Lepisosteus oculatus (spotted gar): 102688523
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Entry
102688523 CDS
T07349
Symbol
vps50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
loc04131
]
102688523 (vps50)
Membrane trafficking [BR:
loc04131
]
Protein recycling
Others
EARP complex
102688523 (vps50)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
SAC9_GBDL_2nd
Motif
Other DBs
NCBI-GeneID:
102688523
NCBI-ProteinID:
XP_015213639
Ensembl:
ENSLOCG00000010759
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Position
LG11:36839730..36965453
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AA seq
862 aa
AA seq
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MQKIKSLMTRQGPRSPQENAGDLSPVENFRIPSKEELREMREQPIDPQAEQEIINSIEEV
YFSSDSFDIVQHELEKLPPVLNLQELEEYRDNLKRQQAAVSKKVADLILEKQPSYVKELE
RVTSLQTNLQLAAVICTNARRHLSFAKEGFTQASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVTHYTKVQQAYTLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITPDSYIPCLTDLCKALWEVMLSYHRTMEWHEEHDKEEAVPVADG
NNTASAEESVFDRSYVKKKLEHGLSRIWQDVQLKVKAYLLGTDMSNFKYDDFILVLDIIS
RLMQVGEEFCGSKSEVLQESIKRQSVNYFKNYHRTRLEELRMFLENEVWEVCPVKSNFNI
IQLHEFKFLGQSRSPSVSPSKQASTPCATELSLFEQYHNGGNPFEMQIDNKDDETEDVLA
SNGYESDELEKGVCQDYDSDSDVPEELKRDYVDEQTGDIPVKSMSRDTLKSRKKSDYSLN
KVNVPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCMSQLFDYYLYAVYTFFGRNDMY
ESSGLGLISSRLRTTLNRIQESLIDLEAATESAGSHGTSEERKEKVPSPHLSQLVVLTAS
ETLYGLAERVVATESLVFLAEQFEFLQSHLDTMMPAAKKPFLQQFYSQTISTASELRKPI
YWIVAAKAIDYEQMLLLMAGVKWDIKEIMSQHNVYVDVLLKEFEQFNKRLGEVSRLVRIP
LPVSNVLWEHCIRLANRTLVEG
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagataaaatcgctaatgacccggcagggtcccagaagtccccaggagaatgca
ggtgacctcagccctgtggagaacttcaggattcctagcaaggaggaactgcgggaaatg
agagagcagcccatcgacccacaggccgagcaagaaataattaatagtatagaggaagtg
tatttttccagtgattcatttgacattgtgcagcacgagttagagaaacttcctcctgtt
ctaaatcttcaagaattggaagaatacagggataacctgaagagacagcaagctgcagta
tcaaaaaaggtagctgatctcatcctggagaagcagccttcctatgtcaaggaacttgaa
cgagtcacttctttacagacaaaccttcagctggcagctgtcatctgtacaaatgcaaga
agacacttaagttttgccaaggaaggtttcacacaagctagccttggtcttctggccaac
cagcgaaggaggcagttactgactgggctgctgaagtcgctaaggacaataaaaacactg
caaagaacagatgtgaggttaagtgaaatgctcgaggaagaagattatcctggagcgatt
cagttgtgtctggaatgccagaaggctgctagcacattcaagcactacagttgtataagc
gaattaaattccaagctgcaagacactctggagcaaatagaggaacaactggatgttgcc
ttgtcgaaaacctgcaagcactttgatgtcactcattataccaaagttcagcaggcttat
acgctcctgggaaaaacacaaactgcaatggaccaactccatatgcatttcacccaggcc
attcacaacaccgtgttccaggtggtgctgggatatgtcgaactgtgtgcaggaaatgca
gacaccaagtttcagaagatgcagtacaaagatctctgcacgcacattactccagatagt
tacataccatgcctcactgatctgtgcaaagccttgtgggaagtgatgctgagttaccat
cgaactatggagtggcacgaggagcatgacaaagaagaggcagttcctgtggcagatggc
aacaacacggcgagtgcggaagagtccgtcttcgatcgcagctacgtgaagaagaaattg
gagcacgggctgtctcgtatctggcaggatgtccagctgaaagtcaaagcttacttactc
ggaacagatatgtccaacttcaagtacgacgacttcatccttgtgctagatattatcagc
agactgatgcaggtgggagaagaattttgtgggagcaagtctgaggttttgcaagagtcc
attaaaaggcaaagtgtgaactacttcaagaattaccacagaacccggcttgaggagctg
agaatgtttttggaaaatgaagtctgggaggtttgccctgttaagtcaaacttcaacatt
atacagcttcacgaattcaaatttctgggacagtcgagatctccttcagtgtcgcccagc
aaacaggccagcactccctgtgccacagaactgtccctgtttgaacagtaccacaatggg
ggaaacccatttgagatgcagatagacaacaaagacgatgaaactgaagatgtcctggct
tctaatgggtatgaatctgatgaactggagaagggtgtctgccaggattacgacagtgac
agtgatgtgcctgaagagctcaagagggactatgtggatgagcagacaggagacattcct
gtgaaaagtatgtctcgagataccctaaagagcaggaagaagtcagactacagccttaat
aaggtgaatgtacccatcttgacgaacactaccttgaatgtaatcaggcttgttgggaag
tacatgcagatgatgaacatcctgaagcccatagcctttgatgtaatccactgcatgtct
cagttatttgactattatttgtatgcagtctacacattttttggccgtaacgatatgtat
gagtcatccggacttggtctgatcagcagcagattacggactactctcaacagaatacag
gagagtcttattgacttggaggcagcaacagaaagtgctgggagccatggaacttctgaa
gagcgaaaggagaaggtgccaagccctcatctgagccagttagtggtattaacagccagc
gaaacactgtatggacttgcagaaagagtggttgccacagaatccctggtttttctggct
gaacagtttgagttcctccagtctcatcttgacacaatgatgcccgcagccaagaaacca
tttctccaacagttctattcccagaccatatccactgccagtgagctacgaaagcctatt
tactggattgtggctgccaaagccatcgattacgaacagatgttgctgctaatggccggt
gtaaaatgggacataaaagaaattatgtcacaacacaatgtatatgtggatgtgcttcta
aaggaatttgagcagtttaacaagagacttggagaggtttctaggcttgttcgcatacct
ttgccggtctccaacgtcttgtgggagcactgcattcgactggctaaccgaactcttgtg
gaggggtaa
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