Lepisosteus oculatus (spotted gar): 102688032
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Entry
102688032 CDS
T07349
Symbol
sec24d
Name
(RefSeq) protein transport protein Sec24D
KO
K14007
protein transport protein SEC24
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102688032 (sec24d)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
loc04131
]
102688032 (sec24d)
Membrane trafficking [BR:
loc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
102688032 (sec24d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
Gelsolin
zf-Sec23_Sec24
GDP_Man_Dehyd
Motif
Other DBs
NCBI-GeneID:
102688032
NCBI-ProteinID:
XP_006630063
Ensembl:
ENSLOCG00000012522
UniProt:
W5N473
LinkDB
All DBs
Position
LG4:complement(58382353..58425804)
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AA seq
1034 aa
AA seq
DB search
MSQPGYVATPPYSQAQPGIAGYPSGFGSAPSQTLYGHYGGPPQSFSPSQPGALKPSGPAA
SGMPSPPGPNQFSPNNLQNGAHSQRFPPSPAVSAPSLSPYGQHPQAPYQNSPIPAPTQQL
TSQMNSMQISGYGHGPMQGSQPPPSPAAQQGFQTSLPQTMSHPPLPPGSQASPIASSSFT
SGAHPMGAMSSVSPMGTTVPFSGPHPGNVGFQPPTAQSGPHGFLPQQGSYGGQMAGAQPG
FPGSFPAGAASQMAGPPQKKLDPDSIPSATQVIQDDQARRGGQIYATNIRGQVPPLVTTD
FDVQDQGNASPRFMRCTAYSFPCTSDLAKQCQVPLATIIKPFATIPKNETPLHVVNHGET
GPLRCNRCKAYMCPFMQFIEGGRRYQCGFCSCVNEVPPFYFQHLDHIGRRVDFYERPELS
LGSYEFVATLDYCKNNRPPSPPAFIFMIDVSYSNIKSGLVKLVCDELKTLLEKLPREEHA
ESSAIKVGFVTYNKILHFYNVKSNLAQPQMMVVSDVAEMFVPLLDGFLVNFHESRSVINN
LLDQIPEMFADTNESETVFAPVIQAGMEALKAAECSGKLFIFHSSLPTAEAPGKLKNRDD
RKLVNTEKEKILFQPQKGVYEQLTKECVSSSCCVDLFLFPTQYVDVATLGAIPLHTGGTL
YKYSNFQIQADGEHFLSDLRKDVEKPIGFDGIMRIRTSTGFRATDFFGAIYMNNTTDVEM
AGVDCDKAVTVEFKHDDTLSEDSGALVQCALLYTTIGGQRRLRIHNLSLNCTSQLADLYK
SCETDALINFFAKSAYRAMLNQPLKTVREILVSQSAHMLACYRKCCASPSAASQLILPDA
MKIFPVYMNGLMKSSALVGSPELSTDERAYHRQLVMSMDVADTQVYFYPRLMPVHNVDVS
SDVMPSPVRCSEERLSDGGIFLLENGQNMFLWLGQSCPPELIQSIFNVPSFAHISTEANS
LPELDNPYSKKLRFIIDCITLQRPHSMKLVIVKQKDKPEMLFRQFLVEDKGLHGGASYMD
FLCYVHREIRQLLT
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaacctggctatgttgcaacaccaccgtactctcaggcccagcctggcattgca
ggatatccctctggctttggatctgcaccttctcagaccctatatggacactatggggga
ccacctcagtcattctctccatcacaaccaggagcactcaagccatcaggtcctgcagct
tctggtatgccttctccaccaggcccaaaccagtttagccctaacaatctacaaaatgga
gctcactcccagaggtttcctccatctccagctgtttctgctccttccctttcaccatat
ggacaacatcctcaagccccctatcaaaactcccccattccagcacccacacagcagctg
accagccagatgaattcaatgcaaataagtggatatggacatggcccaatgcaaggttct
caaccccctcctagcccagctgcacagcagggtttccagacttctctgccacagactatg
tcacatcctccattgccaccaggttcacaggcctctccaattgcatcatcatcgtttaca
tctggagcccatcctatgggtgccatgtcttcggtttctccaatgggaacgacagtccct
ttctcaggacctcatccaggaaatgttggatttcagcctcccactgcacagtcaggacca
catggttttctcccacagcaaggttcatacggagggcagatggcaggagctcagccaggg
tttcctggctcttttccagctggggccgcctcacaaatggctggccctccacagaagaag
cttgaccctgactctattcctagtgctactcaagtcattcaggatgatcaagcacggaga
ggagggcagatctacgctacaaacatcaggggtcaagttcctcccttggttaccactgac
tttgatgttcaggatcaagggaatgcaagtcctcggtttatgcgctgcacagcgtactcc
tttccctgcacatcagatcttgccaagcaatgtcaagttcctctcgctaccatcattaag
ccttttgccaccattccaaaaaatgagactccgctacatgttgtgaaccatggggagact
ggaccccttcgctgtaaccgttgcaaagcctacatgtgtcccttcatgcagttcattgaa
ggcggtcggcgatatcagtgcggcttctgcagctgtgtgaacgaagtgccaccattttat
ttccagcatctggatcacattggcaggagggttgacttctatgagaggccagaattatca
ctgggatcttatgaatttgtggctactttggattactgcaagaataacagaccaccaagt
cctcctgctttcatctttatgattgatgtgtcatatagtaacataaagagtggccttgtg
aaactggtatgtgatgaactaaaaacactgttggagaaacttcccagagaagagcatgca
gaaagctcagctatcaaagtcggttttgttacctacaacaagattctccatttctacaac
gtgaagagcaacctggcccagcctcagatgatggtggtatctgacgtggcagagatgttt
gtgcctctcctcgatggcttcctcgttaacttccacgaatcgcgatccgtcataaacaat
ttgttggatcaaattccagagatgtttgcagataccaatgaaagcgagactgttttcgcc
cctgttatccaggctggcatggaagctctaaaggcagcagaatgcagtggtaaactcttc
atctttcactcatccttacctactgctgaggcccctgggaaactgaagaacagggatgac
aggaagcttgtgaacactgaaaaagagaagattctgttccagcctcagaagggtgtttat
gagcagctcaccaaagagtgcgtctccagcagctgctgtgtggatctgttcctattcccc
acccagtatgtggatgtggccaccctgggggccatcccattacacaccggagggactcta
tacaaatacagcaatttccagatccaggccgacggggagcattttctgagtgacctaaga
aaagatgttgaaaagccaataggatttgatggtatcatgcgcattaggacaagcacaggc
ttcagagccactgacttctttggtgccatttatatgaacaacaccactgatgtggagatg
gcaggagtggactgtgacaaagcagtcactgttgagttcaaacatgatgacacactcagt
gaagattcaggagccttagtacagtgtgctttactgtatacaacaatcggtggacagaga
cgactgcgaatccataatttgagcctcaattgcacctcacagttggctgacctttacaaa
agctgcgagacagacgcgctcattaatttcttcgccaaatcagcttaccgtgccatgcta
aaccagccactgaagacagtgagagagatcctggtcagccagtctgcacacatgctggcc
tgctataggaaatgctgcgctagcccctctgcagcaagtcagctgatcctaccagatgca
atgaagatcttcccagtgtacatgaatgggctgatgaagagctctgccctagtaggaagc
cctgagctctccactgatgaaagagcttatcacagacagctggtcatgtccatggatgtg
gcagatacccaggtctacttctacccaagactcatgcccgttcacaatgtggatgtgagc
agtgatgtgatgccctctcctgtgcgctgctcagaagagcgactgtctgatggaggcatt
tttctgctggagaatggacagaacatgttcctgtggctgggccagtcctgtcctccagag
ctcatccagagcattttcaacgtgccatcatttgcacacatcagcacagaagcgaattca
ttaccggaactagataatccctactctaagaagctcaggttcattattgactgcatcacc
ctgcaaaggcctcattcaatgaagcttgtcatagttaagcagaaagataaaccagagatg
cttttccgtcagttccttgtagaagacaaaggtttacatggaggagcttcatatatggat
ttcctgtgctacgtacaccgagagatcaggcagcttcttacctaa
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