Lepisosteus oculatus (spotted gar): 102688857
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Entry
102688857 CDS
T07349
Symbol
psmc1
Name
(RefSeq) 26S protease regulatory subunit 4
KO
K03062
26S proteasome regulatory subunit T2
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
102688857 (psmc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
loc03051
]
102688857 (psmc1)
Proteasome [BR:
loc03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
102688857 (psmc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_2
AAA_22
nSTAND3
DUF815
AAA_5
RuvB_N
AAA_16
AAA_28
AAA_3
AAA_25
AAA_14
RNA_helicase
ATPase
IstB_IS21
TIP49
AAA_11
NPHP3_N
Mg_chelatase
AAA_33
AAA_24
AAA_7
Parvo_NS1
NB-ARC
PhoH
ABC_tran
NACHT
Prot_ATP_ID_OB_N
AAA_18
AAA_30
TsaE
Motif
Other DBs
NCBI-GeneID:
102688857
NCBI-ProteinID:
XP_015206105
Ensembl:
ENSLOCG00000009015
LinkDB
All DBs
Position
LG7:2799351..2805569
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AA seq
440 aa
AA seq
DB search
MGQSQSGGHGPGGGKKDDKDKKKKYEPPIPTRVGKKKKKSKGPDAASKLPLVTPHTQCRL
KLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH
AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP
QETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVA
NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG
GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT
KRRIFQIHTSRMTLADDVTLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK
KSKENVLYKKQEGTPEGLYL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgggtcagagccagagtgggggacacgggccagggggagggaagaaggatgacaaggac
aagaagaagaaatatgagccaccgattcccaccagggttgggaaaaagaagaagaagtcg
aagggaccagatgcagccagcaagttacctttagtaacccctcacacgcagtgtaggctt
aaactgctgaaactggagaggattaaagattacctgctgatggaggaggaatttatccga
aatcaagaacagatgaagcctttagaggagaaacaagaggaagagagatcaaaggttgat
gatctgagggggacaccaatgtctgttggaaccttggaggaaataatagatgacaaccat
gctattgtttctacatctgtgggatcagagcattatgtcagcattctgtcctttgtagac
aaggatctgctggagccgggttgctctgttttgctgaaccacaaggtccatgcggtcatt
ggggtcttaatggatgatacagatccgctagtcacggtcatgaaggtggagaaagcaccg
caggagacctatgctgatatcggcggtttggataaccaaatccaggaaataaaagagtcg
gtggagttacctctcacccaccctgagtattatgaggagatgggaatcaaacctccaaag
ggagttattctgtatggaccccctggtacaggcaaaactctgctggccaaggcggtggcc
aaccagacgtccgctacgttcctgcgggtggtggggtcggagctcattcagaagtacctg
ggcgacggtcccaagctggtcagggagctgttccgagtggccgaggagcacgccccgtcc
atcgtgttcattgatgaaatcgatgccatcgggaccaagaggtatgactcgaactccggc
ggagagcgtgaaattcagaggacgatgttggagctcttgaaccagctggatgggtttgac
tctagaggagatgttaaagtcatcatggcaacaaacagaatagaaaccctggacccagct
ctcatcaggccaggaagaattgatcgtaaaattgagttcccgctgccggatgaaaagacc
aagagacgaatcttccagatccacacaagcaggatgactctggctgatgatgtaacgctg
gatgacttaattttggccaaagatgacctctctggagcagacataaaggcaatttgcacg
gaagctggattgatggcgttaagagagcgcaggatgaaagtgacaaatgaagactttaag
aagtcaaaggaaaatgttctgtacaaaaaacaagaaggcacaccagagggactctaccta
taa
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