Lepisosteus oculatus (spotted gar): 102688978
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Entry
102688978 CDS
T07349
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
loc04121
]
102688978 (rlim)
Enzymes [BR:
loc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102688978 (rlim)
Ubiquitin system [BR:
loc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102688978 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
SPT6_acidic
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
102688978
NCBI-ProteinID:
XP_006632669
Ensembl:
ENSLOCG00000013643
LinkDB
All DBs
Position
LG7:complement(20792220..20805661)
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AA seq
619 aa
AA seq
DB search
MENSDSAEQGGSEQSEAQRQRQRDRLNREEAFYQFVNNLSEEDYRLMRDNNLLGTPGEIT
EEELLSRLQQIKDGPEQQNANERSEESAGAEGSEEGSNGDTILDWLNSVRRTGNTTRSGH
RGNQSWRAVSRTNPNSGDFRFSLEINVNRNITEQQARAEGEPLEGETEPVPGTAVVEQPM
ETVAAEVEEPAIIVHPEAEPPESPLLIRPPIEQLDLPDPQSPPVEEAVRRGQRRARSRSP
EQRRTRARNERSRSPLNHDGVEGPRRARRSTSSQSPHHISEPQMEGSSRTRQHILSRQST
VEYDAQLDSASAEPVNAPQEVENPSDGGAGVETNSSSRRPPTIMLDLQVRRVRPGEYRQR
DSIASRTRSRSQTSNNTFLYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRISDAGLSE
ATSMALQTMIRQIMTGFGELSYFMDSDSDSDSNRGPSQSTEPTELHNTTNSTNTVNSSQE
STEPRTAEERQDVASESASVPTVGREGRAGRSPISLEEPGSLPFLRLAHFFLLNDDDDDQ
PRGLTKEQIDNLSTRNFGENDALKTCSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSEN
STCPICRRAVLVSTRESVV
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggagaactcggacagtgcggaacaaggaggaagcgagcagtcggaagctcaacgtcag
cggcagagagaccggctcaacagggaagaggctttctaccagtttgtgaacaacctgagt
gaggaggactaccggctgatgagagacaataacctgttgggaacccctggtgagattaca
gaagaggagttgctgagtcgccttcagcagatcaaagatgggccagagcagcagaatgct
aatgaacgaagtgaagagagtgctggagcagaggggtcagaggagggttccaatggagat
actattctggactggttgaactcggtaagacggacaggaaacacaacccggagtggccac
aggggtaatcagtcatggagagcagtgagccgaaccaacccaaatagtggtgacttccgt
ttcagcttggaaatcaatgtgaaccgcaacattacagagcagcaggccagggcagagggg
gagccgcttgagggggaaacggagccagtacctgggactgctgtagtggaacagccaatg
gaaacggtcgcagcagaagtggaggagcctgccatcattgtccatcctgaagcagaacct
cctgagtctcctctgctgatcaggccacccattgagcagcttgatttgccagatccacag
agcccccctgttgaggaggcagtccggagaggtcagcgaagggccagaagccgcagtcca
gagcagcggaggaccagagcccggaacgagaggagccgctcaccgttgaaccacgacggc
gtggagggcccgcggcgagcccgacgcagcacatcctctcagagtccccatcacatttca
gaacctcaaatggaaggaagctccagaactaggcagcacattctttcgagacagagcact
gtggagtatgatgcccagctggacagtgcttcagcagagcccgttaatgccccccaggaa
gtggagaacccctcggatgggggggctggtgttgaaacaaactcctccagcagaagaccc
ccgaccatcatgctggaccttcaggtgcggagggtgcggccaggggagtaccgccagaga
gacagcattgcaagccggaccaggtctcgctcccagacctctaacaacactttcttatat
gagagtgaacgaggcgggttccgtcgtaccttctcgagatcggaaagagcaggggtgcgg
acgtatgtcagcacaatccgcattcccatccggcggatatctgatgctggacttagtgag
gccacatccatggccctacagaccatgattcggcagataatgacagggtttggcgaactg
agttattttatggacagtgacagtgactcggactctaaccggggacccagccagtccacg
gagcccacagagctacacaacaccaccaactctaccaacaccgtcaactccagccaggag
agcacggagccacggaccgcagaggagcgtcaggacgttgccagcgagagtgcttcagtg
ccgacagttggtagagaaggtcgtgctggccgtagccctatcagcctcgaggagcccgga
tccctgccttttctccgactggcacacttcttcctcctcaatgacgatgatgatgatcag
ccaaggggactcaccaaagaacaaattgacaacctgtcgacccggaattttggggagaat
gacgctctgaagacttgcagtgtttgtatcacggagtacgcggaagggaacaagctgcgc
aagctcccctgctctcatgaatatcatgtccactgcattgaccgttggctttcagaaaac
tccacttgtcccatctgccggagggcagtccttgtttccactcgcgagagtgtggtctaa
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