASTLEHIVGQLDVLTQSSSSPLRD
EKKTRTLKKLADSGYLGTEADIDRRQTERVH
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccgctttggaggatccaacattagaaaggcattttaaaggccacagagacacc
atcaccagtgttgacttcaactgcaacatgaagcaaatcgccactggctccatggactcc
tgtctgatgatctggaacatgaagcctcagatgagggcgtatcgctttgtgggtcacaag
gatgcggtgatgtccgtgcagttttctccatcgggacacctggtagcatctgcatccagg
gacaaaaccgttcgcctttgggtgccaagtgtgaagggagagtcaacagtgttcaaagct
cacacagggacagtgcggagtgtcagtttctccagtgatggacagtctttggttacagcc
tcagatgacaagactgtcaaagtctggacagtgcatcggcagaagttcttgttctctctg
aaccaacacatcaactgggtccgctgtgccaagttttcacccgatgggcgactgatagtc
tcagcaagtgatgacaaaactataaaaatatgggacaaaaccagccgtgagtgtatccac
tcattttatgagcatggaggctatgtaaattacacagatttccaccccagcggcacgtgc
attgcagctgccagcacagataacaccgtcaaagtgtgggacatccgaaccagtaaactg
ctccagcattaccaagtgcacagtgccgtagtgaatgggctttcattccatccctctggg
aactatctcatcactgcctccaatgactccacactgaaaatactagatttattggaagga
aggctactgtacacacttcatggccatcagggccctgctacgtgtgtggccttctccagg
gccgggaattacttcgcctcaggtggctcagatgaacaggtcatggtgtggaaaactaat
tttgacactgcagattacggggaggtgttgagattgcaacagagatccacgagtgtgaac
ggggctacccagactgaggaccgacagtcaaggacatcgcggcgtgtcccagcacagtcc
cacagagaggagcccccagaagctgtagacgtcttggaaattcctgtttctcatcaggaa
aagaggagtcaaagcgtaagcagggcttcccagatcgaaagagaccctggagtcaaatct
tccagctcccagcagcagactgcagagacaggaatctcggcggccctggccagcactttg
gagcacattgttggtcagcttgatgtccttactcagagcagttcgtcacccctgagagac
gagaagaaaacacggacattaaagaaattggctgacagtggctatcttggaacagaggct
gacattgacagaagacaaactgagagagtgcattga
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