Lepisosteus oculatus (spotted gar): 102688937
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Entry
102688937 CDS
T07349
Symbol
rnf43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
102688937 (rnf43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
loc04121
]
102688937 (rnf43)
Enzymes [BR:
loc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102688937 (rnf43)
Ubiquitin system [BR:
loc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102688937 (rnf43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
ATP1G1_PLM_MAT8
zf-RING-like
Vpu
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
102688937
NCBI-ProteinID:
XP_006641053
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All DBs
Position
LG22:3387029..3484851
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AA seq
808 aa
AA seq
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MTVSRRQLPGLWPWLLMAALQVVLGQTGLELAAAVESERSAPKAVIKVTLLKQEPAGKPI
TLEGVFAGASVRASAEGKLMQSHPLSLCNTSDDERQESIFISIVKLENPEHKVPRCQTLM
EKAQLALDRGAQAVIFDVTDDATAAAELRDPRGLPRPVVLVQARDAEVLMGLVNRNEEAM
VQIEVKIEPNKWPHYDVGILLTVVLAMLAIIIIFAFRFKCKQNRNQDSIHQQTVRAINRL
GTRTYTSQGRSRNQRTRGGRDSGSSSTSTPVCAICLEEFLDGQDLRIISCSHEFHKECVD
PWLLQHRTCPLCVHNIMETDGVPQSAHPSRHQQNMEHNQRVLLLHHYPRHPPLHQHPIAI
PVHHYPRPPTGQLGHYGISPPLDPRALRCVPSRHLGAGPGRCSYHRNEGLLGHYHRTSTA
CRPPANPEPHCQPRSCAPAYCPSCAAPRGGSSSRLPFAPGRGAAPSRQDDGSCSGGSYRT
ERSGYLADGPASDSSSGPCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDYDPFVYCG
QGQGQGQGQGRGAGDSRDVGARPRSLDSMVNRTCPEEKVFSHVHYHRHRHHHYDEVDRGQ
GPDRGSDEELNAGAAPVPDSMIPEADPSRCQPCQCPKPAPDPHRADVPESELPADACSGT
ATLPPPAPQPPCCHHGPSRHHRRKKGGVPDGPAVHFHQSLDTQEDCSIYVHYGQGAGYCC
PPDMPPLLPVPLILDSAGSADWPCCSGARVVWRQQLQQAESEPQLQATGTALDRPHRRLQ
SGPEAPPDMCLYCQNVHTHQGSEEESGV
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtaagtcggcggcaactgcccgggctctggccgtggctgctaatggcggcccta
caggtggtgctcgggcagacgggtctggagctggcggcggcggtggagtcggagcgatcg
gcacccaaagctgtcattaaggtgacactgctgaaacaggagccggcgggcaagcccatc
actctggaaggagtgttcgccggcgccagcgtaagagcttccgctgaaggaaagcttatg
cagtcccatccactgtccctgtgcaacaccagcgatgacgagcgacaggagagcatcttc
atcagcatagtgaagctggagaaccctgaacacaaagtcccgcggtgccagacgctgatg
gaaaaggctcagctggcattggaccgaggggctcaggcagtcatttttgatgtcactgat
gacgctactgcagcagctgagctgcgtgaccccaggggcctgcctcgtcccgtggtgctt
gtccaggccagagacgccgaggtcctgatgggcctggtcaacaggaacgaggaggccatg
gttcagattgaggtcaagattgagccaaacaaatggcctcactacgatgtgggaatcctg
ctcactgtggtcctggccatgctagccatcatcatcatcttcgctttccgattcaagtgc
aaacagaacaggaaccaggattccattcaccagcagacagtccgtgccatcaaccgattg
ggcacgcggacgtacacttctcagggtcgctcgaggaaccagaggacccgaggtggcagg
gactcgggcagcagcagcacctccactcctgtgtgcgctatctgtctggaggagttcctg
gatgggcaggacttgcgaattatttcttgttctcacgaattccacaaggagtgtgtggac
ccctggctgctgcagcatcgcacctgtcccctctgcgtgcacaacatcatggaaactgat
ggcgtccctcagtcagcgcatcccagcaggcaccagcagaacatggagcacaaccagagg
gtcctgcttctccatcactacccccggcacccccctctccaccagcaccctatcgccatc
cctgtgcaccattacccccggccgcccaccgggcagctggggcactatggcatctccccc
cccctggaccccagagccctccgctgcgtgcccagcaggcatctgggggcgggcccaggc
aggtgcagctatcaccggaacgagggccttctgggccactatcacaggactagcaccgcc
tgccggcccccagcaaacccggagcctcactgccagccccgcagctgcgcccctgcctac
tgcccctcctgcgcggctccgcgcggcggctccagctcccgcctccccttcgcccccggc
aggggcgcggctcccagccggcaggacgatggcagctgctcgggggggagctaccggaca
gaacggagtggctacctggcggacggcccggccagcgactccagctcaggcccctgtcac
ggctcctccagcgactccgtcctcaactgcacagacgtcagcctccagggcgtttacggc
agctggtccactttccgcagctccctgagcagcgactacgaccccttcgtctactgcggg
caggggcaggggcaggggcaggggcagggcaggggcgcgggggacagccgggacgtaggg
gccaggcccaggtctttggactccatggtgaaccggacctgtccggaggagaaggtgttc
agccacgtccactaccaccggcaccggcaccatcactacgacgaggtggaccgcgggcag
gggccggacaggggatcggacgaggagctgaacgccggagcggctcccgtcccagatagc
atgatcccggaggccgacccttcccgctgccagccctgccagtgccctaaaccggcccct
gacccccacagggcggatgtgccagagagcgagctgccagcggacgcttgctcgggcacc
gccacgctccctcccccagctccccagccaccctgctgtcaccacggacccagccggcac
caccgccggaaaaagggtggcgtccccgacggcccggctgtgcactttcaccagagcctg
gacacgcaggaggactgcagcatttacgtccactacgggcagggggcgggctactgctgc
cccccggacatgcctcccctcctgcccgtgcccctgatcctggactcggccggctcggcg
gactggccgtgctgctccggagcccgtgtggtgtggcggcagcagctccagcaggcagag
tccgagccccagctccaggccacaggaaccgccctggacaggccccacaggcggctccag
tcagggcccgaggctccgccggacatgtgcttatactgccaaaatgtacacacccatcag
ggatcagaagaggagtccggggtgtga
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