KEGG   Lepisosteus oculatus (spotted gar): 102688523
Entry
102688523         CDS       T07349                                 
Symbol
vps50
Name
(RefSeq) syndetin
  KO
K23288  syndetin
Organism
loc  Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:loc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:loc04131]
    102688523 (vps50)
Membrane trafficking [BR:loc04131]
 Protein recycling
  Others
   EARP complex
    102688523 (vps50)
SSDB
Motif
Pfam: Vps54_N Syndetin_C SAC9_GBDL_2nd
Other DBs
NCBI-GeneID: 102688523
NCBI-ProteinID: XP_015213639
Ensembl: ENSLOCG00000010759
LinkDB
Position
LG11:36839730..36965453
AA seq 862 aa
MQKIKSLMTRQGPRSPQENAGDLSPVENFRIPSKEELREMREQPIDPQAEQEIINSIEEV
YFSSDSFDIVQHELEKLPPVLNLQELEEYRDNLKRQQAAVSKKVADLILEKQPSYVKELE
RVTSLQTNLQLAAVICTNARRHLSFAKEGFTQASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVTHYTKVQQAYTLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITPDSYIPCLTDLCKALWEVMLSYHRTMEWHEEHDKEEAVPVADG
NNTASAEESVFDRSYVKKKLEHGLSRIWQDVQLKVKAYLLGTDMSNFKYDDFILVLDIIS
RLMQVGEEFCGSKSEVLQESIKRQSVNYFKNYHRTRLEELRMFLENEVWEVCPVKSNFNI
IQLHEFKFLGQSRSPSVSPSKQASTPCATELSLFEQYHNGGNPFEMQIDNKDDETEDVLA
SNGYESDELEKGVCQDYDSDSDVPEELKRDYVDEQTGDIPVKSMSRDTLKSRKKSDYSLN
KVNVPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCMSQLFDYYLYAVYTFFGRNDMY
ESSGLGLISSRLRTTLNRIQESLIDLEAATESAGSHGTSEERKEKVPSPHLSQLVVLTAS
ETLYGLAERVVATESLVFLAEQFEFLQSHLDTMMPAAKKPFLQQFYSQTISTASELRKPI
YWIVAAKAIDYEQMLLLMAGVKWDIKEIMSQHNVYVDVLLKEFEQFNKRLGEVSRLVRIP
LPVSNVLWEHCIRLANRTLVEG
NT seq 2589 nt   +upstreamnt  +downstreamnt
atgcaaaagataaaatcgctaatgacccggcagggtcccagaagtccccaggagaatgca
ggtgacctcagccctgtggagaacttcaggattcctagcaaggaggaactgcgggaaatg
agagagcagcccatcgacccacaggccgagcaagaaataattaatagtatagaggaagtg
tatttttccagtgattcatttgacattgtgcagcacgagttagagaaacttcctcctgtt
ctaaatcttcaagaattggaagaatacagggataacctgaagagacagcaagctgcagta
tcaaaaaaggtagctgatctcatcctggagaagcagccttcctatgtcaaggaacttgaa
cgagtcacttctttacagacaaaccttcagctggcagctgtcatctgtacaaatgcaaga
agacacttaagttttgccaaggaaggtttcacacaagctagccttggtcttctggccaac
cagcgaaggaggcagttactgactgggctgctgaagtcgctaaggacaataaaaacactg
caaagaacagatgtgaggttaagtgaaatgctcgaggaagaagattatcctggagcgatt
cagttgtgtctggaatgccagaaggctgctagcacattcaagcactacagttgtataagc
gaattaaattccaagctgcaagacactctggagcaaatagaggaacaactggatgttgcc
ttgtcgaaaacctgcaagcactttgatgtcactcattataccaaagttcagcaggcttat
acgctcctgggaaaaacacaaactgcaatggaccaactccatatgcatttcacccaggcc
attcacaacaccgtgttccaggtggtgctgggatatgtcgaactgtgtgcaggaaatgca
gacaccaagtttcagaagatgcagtacaaagatctctgcacgcacattactccagatagt
tacataccatgcctcactgatctgtgcaaagccttgtgggaagtgatgctgagttaccat
cgaactatggagtggcacgaggagcatgacaaagaagaggcagttcctgtggcagatggc
aacaacacggcgagtgcggaagagtccgtcttcgatcgcagctacgtgaagaagaaattg
gagcacgggctgtctcgtatctggcaggatgtccagctgaaagtcaaagcttacttactc
ggaacagatatgtccaacttcaagtacgacgacttcatccttgtgctagatattatcagc
agactgatgcaggtgggagaagaattttgtgggagcaagtctgaggttttgcaagagtcc
attaaaaggcaaagtgtgaactacttcaagaattaccacagaacccggcttgaggagctg
agaatgtttttggaaaatgaagtctgggaggtttgccctgttaagtcaaacttcaacatt
atacagcttcacgaattcaaatttctgggacagtcgagatctccttcagtgtcgcccagc
aaacaggccagcactccctgtgccacagaactgtccctgtttgaacagtaccacaatggg
ggaaacccatttgagatgcagatagacaacaaagacgatgaaactgaagatgtcctggct
tctaatgggtatgaatctgatgaactggagaagggtgtctgccaggattacgacagtgac
agtgatgtgcctgaagagctcaagagggactatgtggatgagcagacaggagacattcct
gtgaaaagtatgtctcgagataccctaaagagcaggaagaagtcagactacagccttaat
aaggtgaatgtacccatcttgacgaacactaccttgaatgtaatcaggcttgttgggaag
tacatgcagatgatgaacatcctgaagcccatagcctttgatgtaatccactgcatgtct
cagttatttgactattatttgtatgcagtctacacattttttggccgtaacgatatgtat
gagtcatccggacttggtctgatcagcagcagattacggactactctcaacagaatacag
gagagtcttattgacttggaggcagcaacagaaagtgctgggagccatggaacttctgaa
gagcgaaaggagaaggtgccaagccctcatctgagccagttagtggtattaacagccagc
gaaacactgtatggacttgcagaaagagtggttgccacagaatccctggtttttctggct
gaacagtttgagttcctccagtctcatcttgacacaatgatgcccgcagccaagaaacca
tttctccaacagttctattcccagaccatatccactgccagtgagctacgaaagcctatt
tactggattgtggctgccaaagccatcgattacgaacagatgttgctgctaatggccggt
gtaaaatgggacataaaagaaattatgtcacaacacaatgtatatgtggatgtgcttcta
aaggaatttgagcagtttaacaagagacttggagaggtttctaggcttgttcgcatacct
ttgccggtctccaacgtcttgtgggagcactgcattcgactggctaaccgaactcttgtg
gaggggtaa

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