KEGG   Lepisosteus oculatus (spotted gar): 102688384
Entry
102688384         CDS       T07349                                 
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1
  KO
K05635  laminin, gamma 1
Organism
loc  Lepisosteus oculatus (spotted gar)
Pathway
loc04510  Focal adhesion
loc04512  ECM-receptor interaction
loc04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:loc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102688384 (lamc1)
   04518 Integrin signaling
    102688384 (lamc1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102688384 (lamc1)
SSDB
Motif
Pfam: Laminin_N EGF_laminin EGF_LMN_ATRN Laminin_B Death
Other DBs
NCBI-GeneID: 102688384
NCBI-ProteinID: XP_006634695
Ensembl: ENSLOCG00000002091
UniProt: W5M265
LinkDB
Position
LG10:complement(1180606..1256374)
AA seq 1594 aa
MHWFTKVLTILTCLATCSNGAMDECTDDLNRPQRCMPEFVNAAFNVTVVATNTCGSPPEE
YCVQTGVTGVTKSCHICDARDPRVYHGAVYLTDYNNQADTTWWQSQTMLAGIQYPNTINL
TLHLGKSFDITYVRLKFHTSRPESFAIYKRTSEDGPWVPYQYYSSSCEKTYQKQNRGFIR
TGEDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATDIRVTLNR
LNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECIKNVNGRLVCNCKHNTEGDD
CSVCKGFYNDRPWRRATAENPNECLPCNCNGKSSECYFDPELYRATGHGGHCRGCADNTD
GPNCERCRDNYYRQRPSDRCLPCSCNAVGSLSTQCDNSGRCSCKPGVMGDKCDRCQPGYH
TLTEAGCRPCSCHSAGSTQECDIQTGRCQCKENVEGFSCDRCKLGYFNLDPLNPRGCTAC
FCFQHSSVCDSADGYSLHTITSTFSRDDEGWTGQQREGSSVKVQWLPSQQEISLISEDYF
PIYFVAPEQFLGNQFLSYGQNISLSFRVDRRDTRLSAEDIVLEGAGLRVAVPLIAQGNAY
PSENKQTYVFRLHDATDYPWRPSLSHSEFQKLLYNLTSIKIRGTYSERSAGYLDDVTLVT
ARRGPGTPALWVERCTCPQGYQGQFCEACAPGYRRSRPSLGPFSSCEPCSCNGHSETCDP
ETGVCDCRDNTAGPNCERCEDGYYGDSSSGTTSDCKPCPCPAGSTCAVVPVTKEVVCTNC
PSGTTGKRCELCDDGYFGDPLGQNGAVRSCNPCQCNDNIDPNAVGNCDRETGECLKCIYN
TDGFFCDRCKEGFFGNPLAANPADKCKPCSCSPYGTVDRQTTCSPVTGQCQCLPHVINRD
CSACEPGYYNLLSGQGCKRCDCNPVGSTNGQCDINTGQCECHPGVTGRQCERCEVNFFGF
GSDGCKPCDCDPYGSRTAQCMEDGRCECREGFVGMHCEMCEENYFRNSSRPGCQECPSCY
SLVKDKVNQQRRKLQELETLIENLGSSQEAVSDKAFEDRLKEAEKAIMDLLQEAQASKDV
DQGLLDRLGDINNTLSTQWNRLQNIRKTVDNTGELADKSRTRVRDTEKLIETARQELEKA
KDAINKVDIKPPTSTGDPNNMTLLAEEARKLAEKHKMDADQIEKIAKEANDTSTEAYNLL
RKTLDSENKINRDIDELNRKYNEAKDLAKNLEKQANKVHAEAEEAGNKALQIYANLTSLP
PVDTKTLEDEANKIKKEASDLDKLIDKTEKEYNDLRDDLKGKEVEVRKLLEKGKTEQQTA
DQLLARADAAKALAEEAAKKGRGTYQEAQDILNNLKDFDRRVNDNKTAAEDAMKKIPTIN
ATILAANEKTKQAEGALGNAAADAREAKNKAEAAQNIATEVQKNAAKTRADAEKTFEETM
KVDNEVNDMMTQLADAEAELAKKKAEADQDMMMANMASNAAQEAEDNARKAKNAVKMVLT
TINDLLGQLGNITNVDLSKLTDIDNSLKKAKNDMKDSDLDRKLRELNEAAKSQEDMISDY
DRQIQEIKADIANLNDIKNTLPAGCFNTPSIERP
NT seq 4785 nt   +upstreamnt  +downstreamnt
atgcattggtttactaaagttttaactatattgacttgcttggctacgtgcagcaacggt
gcaatggatgaatgtactgacgacttgaaccgtccccagcgctgtatgccggagtttgtt
aatgcagctttcaatgttactgttgtggccaccaacacttgcggttctccacccgaagaa
tactgcgtgcaaaccggggtgacgggagtcaccaagtcctgccatatctgcgatgccagg
gaccccagggtatatcacggcgctgtctacctcaccgactacaacaaccaggcggacact
acctggtggcaaagccagacaatgttagctggcatccagtatcccaacacaattaaccta
acccttcatcttggcaaatcttttgacatcacttatgtgagactgaagttccataccagc
cggccagagagctttgccatatacaagcgtaccagtgaggacgggccctgggtaccttac
cagtattacagcagctcctgcgagaagacttaccagaagcagaatcgtgggttcatcagg
actggggaggatgagcagcaggcgctgtgcacggacgagttcagcgacatatcccccctg
actgggggcaacgtggccttctccaccctcgagggccggcccagcgcctacaacttcgac
aacagccctgtcctgcaggaatgggtgacagctactgacatccgggtgaccttgaacagg
ctcaacacctttggagatgaagttttcaatgatcccaaagtcctcaaatcatactactat
gccatctctgactttgctgttggtggcaggtgtaaatgcaacgggcacgcaagcgagtgc
ataaagaacgtcaatggaagattagtgtgtaactgcaagcacaacaccgagggagacgac
tgcagtgtctgcaaaggcttctacaacgaccggccctggaggagagccacagctgaaaac
cccaacgagtgcttgccttgcaactgtaatggcaagtcttcagagtgttacttcgatccc
gagctgtatcgtgccacggggcacggcgggcattgccggggctgtgccgataacaccgac
gggcccaactgcgagcgttgccgtgacaactactacagacagaggcccagtgaccgctgc
ctgccctgcagctgcaatgcggttgggtctttgagcactcagtgcgataacagcggccgc
tgcagctgcaagccaggtgtgatgggagacaagtgcgaccgctgtcagccaggctaccac
acgctcacagaggcgggctgcaggccgtgctcgtgtcactcagcagggagcacacaggaa
tgtgacattcagacgggtcgctgccagtgcaaagaaaatgtggaggggttcagttgtgac
aggtgcaagctgggatattttaaccttgaccctctgaaccctcggggatgtaccgcctgc
ttctgtttccagcactcctctgtgtgcgacagcgctgatggctacagcctgcacaccatc
acttccaccttcagcagggatgatgaaggctggaccggacagcagcgtgaaggctcaagt
gtcaaagttcagtggttgcctagccaacaggagatctccctgatttcagaagattacttc
cctatctactttgttgctccagagcagttccttggcaaccagtttctgagctatgggcag
aacatctccctgagtttccgggtggatcgccgtgacacccgcctgtcggctgaggatata
gtgctggagggggcaggcttgcgggtagcggtgccactgatcgcacagggcaatgcctac
cccagtgagaacaagcagacctacgtgttcaggctgcatgatgcaacagattatccctgg
aggccgagcctcagtcactccgaatttcagaagttactttacaatctgacttccattaag
atccggggtacttacagtgagagaagtgctggctatctggatgacgttaccttggtgacg
gcccgccgtgggccgggcactcctgccctgtgggtggagaggtgcacctgcccacagggc
taccaggggcagttctgtgaggcgtgtgcccccggatacaggagatcaaggccgagtctg
gggcccttcagcagctgcgagccctgcagctgtaatggccacagtgagacctgcgacccc
gagactggggtttgtgactgcagagataacacagcaggcccgaactgtgagcggtgtgag
gatggttactatggagactcgtccagtggcaccacgtcggactgcaagccttgcccctgt
ccagcgggttccacctgtgctgttgtgccagtgaccaaagaggtggtctgtaccaactgc
ccttctggcactacgggcaagcgctgtgagctgtgcgacgacggctacttcggggatccc
ctggggcagaacggggctgttcggtcgtgcaatccgtgtcagtgcaatgacaacattgac
cccaacgctgtgggcaactgtgaccgggagactggagagtgcctgaaatgcatctataac
accgatgggttcttctgtgaccgatgcaaagagggcttctttggcaaccccctggctgcc
aaccccgcggataagtgcaagccctgctcctgctctccctacggtacagtggacagacag
accacctgctcgccggtcacagggcagtgccagtgtttgccgcatgtcatcaaccgggac
tgcagtgcctgtgagcctggatactacaatctgctgagcggccagggctgcaaacggtgt
gactgcaacccagtgggctccacaaatggtcagtgtgatatcaacactggtcagtgcgag
tgtcatcccggggtcactggtcggcagtgtgagcgctgcgaagtcaacttcttcggcttt
ggatcagatggttgcaaaccttgcgactgtgacccttatggctcccggactgcacagtgt
atggaggatggcaggtgtgagtgcagagaaggctttgtgggaatgcactgtgaaatgtgt
gaggagaactacttcagaaacagctcaaggcctggctgtcaggagtgtccatcctgctac
tcattagtgaaagataaggtgaaccagcagagacgaaaactgcaggagctagagaccttg
atcgagaacctaggatccagtcaggaagctgtgagtgacaaggcctttgaagaccgactg
aaagaggcagagaaagccatcatggacctcctgcaagaagcacaagccagcaaagatgtt
gatcaaggactgcttgaccgcttgggtgacatcaataacacattgagcactcaatggaat
cgacttcagaatatcagaaaaactgtggacaatactggagagctggcagacaagtcccgt
actcgagtccgggatacagaaaagctgatagagactgccaggcaggagctagagaaagct
aaagatgctatcaataaagtggacatcaaacctcccacttcaactggagatccaaataat
atgacccttttagctgaggaagctcggaagctggcagagaagcacaaaatggacgcagat
caaattgagaagattgccaaggaagctaatgacacctccacagaagcttataacctgctt
cgtaagacactggacagcgagaacaaaattaacagggatattgatgaactcaatagaaag
tataatgaagccaaggacctagctaaaaaccttgagaaacaagccaacaaagtccatgct
gaagcagaagaagccgggaacaaggctttgcagatttatgcgaacttgactagcctccca
cccgtggacaccaaaactcttgaagatgaagcaaacaagatcaagaaagaggcttcagac
ctcgacaaactcatcgataagacggagaaagagtataacgacctgagggatgacctcaag
ggcaaggaagtggaagtcaggaagcttctagaaaaaggaaaaacggagcagcagactgca
gaccagctgctggcccgagctgacgctgctaaggcactggccgaggaagctgccaagaaa
gggagaggcacataccaggaagcccaagacattctcaacaacctgaaagactttgacagg
cgagtgaatgacaataagacggcggctgaagacgcgatgaagaagatcccgaccatcaac
gccaccatccttgcggccaacgagaagacaaagcaggccgagggggctctagggaatgct
gcggcagatgccagggaggccaaaaacaaggcggaggcggcacagaatattgccactgaa
gtccagaagaatgctgccaagaccagagcagatgctgagaaaacgtttgaggagacaatg
aaggtggacaatgaggtcaatgacatgatgacccaactggctgatgcagaggcggaactg
gctaagaagaaggcagaggctgaccaggacatgatgatggccaacatggcttcaaatgcg
gcccaggaagcggaagacaatgcccgaaaagcaaagaatgcagtcaagatggttctgacc
accattaatgaccttcttggccagctaggtaacattaccaacgtggacttgagcaagttg
acagacattgataactcacttaaaaaggccaagaatgacatgaaagacagcgatcttgac
cgaaagctcagggagctgaatgaggcggccaagagccaagaggacatgatcagcgattac
gaccggcagatccaagagatcaaggcggacattgcaaaccttaacgacatcaagaacaca
ttaccggctggctgcttcaacactccctctatagagaggccctaa

DBGET integrated database retrieval system