Lepisosteus oculatus (spotted gar): 102688186
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Entry
102688186 CDS
T07349
Symbol
col14a1
Name
(RefSeq) collagen alpha-1(XIV) chain
KO
K08133
collagen type XIV alpha
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
loc00535
]
102688186 (col14a1)
Proteoglycans [BR:
loc00535
]
Extracellular matrix (ECM) proteoglycans
Others
102688186 (col14a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
DUF4959
Pur_ac_phosph_N
VWA_3
Fn3_nematode
MUCL1
Motif
Other DBs
NCBI-GeneID:
102688186
NCBI-ProteinID:
XP_015213293
Ensembl:
ENSLOCG00000009194
LinkDB
All DBs
Position
LG11:30450212..30557524
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AA seq
1855 aa
AA seq
DB search
MKVFGLRIRTWCPLVFLAVAAHFTIQAQGQVVAPRRLRFKVLSPGRLLVTWKSPRGDFER
YRFIYYTESGGKAHELQLSKGDNRVIIEGFLPNKEYTAKVIAVNGNQESKPLQGRFMAKD
SEHEEDLQPHKRKDTSAVEDENEILGDSQFVCKTPAIADIVILVDGSWSIGRINFRLVRM
FLENLVSAFSVGSDKTRIGLAQYSGDPRIEWHLNAYNTKDAVIDAVKNLPYKGGNTLTGL
ALTYILENSFKPESGSRPGVPKIGILITDGKSQDDVIPPARSLRDAGIELFAIGVKNADE
NELKAIASDPDETHVYNVADFNIMSSIVESLTKTVCDRVEEQDKEIKGVSGGQASLGAPQ
NLVTSEVTARSFRVTWTHAPGKVEKYRVVYYPTQGGQPEEAVVDGSENTVVLQYLNSLTE
YQIAVFAVYTSAASEGLRGSETTLALPMVNDLQLYDVTHSTMRARWRGVEGASGYMILYA
PLTEADVADEKEVKVAESVNDIELEGLTPETEYTVTVYAMFGEEASDPVTNQETTLPLIP
PRNLEFSNVDHSSARLKWDAASKKARGYRIMYVKTDGVQTNEVEVGEVTSHVLRNLTSLT
EYTVAIFAIYDEGQSEPLTGSFTTKPVPTPLNLETSEVSTNSFRVRWEHPASDVVLYRLS
WTSMTDGETKEMLLNGYSNTYVLNNLLPTTEYEVSLSAVFRDETESDAVAALETTLTMTT
TTATTTTTTTTTVVRNGVRNLLVDDETTFSMQVSWDIPDQNVRQFRVSYVTLRGDRAEEA
VLVPGRQNSLLLQPLLSDTEYRVTVTPVYADGEGTSMSSVGRTLPLSAPRNLRVSEEWYN
RFRITWDTPPSPTMGYRIVYQPVSAPGPALETFVGDDVNTMLILNLLSGTEYSVKVIASY
TTGSSDALSGNAKTLYLGVTNLSTYQVRMTSMCAQWQPHRQASLYRAVLESLSNGQRQEV
TLGGGTSRHCFYDLVPNTQYKITVYAQLQDIEGPAVTVMDKTFPVPTEPPTTPPTTTPLP
TIPPAREVCKAAKADLVFLVDGSWSIGDDNFHKIIRFLYSTSGALDKIGPDGTQVAIAQF
SDDARTEFKLKSYDDKESLLDAIQRITYKGGNTKTGRAIKHVKDAIFTPEAGMRRAIPRV
LVVLTDGRSQDDVNKVSKEMQMEGYIIFAIGFADADYGELVNIASKPSERHVFFVDDLDA
FKKIEEQLVTFVCEAASATCPSVLMSGNTLAGFRMMEMFGLLENQYASVDGVSMEPGTFN
SFPCYRLHKDALISQPTKYLHPEGLPSDYTISVIFRLLPETPQEPFALWEILNKDNEPLV
GVILDNGGKTLTFFNYDYKGEFQTVTFEGPEIRKIFHGSFHKYGRLKIVCMFLCLLGIYP
PLICLCSCVPQFQLQMFDIVCSTSWASRDKCCELPGLRVEENCPAMPHACTCSQDSKGPP
GPPGTSGGPGIRGPRGERGEPGLVGPQGPAGDIGLPGPQGPPGPQGPSGLSIQGPPGSPG
EKGEKGENGPPGTQGVPGSTGSPGRDGIQGQRFAWEAQQGMPGKDGPQGQQGPPGPIGSP
GAPGSPGSSGPPGSLGDQGPPGPSGVKGEKGERGDMQSQAAVRSIARQVCEQLIQSHMAR
YNSILNHIPSQAVSVRTVPGPPGEAGRQGPPGPQGEQGPTGRPGFPGSNGQPGRPGERGF
PGEKGEKGNQGVGIQGPRGPQGPPGPPGEGRTGSQGQSGRPGNPGSPGRPGSPGPTGPAG
SPGYCDASTCMGYNVGGGYGDPTDQDIPVVQLPPNSYQTYEPTDMYDDEDPYASFRGYAQ
YPQSAYPAPNPVPPESYPSEDAIEVRSPGIQRFSRSLSRKKDKTPNQKRTLKRDS
NT seq
5568 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtttttggactcaggataaggacatggtgtcctttggtctttcttgcagtagct
gcacatttcactatccaagctcagggtcaagttgttgctccaagaagattacgatttaaa
gtgttgtctccaggcagattacttgtaacatggaagtcacccaggggagattttgaaaga
tatagatttatttattatacagaatcaggaggaaaggcacatgaattacagctctctaag
ggggataacagagtaataattgaaggcttccttcccaataaggaatatacagccaaggtt
attgctgtgaatggaaaccaggaaagcaaaccgttacaagggaggttcatggctaaagat
tctgaacacgaagaggatttacagcctcataaacggaaggataccagtgcagtagaggat
gaaaatgaaatattaggagactctcagttcgtttgcaagactccagctattgcagacatt
gtcatacttgtggatggctcgtggagtatcggcaggataaacttccgactggttcgcatg
ttcttggaaaacctggtgagcgccttcagtgtgggctccgacaaaacccgaataggtctt
gctcagtacagcggtgatccaagaattgagtggcacctcaatgcgtacaacacaaaagat
gctgtgattgatgcagtgaagaatcttccatacaaaggaggaaacaccctaacaggtctt
gcgctgacatacattttggagaacagcttcaagcctgagtctggatctaggcctggagtt
cctaaaatcggtatcctcatcactgatggcaagtctcaggatgatgttattccaccagcc
cgaagccttagagatgctgggattgaactttttgccattggcgtaaagaacgcagatgag
aatgagctgaaggccattgcctccgaccctgatgaaacccacgtctacaatgttgctgac
ttcaacatcatgagctccatcgtggaaagcctgaccaaaacagtctgtgaccgtgtcgaa
gaacaggacaaggaaattaaaggggtgtctggtggccaggcgtcgctgggagccccccag
aatctggtgacatctgaagtgacggccaggagtttccgagtgacctggacccatgcgcct
gggaaagtggagaagtacagagttgtgtactaccccacccagggaggacagccagaagag
gcagtggttgatgggagtgagaatacggtagtgttgcagtacctgaactccttgacagaa
taccagattgctgtgtttgcagtgtacaccagtgctgccagtgaaggactcaggggcagt
gagacaacattggccctgcccatggtgaatgacctgcagctgtatgatgtcactcacagc
accatgagggccaggtggagaggtgtagagggggcctctggttacatgatactttacgcc
ccactgacagaggcggatgtggcagatgaaaaggaggtgaaagttgcagaatctgttaat
gatatagaactggaggggctgactcctgaaacggaatacactgtgacagtgtatgcaatg
tttggtgaagaagccagcgatcctgtgacaaatcaagaaacgacattaccactgatccca
ccaaggaacctggagttctccaatgtagatcacagctctgccaggctcaaatgggatgct
gcatctaagaaagcacgggggtatcgcatcatgtatgtaaaaactgatggagtgcaaaca
aacgaggtcgaagttggcgaggttacatcgcatgtactgaggaacttgacgtcccttaca
gaatatacagtcgccatttttgccatctatgacgagggacaatcggagccgctgacggga
agtttcaccaccaagcctgtgccaaccccactcaatctggaaactagtgaagtatccact
aacagtttcagagtgaggtgggagcatccagcgtctgatgttgtcctatatagactttcc
tggacttctatgacagatggggaaacaaaagagatgcttttaaatggatattcgaatacc
tacgtcttgaacaacttgctgccaacaactgaatatgaggtgtcgctgtccgctgttttc
agagatgaaacagaaagtgatgctgtggctgctctggagacaacattgacaatgacaacc
accaccgctaccacaacaaccacaacaaccacaacagttgtgcgcaatggagtaagaaac
ttgctcgtagacgacgaaaccaccttcagtatgcaagtctcctgggatattcctgaccag
aacgtgcgccagttcagggtgtcctacgtcactctgaggggagaccgcgctgaagaggcg
gtcctggttcctggcaggcagaatagcctcttacttcagcccctgctgtctgacacagag
tacagggttactgtcacacctgtctacgcagatggagagggcaccagcatgtcatctgtt
ggcaggaccttgccactgtcagcaccaaggaacttgcgcgtgtctgaagaatggtacaat
cgatttcgcatcacttgggatactcccccttcacccaccatgggatacagaatcgtctac
cagcctgtctccgccccaggacctgcgctggagacttttgtcggagatgatgtcaacaca
atgctgatcctgaatctcctcagtgggactgagtacagtgtaaaagtcattgcttcctac
acaactggctcaagcgatgccctttcaggaaatgccaagacattgtacctgggagtaacc
aacctgagcacctatcaagtccgtatgacaagcatgtgtgcacagtggcagcctcaccgt
caggcttcattatacagagctgttctagaatccctgagtaatggacagagacaggaagtg
actcttggaggaggaacatctagacattgtttctatgatcttgtacccaatacccagtac
aaaatcactgtctatgcccaactccaagacattgagggaccggctgtcactgttatggac
aaaacatttccagtgccaactgagccaccgacgacaccacccactaccactcctcttccc
acaattcctcctgctagagaagtgtgcaaagctgccaaagcagacttggtctttttagtg
gatgggtcctggagtattggagatgacaacttccacaaaatcatacgctttctgtacagc
acaagtggtgcacttgacaagatcggccctgatggcactcaagttgccattgcacagttc
agcgatgatgccagaacagaattcaaactcaagtcttacgatgacaaggaatcacttctg
gatgcaattcagcgcatcacatacaagggaggaaataccaagacaggaagagccatcaag
catgtgaaggacgctatcttcactccggaggcaggaatgaggagggccattcctagagtg
ctggttgttttgactgatggacgatctcaagatgatgtcaacaaggtttccaaagaaatg
cagatggaaggctacatcatttttgctattgggtttgctgatgctgactatggagaatta
gttaatattgccagcaagcccagtgagaggcatgttttctttgtggatgatttggatgct
ttcaaaaaaattgaggaacaactggtaacctttgtctgcgaagctgcatctgcaacctgt
ccatctgttctaatgagtggcaataccttagcagggttcaggatgatggagatgtttggt
cttcttgagaaccagtatgcctccgttgatggagtgtctatggagcctggaactttcaac
agctttccctgctacaggcttcacaaggatgccctcatctcacagcccacaaagtatcta
catcccgaaggactgccctcagactacaccatctctgtaatattccgccttctgcctgaa
actccccaggagccctttgcactgtgggaaatcctcaacaaagacaacgagcctctcgtg
ggagtcatcctagacaatggcgggaaaacactcaccttcttcaactatgactataaagga
gaattccagactgtgacatttgaagggccagagatcaggaagattttccatggcagcttc
cacaagtatggtagactcaaaatagtgtgcatgtttctttgtctcctcggtatttatcct
ccgctgatctgtttgtgttcctgtgtcccccagttccagcttcagatgtttgacatagtt
tgcagtacatcgtgggccagcagggataagtgctgtgagctcccaggattgagagtggaa
gagaactgcccagccatgccacatgcgtgtacctgctctcaggacagcaaaggaccgcct
ggacccccgggaacatctggtggtcctggtatcagaggcccaagaggagaacgtggagaa
ccaggcttagtgggaccacaagggcctgcaggagacattggattgccaggaccccagggg
cccccagggcctcagggaccaagtggactttccattcaggggcccccgggttctcctgga
gagaaaggggagaagggggaaaatggcccaccaggaacacagggggtccccggatcaact
gggtctccaggaagagatggcatacagggtcagaggtttgcatgggaggcacagcaggga
atgccaggtaaagatggaccccagggacagcagggccctccaggaccaatcgggagccct
ggagctcctggatccccagggtcaagtggacctcctggatcactgggtgaccagggccct
cctggtccttctggtgtgaaaggagaaaagggtgaaaggggtgacatgcagtcccaagct
gctgttcgttcaatagcccgccaagtctgtgagcagcttattcagagtcacatggcacgc
tacaattcgatcctgaaccacatccccagtcaagccgtgtccgtgcgcacagtcccgggg
cccccgggtgaggcgggccggcaggggcctccagggccacaaggagaacagggtcccaca
ggcaggccgggattccctggtagtaacgggcaaccgggcagaccaggggagagaggtttc
cctggtgaaaagggagagaagggaaatcaaggagttggtattcagggtccaagaggccca
caaggacctccagggcctcccggagaagggcgcacagggagtcagggtcagtcaggaaga
cctggaaaccccggctctccaggacggcctggcagccccggccccaccggccccgctggc
tcccccggatactgcgatgcatcaacctgcatgggttataatgtcggaggtggatatggt
gacccaactgatcaggacattcctgtagttcagttacctcccaactcctaccaaacctat
gagcccaccgacatgtacgatgacgaggacccatatgcgtcgtttagaggttacgctcag
tacccccagtctgcctaccccgcccccaacccagtcccacctgaatcctacccctcggaa
gatgccattgaagtgagatcaccgggaatccagcgtttctccagaagcctctccagaaag
aaggacaaaacccccaaccagaagaggacactgaaaagagactcttag
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