Lepisosteus oculatus (spotted gar): 102688460
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Entry
102688460 CDS
T07349
Symbol
tmc6
Name
(RefSeq) transmembrane channel-like protein 6
KO
K21988
transmembrane channel-like protein
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
loc02000
]
102688460 (tmc6)
03037 Cilium and associated proteins [BR:
loc03037
]
102688460 (tmc6)
Transporters [BR:
loc02000
]
Other transporters
Pores ion channels [TC:
1
]
102688460 (tmc6)
Cilium and associated proteins [BR:
loc03037
]
Other cilia and associated proteins
Stereociliary proteins
102688460 (tmc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
102688460
NCBI-ProteinID:
XP_006635470
Ensembl:
ENSLOCG00000012634
UniProt:
W5N4K2
LinkDB
All DBs
Position
LG10:complement(35976131..36005540)
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AA seq
829 aa
AA seq
DB search
MARKVSFSDLEEMEAAIESPLSPMDENLVHDSFSQLIEEQSHSMDEEGQEVIEMDDILGE
GRDNPAYLSSPARHGRDEPGERELPVTGGARDGDPLMSEHFSAATLRVLSAMPSRTIGRN
RGAIISQYYNRTLQLRRRHQSRPSIRDFSHSSRPSIRGYGVAVGEDEDALKTERLISNLK
SLPASDRARTLRTMPLSLSEKSELRKLACNYKGGHSVSRSEIPCCSHIKSYFIIGLRQGW
SSWLAFLRRLQLWQVALKQLGGRFGTGVLSYFVFLRTLLLFNVFLFLVNTFFLVIPQVVH
RPPDVRNRSFLGLELLTGAGYFTDTVMFYGYYTNSTLNSSYSPAAGGSDEKRVPYNMPLA
YFFTIGISFFITCIILVFSMSKSFGESYRIDTPHGDLAMKVFCSWDFKVIKKSSVKLQCE
NISTQLKELLSELALRRNKTSLLQRLAWVMVHMLAWAMCLGVTLGCVLATYYFSDYMHQD
LRTRTRNVDQNSRPEGLLLQEASLLALPVVVSSINLLVPGFFNTVAWMEEFSSPSMHTYV
ATFRNLVLKVSLLGVLCYHWLRNIAKNPQSVNLECWETFVGQELYRFLLMDFIFTLLDTL
FGEFLWKLFSQRALKRKRKPEFDIARNVLELIYGQTLAWLGVLFSPLLPAMQIIKLLLLF
YIKKTSLMMNCQSPRKPWRASQMTTIFISLLCFPSFLGAAVTVTYTFWAIKPSESCGPFR
GLNSMFQSGKKWAEKLKSTNPDLAWLAWVHTYLVENPLFLFIAGGIFLVVIYFHTQVVDG
QRKIISLLQEQIENEGEDKKFLITKLQVIHEQKRPVSGRRLNIRSSQDS
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggaaggtcagcttcagcgacttggaggaaatggaagctgcaatagagagtccc
ttaagtcccatggacgaaaaccttgtccacgactccttcagccagctgatcgaggagcag
agccacagcatggacgaggagggtcaggaggtcatcgagatggatgacattctgggggag
gggcgagataatccggcctacctgtcctctccggcccggcacggcagggatgagccgggg
gagagggagctccccgtcaccgggggcgcgcgagatggggaccccctgatgagcgagcac
ttctccgccgccactctcagggtgctgtcggccatgcccagccgcaccatcgggcgcaac
cgcggtgccatcatctcgcagtactacaaccgcaccctgcagctgcgccgccgccaccag
agccggccctccatccgggacttctcccactcctcccggcccagcatccgcggatacgga
gtggcggtgggcgaggacgaggacgctctaaagacggagcgtctgatcagcaacctgaag
agcctgccagccagtgatcgggcgcgcacgctgcggaccatgcccctcagcctgagcgag
aagtctgagctccggaaactggcctgtaactataaaggagggcactctgtttcccgcagt
gagattccgtgctgcagccacatcaagagttatttcatcattggcctgcggcaaggctgg
tccagctggctggccttcctgcgccgcctgcagctgtggcaggtggcgctgaagcagctg
ggcggccgcttcgggacgggcgtgctctcctacttcgtcttcctcaggaccctgctgctc
ttcaacgtcttcctcttcctcgtcaacaccttcttcctagtcatcccgcaggtggtccac
cggcccccggatgtcaggaacagatccttcctgggcctggagctgctcacgggggcgggc
tactttacagatactgtgatgttttatggctactacaccaactctaccttgaacagcagc
tatagccctgcagccggaggctctgatgagaaaagggtgccctacaacatgcctctggcc
tacttcttcactattggcatctcgttctttatcacctgcatcatccttgtcttcagcatg
tcgaagtctttcggtgaaagctaccgcatagacacccctcacggtgacttggcgatgaag
gtgttctgttcctgggattttaaagtcattaagaagagctctgtaaagctgcagtgtgag
aacatcagcactcagctgaaggagctgctgtcagagctggccctcaggaggaacaagaca
agcctgcttcagaggctggcgtgggtgatggtgcacatgctggcctgggcaatgtgcctg
ggagtcacactgggctgtgtcctggccacgtactacttctctgattacatgcaccaggac
ctgaggacgaggacacgaaatgttgaccagaacagcaggccagagggtctcctgctgcaa
gaagccagtctgctagctctgcctgtggtggtttccagtattaacctgctggtaccgggc
ttcttcaacacagtagcctggatggaggagttcagctcacccagtatgcacacctatgtc
gccaccttcaggaacctggtgctgaaagtgagcttgctgggagtgctgtgttaccactgg
ctgagaaacattgccaagaacccacagagtgtgaacttggagtgctgggagacctttgtt
ggacaggagctgtatcgctttttactgatggatttcatcttcaccttactggataccctc
tttggggaattcctctggaagctgttttctcagagagcgctgaagaggaagaggaaaccc
gagttcgacattgcccgtaatgtgctggaacttatctacgggcagacactagcctggttg
ggtgtgctgttttcccccttacttcctgctatgcagattatcaaactactgcttttattt
tatattaaaaagaccagtctgatgatgaactgccaatctccgaggaagccgtggagggcc
agtcagatgaccaccatcttcatcagcctgctgtgtttcccctctttcctaggggccgcg
gtcactgtcacgtacaccttctgggcgatcaagccctctgagagctgtgggcctttccgt
ggtctgaacagcatgtttcagtcggggaagaagtgggctgagaagctcaagagcaccaat
ccagacctggcctggctcgcctgggtgcacacgtacctggtggagaaccccctgttcctc
ttcattgcagggggcatcttcctagttgttatttatttccacacacaagtcgtggatggc
caaaggaaaataatcagtttgcttcaagaacagatagaaaatgagggagaggacaaaaag
ttccttattacaaaactgcaggtgattcacgagcagaagaggccagtatctgggaggagg
ttgaatattagaagcagtcaggactcctag
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