Lepisosteus oculatus (spotted gar): 102689222
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Entry
102689222 CDS
T07349
Symbol
med16
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 16
KO
K15159
mediator of RNA polymerase II transcription subunit 16
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
loc03021
]
102689222 (med16)
Transcription machinery [BR:
loc03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
102689222 (med16)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med16_bridge
Med16_N
Med16_C
WD40
Beta-prop_IFT140_1st
WD40_WDHD1_1st
Beta-prop_WDR35_TULP_N
ANAPC4_WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
102689222
NCBI-ProteinID:
XP_006639860
Ensembl:
ENSLOCG00000001808
LinkDB
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Position
LG19:complement(3370576..3381001)
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AA seq
834 aa
AA seq
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MDIAYVCEWEKRPKSNHCPSIPLVCAWSCRNLLAFTTDLKNEEEEKDLTHMIHIIDSEHP
WDVYSINSGHTEVISCLEWDQSGSRLLSADGDGQIKCWAMTEHLVNSWESTLGSAVEGDP
IVALSWLHNGVKLALHVEKSGSTNFGEKFSRVKFSPSLTLFGGKPMEGWMAVTVSGLVTV
SLLKPNGALLTASESLCRLRGRVALADIAFTGGGNIVVAATDGSSSAPVQFYKVCVSVVN
EKCRIDTELLPSLFMRCTTDPARKDKYPAVTHLKFLTRENSEQVLLCASSQLGSIVECWS
LRKEGLPVNNIFQHRSPVVGEKQPMILKWRILSATNDLDRVSAVALPKLPISISNTDLKV
ASDTKFCPGLGLALAFHDGSIHILHRLSLHTMGVFYGSSSSNPQRVGEEPALKRQRGGGP
TTHFKALQFSCTSLALVGVDNHGKLHMLRVSPSMGQMLDINTLLRHLLFLLEYCMVTGYD
WWDVLLHVQPNMVHNLVEKLHEEYMRQNQALQQVLSTRVVAMKASLCKLSSATAPRACDF
HAKLLLIAISSTLKSLLRPHLLNTPDKSPGDRLAEICAKNTDTDIDKVMINLKTEEFVLD
ASTLQSLQQLIQWVGDFVLYLLANLPNQGSIVRPGFGFLRDGASLGLLREMMVVIRIWGL
LKPGCLPIYTATSDNQDSMFLLFRLLTKLWLCSRDESHPQEPDEPLIDECCLLPSQLLVP
AMDWLPVSDGIICKLQGKHPLRLQFGKPYSLPGLNSGTQVEIFTRTPGSQRMDNLRCLHM
GVCPTEDSKACTRCGCVTMLRSPNKTTAVKQWEQRWIKNCLCGGLWRRIPTTIS
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggatattgcctacgtgtgtgagtgggagaagaggcctaaaagcaatcactgcccctct
atccctcttgtgtgcgcctggtcctgcagaaacctcctcgccttcactactgacctcaaa
aatgaggaagaagaaaaggacctgacccacatgattcacatcattgactccgagcatcca
tgggacgtttattcgatcaattcgggacacactgaggtcatttcctgtctggaatgggat
cagtcaggctcccggttgttgtcggctgatggggacgggcagatcaagtgctgggcgatg
acagaacacctggtgaacagctgggagagcacgctgggtagcgccgtggagggcgacccc
attgtagccctgtcttggctgcacaacggagtcaagctggcactgcacgtggagaagtcg
ggctccacgaacttcggggagaagttctcccgggtgaagttctccccctcgctgacgctg
ttcggcgggaagcccatggagggctggatggcggtgacggtgagcggcctggtgacggtg
tcgctgctcaagcccaacggcgcgctgctgaccgccagcgagagcctgtgccggctgcgg
ggccgcgtggcgctggccgacatcgccttcacgggcgggggcaacatcgtggtggcggcc
acggacggcagcagctcggcgccggtccagttctacaaggtgtgcgtgagcgtggtgaac
gagaagtgccgcatcgacaccgagctgctgccctccctcttcatgcgctgcaccaccgac
cccgcgcgcaaggacaagtaccctgccgtcacccacctgaagttcctgaccagggagaac
tctgagcaggtgctgttgtgtgcatccagccagctgggcagcattgtggagtgctggtca
ctacgcaaagaggggcttcctgtcaacaacattttccagcaccgctctcctgtcgtggga
gagaagcagcccatgatcctcaagtggcgtatcctgtctgccaccaacgacctggaccgt
gtctctgcagtggcgctgcctaaactgcccatctccatctccaacaccgacctcaaggtg
gccagcgacacgaagttctgccctggcctcggtctggcgctggccttccacgacggcagc
attcacatcctgcaccggctgtcactccacaccatgggcgtcttctacggctcctcctcc
agcaacccccagcgcgtcggcgaggaacccgccctcaagcggcagcgcgggggcggcccc
accacgcacttcaaggccctgcagttctcctgcacgtcgctggcgctggtgggcgtggac
aaccatggcaagctgcacatgctacgggtgtccccgtccatgggccagatgctggacata
aacaccctgctgcgccacctcttgttcctgctggagtactgcatggtgacgggctatgac
tggtgggatgtgctgctccacgtgcagcccaacatggtgcacaatctggtggagaagctg
cacgaggagtacatgaggcagaaccaggccctgcagcaggtgctgtctacgcgagttgtg
gccatgaaggcgtccctgtgtaaactgtcctccgccacggcgcccagggcctgcgacttc
cacgccaagctcttgctcattgccatcagctccaccctcaagtctctgctgagacctcac
ctcctcaacacccctgacaagagccctggggaccggctggctgagatctgtgccaagaac
accgacacggacatcgacaaggtgatgatcaatctgaagacggaggagttcgtgctggac
gcttctaccctgcagtcgctccagcagctcatccagtgggtgggagattttgtgctctac
ctgctcgccaacttgcccaatcagggatccattgtccgccctggtttcgggtttctgcgg
gacggggcctctctggggttgctgcgtgagatgatggtggtgatccggatctggggcctg
ctgaagcctggctgcctgccgatatacaccgccacctccgacaaccaggacagcatgttc
ctgctcttccgccttctcaccaagctctggctctgctctcgagatgagagccacccacag
gagccggacgaacctctgatcgacgagtgctgcctgctacccagccagctgctggtgccc
gctatggactggcttcctgtcagcgatggcatcatctgcaagctgcagggcaagcacccc
ctgcgcctgcagttcgggaagccctacagcttgccagggctcaactcgggcacgcaagtg
gagattttcacgaggacccctggatcacaaaggatggataatctgcgctgcctgcacatg
ggcgtgtgtcccacggaagacagcaaggcctgcaccaggtgcggctgcgtcaccatgctg
cggtctcccaacaagaccacggccgtgaagcagtgggagcagcgctggatcaagaactgc
ctgtgtggggggctgtggaggaggatccccaccacgatctcctga
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