KEGG   Lepisosteus oculatus (spotted gar): 102688978
Entry
102688978         CDS       T07349                                 
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
  KO
K16271  E3 ubiquitin-protein ligase RLIM [EC:2.3.2.27]
Organism
loc  Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:loc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:loc04121]
    102688978 (rlim)
Enzymes [BR:loc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     102688978 (rlim)
Ubiquitin system [BR:loc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    102688978 (rlim)
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-RING_11 zf-C3HC4_2 zf-C3HC4 zf-ANAPC11 zf-RING_5 zf-C3HC4_3 SPT6_acidic zf-RING_UBOX Prok-RING_4 zf-RING_16 zf-RING_4 zf-RING-like
Other DBs
NCBI-GeneID: 102688978
NCBI-ProteinID: XP_006632669
Ensembl: ENSLOCG00000013643
LinkDB
Position
LG7:complement(20792220..20805661)
AA seq 619 aa
MENSDSAEQGGSEQSEAQRQRQRDRLNREEAFYQFVNNLSEEDYRLMRDNNLLGTPGEIT
EEELLSRLQQIKDGPEQQNANERSEESAGAEGSEEGSNGDTILDWLNSVRRTGNTTRSGH
RGNQSWRAVSRTNPNSGDFRFSLEINVNRNITEQQARAEGEPLEGETEPVPGTAVVEQPM
ETVAAEVEEPAIIVHPEAEPPESPLLIRPPIEQLDLPDPQSPPVEEAVRRGQRRARSRSP
EQRRTRARNERSRSPLNHDGVEGPRRARRSTSSQSPHHISEPQMEGSSRTRQHILSRQST
VEYDAQLDSASAEPVNAPQEVENPSDGGAGVETNSSSRRPPTIMLDLQVRRVRPGEYRQR
DSIASRTRSRSQTSNNTFLYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRISDAGLSE
ATSMALQTMIRQIMTGFGELSYFMDSDSDSDSNRGPSQSTEPTELHNTTNSTNTVNSSQE
STEPRTAEERQDVASESASVPTVGREGRAGRSPISLEEPGSLPFLRLAHFFLLNDDDDDQ
PRGLTKEQIDNLSTRNFGENDALKTCSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSEN
STCPICRRAVLVSTRESVV
NT seq 1860 nt   +upstreamnt  +downstreamnt
atggagaactcggacagtgcggaacaaggaggaagcgagcagtcggaagctcaacgtcag
cggcagagagaccggctcaacagggaagaggctttctaccagtttgtgaacaacctgagt
gaggaggactaccggctgatgagagacaataacctgttgggaacccctggtgagattaca
gaagaggagttgctgagtcgccttcagcagatcaaagatgggccagagcagcagaatgct
aatgaacgaagtgaagagagtgctggagcagaggggtcagaggagggttccaatggagat
actattctggactggttgaactcggtaagacggacaggaaacacaacccggagtggccac
aggggtaatcagtcatggagagcagtgagccgaaccaacccaaatagtggtgacttccgt
ttcagcttggaaatcaatgtgaaccgcaacattacagagcagcaggccagggcagagggg
gagccgcttgagggggaaacggagccagtacctgggactgctgtagtggaacagccaatg
gaaacggtcgcagcagaagtggaggagcctgccatcattgtccatcctgaagcagaacct
cctgagtctcctctgctgatcaggccacccattgagcagcttgatttgccagatccacag
agcccccctgttgaggaggcagtccggagaggtcagcgaagggccagaagccgcagtcca
gagcagcggaggaccagagcccggaacgagaggagccgctcaccgttgaaccacgacggc
gtggagggcccgcggcgagcccgacgcagcacatcctctcagagtccccatcacatttca
gaacctcaaatggaaggaagctccagaactaggcagcacattctttcgagacagagcact
gtggagtatgatgcccagctggacagtgcttcagcagagcccgttaatgccccccaggaa
gtggagaacccctcggatgggggggctggtgttgaaacaaactcctccagcagaagaccc
ccgaccatcatgctggaccttcaggtgcggagggtgcggccaggggagtaccgccagaga
gacagcattgcaagccggaccaggtctcgctcccagacctctaacaacactttcttatat
gagagtgaacgaggcgggttccgtcgtaccttctcgagatcggaaagagcaggggtgcgg
acgtatgtcagcacaatccgcattcccatccggcggatatctgatgctggacttagtgag
gccacatccatggccctacagaccatgattcggcagataatgacagggtttggcgaactg
agttattttatggacagtgacagtgactcggactctaaccggggacccagccagtccacg
gagcccacagagctacacaacaccaccaactctaccaacaccgtcaactccagccaggag
agcacggagccacggaccgcagaggagcgtcaggacgttgccagcgagagtgcttcagtg
ccgacagttggtagagaaggtcgtgctggccgtagccctatcagcctcgaggagcccgga
tccctgccttttctccgactggcacacttcttcctcctcaatgacgatgatgatgatcag
ccaaggggactcaccaaagaacaaattgacaacctgtcgacccggaattttggggagaat
gacgctctgaagacttgcagtgtttgtatcacggagtacgcggaagggaacaagctgcgc
aagctcccctgctctcatgaatatcatgtccactgcattgaccgttggctttcagaaaac
tccacttgtcccatctgccggagggcagtccttgtttccactcgcgagagtgtggtctaa

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