Lepisosteus oculatus (spotted gar): 102688904
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Entry
102688904 CDS
T07349
Symbol
pdgfc
Name
(RefSeq) platelet-derived growth factor C isoform X2
KO
K05450
platelet derived growth factor C/D
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04010
MAPK signaling pathway
loc04020
Calcium signaling pathway
loc04510
Focal adhesion
loc04540
Gap junction
loc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102688904 (pdgfc)
04020 Calcium signaling pathway
102688904 (pdgfc)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102688904 (pdgfc)
04540 Gap junction
102688904 (pdgfc)
09142 Cell motility
04810 Regulation of actin cytoskeleton
102688904 (pdgfc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
loc04052
]
102688904 (pdgfc)
Cytokines and neuropeptides [BR:
loc04052
]
Cytokines
Growth factors (RTK binding)
102688904 (pdgfc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
Motif
Other DBs
NCBI-GeneID:
102688904
NCBI-ProteinID:
XP_006629542
Ensembl:
ENSLOCG00000008204
UniProt:
W5MNK0
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Position
LG4:20994069..21099565
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AA seq
343 aa
AA seq
DB search
MILSFLFLLISSIQQHGSEAESSLSNKFQHTSMKDQNGVQNSQHEKVITVTGDGVVHSPE
FPHTYPRNKVLVWRLVAADENMQIQLTFDERFGLEDPEDGICKYDFVEIEEPSEGNILGR
WCGSQSAPGKQVSKGNQIRIRFKSDEYFPSEPGFCIRYSLLPRSLPVPESPAVLPPSLQT
MDMLIEAVSGLSTVEEVMKYLDPERWQLDLDDLYKPTWHILGKSFIHPRKSRVVDLNLLR
EEVRLYSCTPRNFSVSLREELKRTDTIFWPNCLLVKRCGGNCACCAQNCFECQCVPTKVI
KKYHEVLQLRHRSGGRGWQKSMTDVLLEHHEECDCMCKSDSDG
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgatcctgtcattcttattcctccttatatcgtcaatccaacaacatggatcggaagct
gaatccagcctcagcaacaagtttcagcataccagtatgaaagatcaaaacggagtacaa
aattctcagcatgagaaagtcattacagttacaggagatggagttgtgcacagtccggaa
tttccccatacctatcctcggaataaagtgctagtctggagactagttgcagcagatgaa
aacatgcagatacagctaacatttgatgaaagatttgggctcgaggacccagaagatggc
atatgcaagtatgactttgtagaaattgaagagccttcagaaggcaatattctgggtcgg
tggtgtggatcccaatctgccccaggaaagcaggtatccaaagggaaccagattaggata
cgctttaaatctgatgaatactttccttcagagccaggattctgcattcggtactccctt
cttcccaggagcctacctgtaccagaatcccctgcagtgctgccaccctctctgcagact
atggacatgttaattgaagcagtttctgggttaagtacagtggaggaggttatgaaatac
ttggatcctgaaagatggcagctggatttggacgacttgtataagccaacatggcacata
cttggcaagtcattcatccatcccaggaaatccagagtggtggatcttaacctattgagg
gaagaagtgagactgtacagctgcaccccacgcaacttttctgtgtctctccgtgaggaa
ctgaagcgaactgacaccatcttctggccaaactgtcttctggtcaagcgatgtggtggg
aactgtgcctgctgtgcccagaactgctttgaatgtcagtgtgttcccaccaaggtcatc
aagaaataccatgaggttctccaactaagacatagaagtgggggaagaggatggcaaaaa
tcaatgacagacgtactcttggaacatcatgaagaatgtgactgcatgtgcaaaagtgat
tcagatggataa
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