Lepisosteus oculatus (spotted gar): 102687936
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Entry
102687936 CDS
T07349
Symbol
tuba3e
Name
(RefSeq) tubulin alpha-3E chain
KO
K07374
tubulin alpha
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04145
Phagosome
loc04210
Apoptosis
loc04517
IgSF CAM signaling
loc04530
Tight junction
loc04540
Gap junction
loc04814
Motor proteins
loc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102687936 (tuba3e)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102687936 (tuba3e)
09143 Cell growth and death
04210 Apoptosis
102687936 (tuba3e)
09144 Cellular community - eukaryotes
04530 Tight junction
102687936 (tuba3e)
04540 Gap junction
102687936 (tuba3e)
09142 Cell motility
04814 Motor proteins
102687936 (tuba3e)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102687936 (tuba3e)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loc03019
]
102687936 (tuba3e)
03036 Chromosome and associated proteins [BR:
loc03036
]
102687936 (tuba3e)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
loc04812
]
102687936 (tuba3e)
04147 Exosome [BR:
loc04147
]
102687936 (tuba3e)
Messenger RNA biogenesis [BR:
loc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102687936 (tuba3e)
Chromosome and associated proteins [BR:
loc03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
102687936 (tuba3e)
Cytoskeleton proteins [BR:
loc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
102687936 (tuba3e)
Exosome [BR:
loc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102687936 (tuba3e)
Exosomal proteins of other body fluids (saliva and urine)
102687936 (tuba3e)
Exosomal proteins of colorectal cancer cells
102687936 (tuba3e)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin_C
Tubulin
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
102687936
NCBI-ProteinID:
XP_006625445
Ensembl:
ENSLOCG00000014394
LinkDB
All DBs
Position
LG1:504018..506929
Genome browser
AA seq
415 aa
AA seq
DB search
MPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITG
KEDAANNYARGHYTIGKEIVDLVLDRIRKLSDQCTGLQGFLIFHSFGGGTGSGFASLLME
RLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR
NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV
ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATI
KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF
DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEGEAEEGEEL
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcgacaagaccatcggcggcggagacgactccttcaacaccttcttcagtgag
accggggcgggcaagcacgtgcccagggccgtgttcgtggacctggagcccacggtggtt
gatgaggttcgcacggggacctaccggcagctgttccaccctgagcagctcatcactggc
aaggaggatgcagcaaacaactacgcccgtgggcattacaccatcggcaaggagattgtg
gacctggtgctggatcgcatccgcaagctgtctgaccagtgcacgggcctgcagggtttc
ctcatcttccatagctttggaggcggaactggctctgggtttgcctctctgctcatggag
aggctgtctgtggactacgggaagaagtccaagctggagtttgccatctaccctgcgccc
caggtgtccaccgctgttgtggagccgtacaactccatcctgaccacccacaccaccctg
gagcactcggactgcgcgtttatggtggacaatgaggcaatctatgatatctgccgccgt
aacctggatatcgaacggcctacctacaccaacctcaaccgcctgattggccagattgtg
tcttccatcactgcatccttgcgctttgacggtgctctcaatgtggatctgacagagttc
cagaccaatctcgtcccttaccctcgcatccacttccccctggtcacctacgcccctgtc
atttccgctgaaaaagcctaccatgagcagctctccgtggccgagatcaccaacgcctgc
ttcgagcctgccaatcagatggtgaagtgtgacccccgccatggcaagtacatggcctgc
tgcatgctgtaccgtggggatgtggtgcccaaagacgtcaatgctgccatcgccaccatc
aagaccaagagaaccatccagtttgtggactggtgtcccactggcttcaaggttggcatc
aactaccagccgcccacagtggtgccggggggtgatctggccaaggtgcagcgggctgtg
tgcatgttgagcaataccactgctatagcggaggcctgggcgcgcctggatcacaagttc
gacctgatgtacgctaagcgggcatttgtccactggtatgtgggtgagggcatggaagag
ggggagttctcggaggcgcgggaggacctggcagcgctggagaaggattatgaggaggtg
ggcgtcgattctgtggagggagaggctgaggaaggagaggagctgtga
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