Lepisosteus oculatus (spotted gar): 102688291
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Entry
102688291 CDS
T07349
Name
(RefSeq) alpha-actinin-4
KO
K05699
actinin alpha 1/4
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04510
Focal adhesion
loc04520
Adherens junction
loc04530
Tight junction
loc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102688291
04520 Adherens junction
102688291
04530 Tight junction
102688291
09142 Cell motility
04810 Regulation of actin cytoskeleton
102688291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
loc04131
]
102688291
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
loc04812
]
102688291
04147 Exosome [BR:
loc04147
]
102688291
Membrane trafficking [BR:
loc04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
102688291
Cytoskeleton proteins [BR:
loc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
102688291
Exosome [BR:
loc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102688291
Exosomal proteins of colorectal cancer cells
102688291
Exosomal proteins of bladder cancer cells
102688291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CH
Spectrin
Uds1
DUF7310
Motif
Other DBs
NCBI-GeneID:
102688291
NCBI-ProteinID:
XP_015196145
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All DBs
Position
LG2:complement(62871262..62900969)
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AA seq
618 aa
AA seq
DB search
MVDYHAVNNQQYSGGGTQPYMQQDDEWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQI
ENIEEDFRDGLKLMLLLEVISGERLPKPERGKMRVHKINNVNKALDFIASKGVKLVSIGA
EEIVDGNSKMTLGMIWTIILRFAIQDISVEESSAKEGLLLWCQRKTAPYKNVNVQNFHIS
WKDGLAFNALIHRHRPELIDYDKLRKDDPVTNLNNAFEVAEKYLDIPKMLDAEDIVNTAR
PDEKAIMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEHLMEEYEKLASDLLEWIRR
TIPWLENRAPERTMHEMQQKLEDFRDYRRVHKPPKVQEKCQLEINFNTLQTKLRLSNRPA
FMPSEGKMVSDINNAWHSLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKAAIHEGWTDG
KEAMLTQKDYETASLSEVKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSV
NARCQKICDQWDRLGTLTQSRRESLERTEKQLESIDELYLEYAKRAAPFNNWMEGAMEDL
QDMFIVHNIEEIQGLISAHEQFKATLPEANKERESIQGIQSEVQKIAQYNNIRLSGNNPY
TSITPQAINSQWEKVGTA
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggtggattaccacgccgtcaataaccagcagtattccggtggcggcacgcaaccttac
atgcaacaggacgatgagtgggaccgggacctgcttctcgacccggcctgggagaagcag
cagaggaagaccttcacagcctggtgtaactcccacctgcgcaaggccgggactcagatc
gagaacatcgaggaggacttcagggacgggctgaagctcatgctgctgctggaggtcatt
tcaggcgagcggctgcccaagccggagaggggcaagatgagggtgcacaagatcaacaac
gtcaacaaggccctggacttcatcgccagcaagggggtcaagctggtgtccatcggggct
gaggaaatcgtggacgggaactccaagatgaccctgggaatgatctggaccatcatcctg
cggttcgccatccaggacatctccgtggaagagagttcggccaaggaggggctgctgctg
tggtgccagcgcaagacggccccctacaagaacgtcaacgtgcagaacttccacatcagc
tggaaggacggactggccttcaacgccctcatccacagacaccggcccgagctcatcgac
tacgacaagctgaggaaggacgacccggtgaccaacctgaacaacgccttcgaggtggcg
gagaaatacctggacatcccgaagatgctggacgcagaagacattgtgaacacggctcgc
cccgatgagaaagccattatgacctatgtgtccagtttctaccatgccttctctggagct
cagaaggccgagacggcagccaatcgcatctgcaaggtgctggcggtcaaccaggagaac
gagcacctgatggaggagtacgagaagctggccagtgacctgctggagtggattcgccgc
accatcccctggctggagaaccgggccccggagcgcaccatgcacgagatgcagcagaag
ctggaggacttccgggactaccggcgcgtccacaagccgcccaaggtgcaggagaagtgc
cagctggagatcaacttcaacaccctgcagaccaagctgcgcctcagcaaccggcccgcc
ttcatgccctcggagggcaagatggtctcggacatcaacaacgcctggcacagcctggag
caggccgagaagggctacgaggagtggctgctgaacgagatccgccggctggagaggctg
gaccacctggccgagaagttcaggcagaaggccgccatccacgagggctggactgacggg
aaggaggccatgttgactcagaaggactatgagacggcctctctctcggaggtgaaggcc
ctgctgaagaagcacgaggccttcgagagcgacctggctgcccaccaggacagagtggag
cagatcgccgccatcgcccaggagctcaatgagctggattactacgactctcccagcgtg
aacgcccgctgccagaagatctgcgaccagtgggaccggctgggcaccctcacccagagc
cgccgcgagtctctggagaggacggagaagcagctggagtccatcgacgagctgtacctg
gagtacgccaagagggcggcgcccttcaacaactggatggagggggcaatggaggacctg
caggacatgttcatcgtccacaacatcgaggagatccagggcctgatctcggcccacgag
cagttcaaggccacgctgcccgaggccaataaggagcgcgagtccatccagggcatccag
agcgaggtgcagaagatcgcccagtacaacaacatccggctcagcggcaacaacccctac
acctccatcaccccccaggccatcaacagccagtgggagaaggtggggaccgcc
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