Lepisosteus oculatus (spotted gar): 102688379
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Entry
102688379 CDS
T07349
Name
(RefSeq) desmoglein-2-like
KO
K07597
desmoglein 2
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04382
Cornified envelope formation
loc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102688379
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
102688379
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
loc04515
]
102688379
Cell adhesion molecules [BR:
loc04515
]
Cadherins
Major cadherins
102688379
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
RET_CLD1
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
102688379
NCBI-ProteinID:
XP_015209349
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Position
LG9:complement(13780110..13809265)
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AA seq
1068 aa
AA seq
DB search
MAGTSLAGVGLQLLVMLLVFQKQLEANENVQLKRQKRAWIIPPLRIPENEDYTKREYIGK
IRSDFESKQTIFYEIKGKGADEEPMNIFVVDRVRGTIRVNDILDREEIAVYNLTGIAFDQ
SYKAVEENINLTIVVVDKNDCPPVFKINQVGEIKELSAKGTPVMQVIATDDDDPATDHAK
IKYSIVSQSPPEPQMFYIDEDTGMVYVQKATLDREMIDSYTLVVQGRDMDGAITGNTGEG
DIQIKILDVNDNVPTLEKEEFSAIVEENTANIEVMRLKALDKDLEFTDNWETEFEIVSGN
EAGYFTIVKGSQANEAIVMLNKALDYEEMQNVDIAVALRNKAAYYSEAGMVFGSGLGKSY
PIKIQVKNQPEGPRFSPKVKAISISEDKKKLNISRVIAKYPAINGDTGKPAERVRYAKAF
DPDNWLSIDEKTAEIKLNKLPDRESKQLINGTYYAKILVMTEDFPAKTTTGTIAIQVEDH
NDHCPVLTSTSQVLCNKSRAAFITAEDGDIDPNGPPFDFKIIPEGTKGTWRVEKLNGTTA
ILRAQDNVWPGSYEVTVEVKDQQGLSCPDKQVVKIDVCTCGGDEKNCGRTEKSGATFGSA
GIGLLILGLLMLLLVPLLLLFCSCGGLGGRGGYFLDMPFATKEHLISYHTEGQGEDKAVP
PLEAYLGGFVPGMGTLAAGSRGSQTVTGEGGLVNGQRTIKKTSGFGVSAESDGRALGDMS
YRQNSSIRNSKSEVRESYYDGIALPDAYLKEYYMQKSMYVTEEDQIQKDGLLIYDFEGRE
SPVGSVGCCSFIEGDDDLEFLNDLGPKFKTLAEICTSKEMKSELVVPPAMPTVQDVAVTR
TEIKRENTVTTDAVRPQPSPVPQPQIQKNIVTEQYSSTTLPAMHLRENVVVPSPAYVIQQ
PVYYTTTPAVQPTRYIVEPQVHNTVLFSERPAAPNVQGVLLLNEGSGSEKVLVQENRVVS
GSAVQGGALGVLHGTLNRSEIPGSQNVVLVERKAGSGQFVQEGVAGLNQGAVHRVGLPGS
QNVVFVERKAGSGQLLQEGIAGLYQGTVCSVDLSGKQNMMFREKKSII
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atggctgggacctctctcgcaggcgttggactgcaactgcttgtgatgctgctggttttc
caaaaacaactggaagcaaacgaaaacgtgcaactaaagaggcaaaaaagagcatggatt
attccaccattaagaataccagagaacgaggactacacaaagagggaatatatcggcaaa
attcgctccgactttgagagtaaacagacaattttctatgagataaagggaaaaggagct
gatgaagagcctatgaacatatttgttgtagacagagttcgtggcacaattagggtcaat
gacatcctggatagggaagaaattgctgtttacaatctcacgggaattgcatttgaccag
tcatacaaagcagtggaggaaaacattaatctcacgattgttgtggtagacaaaaatgat
tgtcctccagtgtttaaaatcaaccaggttggagaaatcaaagaactaagtgcaaaaggc
acccctgtcatgcaagtaattgctacagatgatgacgaccccgctacagaccatgctaaa
attaaatacagcatcgtgagccagtccccaccagagccacagatgttttatatagacgaa
gacacaggcatggtttacgttcaaaaagctacccttgacagggaaatgatcgactcctat
actttggtggtacaaggcagggatatggacggagcaatcacaggcaacactggagagggg
gacattcaaattaaaatcttagatgtcaatgataatgttcctacgctggagaaagaagaa
ttttctgccattgtggaagaaaacacagctaatattgaagtcatgagactgaaggccttg
gataaagatctagaatttacagacaactgggagacagagtttgaaattgtgtcaggaaat
gaagcaggctacttcactattgtgaagggctcccaggctaatgaagcaatcgtaatgctg
aacaaggcacttgattatgaagaaatgcaaaatgttgacattgctgtggctttaaggaac
aaggcggcttattacagtgaagctggaatggtatttggttcagggttagggaaatcctat
cctatcaaaattcaagttaaaaaccagcctgaggggcccaggtttagtcctaaggtaaag
gctatttccatctctgaggacaagaaaaagctcaacatcagcagggtgattgcaaaatat
ccagccatcaatggggacactgggaagccagctgagagagtcagatatgcaaaggcattt
gatcctgacaactggctgtcaattgatgaaaagacggcagagatcaaactgaacaagctg
ccagaccgggaatccaaacaattgattaatggcacatactacgcaaaaatattggtcatg
actgaagatttccctgcaaaaaccaccaccggtacgattgctatccaggtggaggaccac
aatgaccactgtccagttctgaccagtacctcccaggttctgtgtaacaagagcagagct
gcgtttatcacagctgaggatggagatatcgatcccaatgggcctccctttgatttcaaa
atcattcctgaaggtaccaagggcacatggagagttgaaaaactgaatggcaccactgca
atcctgcgagcccaggacaacgtgtggcctggctcatatgaagtcactgtggaggtgaaa
gaccaacaaggactatcctgtcctgataagcaggttgtcaagatagatgtctgcacctgt
ggaggtgatgaaaaaaactgtggacgcactgagaaaagtggtgctacatttggatctgca
ggcattggtctgctcatccttggattattgatgctgttactggtgcctctcctactgctg
ttctgctcgtgtggagggcttggaggcagaggggggtattttcttgacatgccttttgct
accaaagagcatttgatttcatatcacacagaaggacaaggcgaagacaaggcggtcccg
cctctggaagcttacttaggagggttcgtgcctggcatggggacgcttgctgcaggttcg
agagggtcgcagacggtgactggagaaggcggcctcgtcaatggacagaggacaattaaa
aagacgtccgggttcggcgtcagtgcagagtctgatggccgagctctgggagacatgagt
taccggcagaactcgagtattcgcaactccaagtctgaagtccgggaaagttactatgat
ggaattgcactccctgatgcttatttgaaagagtactacatgcagaagtcaatgtatgtt
acagaggaagaccagattcagaaagatggcttactgatttatgactttgaaggacgagaa
tcccctgtgggttcagtgggatgctgcagtttcattgaaggagatgatgatttggagttc
ctgaatgacctgggacccaagtttaagacccttgctgagatctgcacaagtaaagaaatg
aaatcggaacttgtggtccctcctgccatgcctactgtccaggatgtggctgtaactcgc
acagagatcaagagagaaaacactgtgacaactgatgctgtgagacctcagcccagccca
gttcctcagccccagatccagaaaaacattgtcaccgagcagtattcttccaccactctc
ccagccatgcacctcagagaaaatgtcgttgttcccagtcctgcatatgtcatccaacag
cctgtctattacactaccaccccagcggttcaacccactcggtacattgtggagccgcag
gtccacaacaccgtgcttttctcagaaaggccagctgctcctaatgtgcagggtgtgctg
ctgctgaatgaaggctcaggctctgagaaggtcctggttcaggagaacagagttgtgtct
ggctctgctgtgcagggtggagcactgggtgtcctccatggcaccttgaacaggagtgaa
atcccaggctctcagaatgtggtgttagtggagaggaaggctggatcagggcagtttgtg
caggagggggttgctgggcttaatcaaggggctgtgcacagggttggactgccagggtca
cagaatgtggtgtttgtggagaggaaggcaggatcaggccaactcttgcaggaagggatt
gctgggctttatcaaggaactgtatgtagtgtagacctatctggaaaacagaatatgatg
tttagagaaaaaaagagtatcatctag
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