Lepisosteus oculatus (spotted gar): 102688296
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Entry
102688296 CDS
T07349
Symbol
efl1
Name
(RefSeq) elongation factor Tu GTP-binding domain-containing protein 1 isoform X1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
102688296 (efl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
loc03009
]
102688296 (efl1)
Ribosome biogenesis [BR:
loc03009
]
Eukaryotic type
Pre-60S particles
GTPases
102688296 (efl1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
RsgA_GTPase
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
102688296
NCBI-ProteinID:
XP_015198532
Ensembl:
ENSLOCG00000012862
UniProt:
W5N5D0
LinkDB
All DBs
Position
LG3:complement(38306893..38397801)
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AA seq
1143 aa
AA seq
DB search
MLVKIFENAFNFGQSGMGQTSLDKIIALQKKAANIRNICILAHVDHGKTTLADCLVASNG
IISSRLAGKLRYLDSREDEQIRGITMKSSAISLHFSSDGKDYLINLIDSPGHVDFSSEVS
TAVRLCDGAIVIVDAVEGVCPQTQAVLRQAWLENIRPVLVINKIDRLITELKLTSQEAYT
HLQKMLEQVNAVTGALFTSKVLKERAEKTDALGPCESVSGEQVYDWSSGLDESDDSQLYF
SPDQGNVVFASAVDGWGFSIQQFAQLYSQKMGIKTEVLLKTLWGDFYLNAKAKKIMKGAQ
SKGKKPLFVQLVLDNIWSLYDAVVTRRDKDKIDKMVNSLGLKVSARDSRHTDPRVLLSAI
CSQWLPVSQAVLTMVCNKLPSPLDIPAERVEKLMCVGVRTFNSLPEKTQELKRAFLECKS
EGDTPVIVFVSKMFAVDTKGLPQNKKRPLTQEEIALRREQARRRHAERLAGSQEPDSPEQ
PETGSGSVPDAAASCGESTKGVDMLSGQMETMALKANRPEEENKEHFIAFARVYSGVVRR
GQRVFVLGPKYDPAEASHKLPEGCSAADDLPSVPHLACCTLENLYLLMGRELEELEEVPS
GNVLGIGGMEEWILKSATISTSPACPPFTPLNFEATPIVRVAVEPKHPSEMPKLVRGMKL
LNQADPCAEVLIQETGEHVLVTAGEVHLQRCLDDLRQRFAKIEIGVSEPIIPFKETVIRP
PKVDMVNEDIGKQQKVAVIHQVREEQLKYPEGIQVDSNGLVTLTTSNKLATIGVRAMPLP
EEVTHLLEQSSDLIRTMEHFNLSVKEGKKALEINPKMLESIHDFKEKLESLLQGRKWRNA
VNHIWTFGPRRCGPNILLNNLEGYQRPSVWQCLDTERVEAGQYRDLDNSIVSGFQLATLS
GPMCEEPLMGVCFSVELWDMKAPQVPAAAPPPAQAAPKADSPGPAPHTAGEEALGLQAQL
AAPPSKRRSEAAVPDCYGPFSGQLIAAMKEACRYAFQAKPQRLMAAMYTCEIMATADVLG
RVYGVLSKREGRVLLEEMKEGTDMFIIKAILPVAESFGFADEIRKRTSGLASPQLVFSHW
EVISSDPFWVPTTEEEYLHFGEKADSENQARKYMNAVRKRKGLYVEEKIVEHAEKQRTLS
KNK
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtgaaaatatttgaaaacgcatttaatttcgggcaatccggaatggggcagacc
agtttagacaaaatcattgcacttcagaaaaaagcggcaaatatcaggaatatttgcatt
ttagcacatgtggatcatgggaaaacaacattagcagattgcctggttgccagcaatggt
atcatctctagtcggttagcaggaaagctcagatacttggatagcagagaagatgaacag
attcggggaattacaatgaaatccagcgcaatatcactgcacttttccagtgatggaaaa
gactacctcatcaacctgattgattctcccggtcatgtggacttttcctctgaggtgtcg
acagcagtccggctgtgtgatggggccattgtaattgtggacgctgtggaaggagtgtgt
cctcagacacaagccgtgttacgacaagcctggctggaaaacatccgtcctgtgttagtg
atcaataaaatcgacagactgataactgaactgaaactaacctcccaggaggcctatact
caccttcagaaaatgttggaacaggtgaatgcagtgactggggctctgttcacctccaaa
gtcctgaaagaaagagcagaaaagacggatgccctggggccctgtgaaagtgtgagtgga
gagcaggtgtatgactggagctctggcctggacgagtcagatgactcccaactctacttc
tcccctgaccagggcaacgtggtcttcgccagtgccgtagatggatggggcttcagcatc
cagcagtttgcccagctgtacagtcagaaaatggggatcaagactgaagtgctgctcaaa
accctgtggggagatttttacctcaatgccaaagcaaagaagatcatgaagggagcgcag
tcaaaagggaaaaagcccctatttgttcaacttgtcctggacaacatttggagtttatat
gatgctgttgttaccagaagagacaaagataaaattgacaagatggtgaactccctgggt
ttgaaagtatctgcgagagactcgaggcacactgaccccagagtgctcctcagtgccatc
tgcagtcagtggcttcctgtctcacaggctgtgctcaccatggtgtgtaacaagctcccc
agtcctctagacatccctgcggaaagggtggaaaagctaatgtgtgttggagtgagaacg
ttcaattctctacctgagaaaacccaagagctcaaaagagcattcctggagtgtaagagc
gagggcgacacgccagttattgtgtttgtctccaagatgtttgctgttgacacaaaggga
ttgccacaaaacaagaagaggccattgactcaagaggaaatagctctgcggagggagcag
gccaggcggagacatgcagagagactcgcgggctctcaggagccagacagcccagagcag
ccagagacggggtctgggtctgtgcctgatgcagcagcgtcctgtggggagagcaccaaa
ggagtggacatgctttctggtcagatggagaccatggccctgaaagctaacaggccagag
gaggagaacaaggagcactttattgcctttgccagggtgtacagtggggtggtgcggaga
ggccagagggtgtttgttttgggtcccaaatacgatccggctgaagcttcacacaagctg
ccggaaggctgttctgctgcagatgatctcccatcagtacctcacttggcttgttgcaca
ctggagaatctctacctgctgatggggagagaactagaggagctggaagaggtgccctca
ggcaatgtgctcggtattggagggatggaggagtggatattgaagtcagccaccatatca
acctctccagcctgtcctcccttcaccccactcaattttgaggccacgcccatcgtccgt
gtagctgtggagcccaagcatccaagtgagatgccaaagctggtacgtggaatgaagcta
cttaaccaggctgacccctgcgctgaggtgctcatccaggagactggggagcatgtgctg
gtgacggcaggagaggtccacctgcagcgctgcttggatgacctgagacagaggtttgcc
aagatagaaatcggtgtatctgaacccatcatcccatttaaagagactgtcatccgccct
ccgaaggtagacatggtgaatgaagacattgggaagcagcagaaggtagctgtgatacac
caggtgagagaggagcagttaaagtatcccgaaggcatccaggtcgattctaacgggctg
gtcacactcactacttccaacaagctggctaccatcggggtcagggccatgccactgcca
gaagaagtcacccatctactggagcagagcagcgacctcatccgcacaatggagcacttc
aacttatccgtgaaggagggcaagaaagcccttgagatcaatccgaaaatgctggagtct
attcatgacttcaaggagaagctggagtctctgttacaaggacggaaatggaggaatgct
gtcaaccacatttggacatttgggcctcggcgatgtggccctaatattttactcaataac
ctggaaggctaccagcgtccctcagtgtggcagtgtctagacacagagagggtggaggct
gggcagtaccgtgatttggacaacagcatagtcagtgggttccagctggccacactttca
gggcccatgtgtgaggagcctctgatgggagtttgcttttctgtggagttgtgggacatg
aaagccccgcaggtccctgccgcggcgcccccacctgcacaagcagcccccaaggccgac
agccccggccccgctcctcacaccgccggcgaggaagctctggggctgcaagcccagctc
gctgcgccgcccagcaaacgcagaagtgaagcggccgtccctgactgctacgggccgttc
tcggggcagctcatagcagccatgaaggaagcctgtcgatatgccttccaggcaaaaccc
cagcgcctcatggccgcgatgtacacctgtgaaatcatggccaccgcagacgtactaggt
cgcgtctacggcgtcctgtccaagagagaaggccgcgtgctgctggaggagatgaaggaa
ggcacagacatgttcatcatcaaggccatcctcccggtcgcggagagcttcggctttgcc
gatgagatccggaaacggacgagcggcttggccagtccccagctggtgtttagccactgg
gaggtgatctcaagtgacccgttctgggtgcctaccacagaagaggagtacctgcacttt
ggggagaaggcagactctgagaaccaggcacgcaaatacatgaatgctgttcgcaagcgc
aaagggctgtatgtggaagagaagattgtggaacatgcagaaaagcaaagaactctaagc
aaaaacaagtag
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