Lepisosteus oculatus (spotted gar): 102688384
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Entry
102688384 CDS
T07349
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04510
Focal adhesion
loc04512
ECM-receptor interaction
loc04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102688384 (lamc1)
04518 Integrin signaling
102688384 (lamc1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102688384 (lamc1)
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
Death
Motif
Other DBs
NCBI-GeneID:
102688384
NCBI-ProteinID:
XP_006634695
Ensembl:
ENSLOCG00000002091
UniProt:
W5M265
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All DBs
Position
LG10:complement(1180606..1256374)
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AA seq
1594 aa
AA seq
DB search
MHWFTKVLTILTCLATCSNGAMDECTDDLNRPQRCMPEFVNAAFNVTVVATNTCGSPPEE
YCVQTGVTGVTKSCHICDARDPRVYHGAVYLTDYNNQADTTWWQSQTMLAGIQYPNTINL
TLHLGKSFDITYVRLKFHTSRPESFAIYKRTSEDGPWVPYQYYSSSCEKTYQKQNRGFIR
TGEDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATDIRVTLNR
LNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECIKNVNGRLVCNCKHNTEGDD
CSVCKGFYNDRPWRRATAENPNECLPCNCNGKSSECYFDPELYRATGHGGHCRGCADNTD
GPNCERCRDNYYRQRPSDRCLPCSCNAVGSLSTQCDNSGRCSCKPGVMGDKCDRCQPGYH
TLTEAGCRPCSCHSAGSTQECDIQTGRCQCKENVEGFSCDRCKLGYFNLDPLNPRGCTAC
FCFQHSSVCDSADGYSLHTITSTFSRDDEGWTGQQREGSSVKVQWLPSQQEISLISEDYF
PIYFVAPEQFLGNQFLSYGQNISLSFRVDRRDTRLSAEDIVLEGAGLRVAVPLIAQGNAY
PSENKQTYVFRLHDATDYPWRPSLSHSEFQKLLYNLTSIKIRGTYSERSAGYLDDVTLVT
ARRGPGTPALWVERCTCPQGYQGQFCEACAPGYRRSRPSLGPFSSCEPCSCNGHSETCDP
ETGVCDCRDNTAGPNCERCEDGYYGDSSSGTTSDCKPCPCPAGSTCAVVPVTKEVVCTNC
PSGTTGKRCELCDDGYFGDPLGQNGAVRSCNPCQCNDNIDPNAVGNCDRETGECLKCIYN
TDGFFCDRCKEGFFGNPLAANPADKCKPCSCSPYGTVDRQTTCSPVTGQCQCLPHVINRD
CSACEPGYYNLLSGQGCKRCDCNPVGSTNGQCDINTGQCECHPGVTGRQCERCEVNFFGF
GSDGCKPCDCDPYGSRTAQCMEDGRCECREGFVGMHCEMCEENYFRNSSRPGCQECPSCY
SLVKDKVNQQRRKLQELETLIENLGSSQEAVSDKAFEDRLKEAEKAIMDLLQEAQASKDV
DQGLLDRLGDINNTLSTQWNRLQNIRKTVDNTGELADKSRTRVRDTEKLIETARQELEKA
KDAINKVDIKPPTSTGDPNNMTLLAEEARKLAEKHKMDADQIEKIAKEANDTSTEAYNLL
RKTLDSENKINRDIDELNRKYNEAKDLAKNLEKQANKVHAEAEEAGNKALQIYANLTSLP
PVDTKTLEDEANKIKKEASDLDKLIDKTEKEYNDLRDDLKGKEVEVRKLLEKGKTEQQTA
DQLLARADAAKALAEEAAKKGRGTYQEAQDILNNLKDFDRRVNDNKTAAEDAMKKIPTIN
ATILAANEKTKQAEGALGNAAADAREAKNKAEAAQNIATEVQKNAAKTRADAEKTFEETM
KVDNEVNDMMTQLADAEAELAKKKAEADQDMMMANMASNAAQEAEDNARKAKNAVKMVLT
TINDLLGQLGNITNVDLSKLTDIDNSLKKAKNDMKDSDLDRKLRELNEAAKSQEDMISDY
DRQIQEIKADIANLNDIKNTLPAGCFNTPSIERP
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgcattggtttactaaagttttaactatattgacttgcttggctacgtgcagcaacggt
gcaatggatgaatgtactgacgacttgaaccgtccccagcgctgtatgccggagtttgtt
aatgcagctttcaatgttactgttgtggccaccaacacttgcggttctccacccgaagaa
tactgcgtgcaaaccggggtgacgggagtcaccaagtcctgccatatctgcgatgccagg
gaccccagggtatatcacggcgctgtctacctcaccgactacaacaaccaggcggacact
acctggtggcaaagccagacaatgttagctggcatccagtatcccaacacaattaaccta
acccttcatcttggcaaatcttttgacatcacttatgtgagactgaagttccataccagc
cggccagagagctttgccatatacaagcgtaccagtgaggacgggccctgggtaccttac
cagtattacagcagctcctgcgagaagacttaccagaagcagaatcgtgggttcatcagg
actggggaggatgagcagcaggcgctgtgcacggacgagttcagcgacatatcccccctg
actgggggcaacgtggccttctccaccctcgagggccggcccagcgcctacaacttcgac
aacagccctgtcctgcaggaatgggtgacagctactgacatccgggtgaccttgaacagg
ctcaacacctttggagatgaagttttcaatgatcccaaagtcctcaaatcatactactat
gccatctctgactttgctgttggtggcaggtgtaaatgcaacgggcacgcaagcgagtgc
ataaagaacgtcaatggaagattagtgtgtaactgcaagcacaacaccgagggagacgac
tgcagtgtctgcaaaggcttctacaacgaccggccctggaggagagccacagctgaaaac
cccaacgagtgcttgccttgcaactgtaatggcaagtcttcagagtgttacttcgatccc
gagctgtatcgtgccacggggcacggcgggcattgccggggctgtgccgataacaccgac
gggcccaactgcgagcgttgccgtgacaactactacagacagaggcccagtgaccgctgc
ctgccctgcagctgcaatgcggttgggtctttgagcactcagtgcgataacagcggccgc
tgcagctgcaagccaggtgtgatgggagacaagtgcgaccgctgtcagccaggctaccac
acgctcacagaggcgggctgcaggccgtgctcgtgtcactcagcagggagcacacaggaa
tgtgacattcagacgggtcgctgccagtgcaaagaaaatgtggaggggttcagttgtgac
aggtgcaagctgggatattttaaccttgaccctctgaaccctcggggatgtaccgcctgc
ttctgtttccagcactcctctgtgtgcgacagcgctgatggctacagcctgcacaccatc
acttccaccttcagcagggatgatgaaggctggaccggacagcagcgtgaaggctcaagt
gtcaaagttcagtggttgcctagccaacaggagatctccctgatttcagaagattacttc
cctatctactttgttgctccagagcagttccttggcaaccagtttctgagctatgggcag
aacatctccctgagtttccgggtggatcgccgtgacacccgcctgtcggctgaggatata
gtgctggagggggcaggcttgcgggtagcggtgccactgatcgcacagggcaatgcctac
cccagtgagaacaagcagacctacgtgttcaggctgcatgatgcaacagattatccctgg
aggccgagcctcagtcactccgaatttcagaagttactttacaatctgacttccattaag
atccggggtacttacagtgagagaagtgctggctatctggatgacgttaccttggtgacg
gcccgccgtgggccgggcactcctgccctgtgggtggagaggtgcacctgcccacagggc
taccaggggcagttctgtgaggcgtgtgcccccggatacaggagatcaaggccgagtctg
gggcccttcagcagctgcgagccctgcagctgtaatggccacagtgagacctgcgacccc
gagactggggtttgtgactgcagagataacacagcaggcccgaactgtgagcggtgtgag
gatggttactatggagactcgtccagtggcaccacgtcggactgcaagccttgcccctgt
ccagcgggttccacctgtgctgttgtgccagtgaccaaagaggtggtctgtaccaactgc
ccttctggcactacgggcaagcgctgtgagctgtgcgacgacggctacttcggggatccc
ctggggcagaacggggctgttcggtcgtgcaatccgtgtcagtgcaatgacaacattgac
cccaacgctgtgggcaactgtgaccgggagactggagagtgcctgaaatgcatctataac
accgatgggttcttctgtgaccgatgcaaagagggcttctttggcaaccccctggctgcc
aaccccgcggataagtgcaagccctgctcctgctctccctacggtacagtggacagacag
accacctgctcgccggtcacagggcagtgccagtgtttgccgcatgtcatcaaccgggac
tgcagtgcctgtgagcctggatactacaatctgctgagcggccagggctgcaaacggtgt
gactgcaacccagtgggctccacaaatggtcagtgtgatatcaacactggtcagtgcgag
tgtcatcccggggtcactggtcggcagtgtgagcgctgcgaagtcaacttcttcggcttt
ggatcagatggttgcaaaccttgcgactgtgacccttatggctcccggactgcacagtgt
atggaggatggcaggtgtgagtgcagagaaggctttgtgggaatgcactgtgaaatgtgt
gaggagaactacttcagaaacagctcaaggcctggctgtcaggagtgtccatcctgctac
tcattagtgaaagataaggtgaaccagcagagacgaaaactgcaggagctagagaccttg
atcgagaacctaggatccagtcaggaagctgtgagtgacaaggcctttgaagaccgactg
aaagaggcagagaaagccatcatggacctcctgcaagaagcacaagccagcaaagatgtt
gatcaaggactgcttgaccgcttgggtgacatcaataacacattgagcactcaatggaat
cgacttcagaatatcagaaaaactgtggacaatactggagagctggcagacaagtcccgt
actcgagtccgggatacagaaaagctgatagagactgccaggcaggagctagagaaagct
aaagatgctatcaataaagtggacatcaaacctcccacttcaactggagatccaaataat
atgacccttttagctgaggaagctcggaagctggcagagaagcacaaaatggacgcagat
caaattgagaagattgccaaggaagctaatgacacctccacagaagcttataacctgctt
cgtaagacactggacagcgagaacaaaattaacagggatattgatgaactcaatagaaag
tataatgaagccaaggacctagctaaaaaccttgagaaacaagccaacaaagtccatgct
gaagcagaagaagccgggaacaaggctttgcagatttatgcgaacttgactagcctccca
cccgtggacaccaaaactcttgaagatgaagcaaacaagatcaagaaagaggcttcagac
ctcgacaaactcatcgataagacggagaaagagtataacgacctgagggatgacctcaag
ggcaaggaagtggaagtcaggaagcttctagaaaaaggaaaaacggagcagcagactgca
gaccagctgctggcccgagctgacgctgctaaggcactggccgaggaagctgccaagaaa
gggagaggcacataccaggaagcccaagacattctcaacaacctgaaagactttgacagg
cgagtgaatgacaataagacggcggctgaagacgcgatgaagaagatcccgaccatcaac
gccaccatccttgcggccaacgagaagacaaagcaggccgagggggctctagggaatgct
gcggcagatgccagggaggccaaaaacaaggcggaggcggcacagaatattgccactgaa
gtccagaagaatgctgccaagaccagagcagatgctgagaaaacgtttgaggagacaatg
aaggtggacaatgaggtcaatgacatgatgacccaactggctgatgcagaggcggaactg
gctaagaagaaggcagaggctgaccaggacatgatgatggccaacatggcttcaaatgcg
gcccaggaagcggaagacaatgcccgaaaagcaaagaatgcagtcaagatggttctgacc
accattaatgaccttcttggccagctaggtaacattaccaacgtggacttgagcaagttg
acagacattgataactcacttaaaaaggccaagaatgacatgaaagacagcgatcttgac
cgaaagctcagggagctgaatgaggcggccaagagccaagaggacatgatcagcgattac
gaccggcagatccaagagatcaaggcggacattgcaaaccttaacgacatcaagaacaca
ttaccggctggctgcttcaacactccctctatagagaggccctaa
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integrated database retrieval system