Lepisosteus oculatus (spotted gar): 102689360
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Entry
102689360 CDS
T07349
Symbol
pdzrn4
Name
(RefSeq) PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
loc04121
]
102689360 (pdzrn4)
Enzymes [BR:
loc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102689360 (pdzrn4)
Ubiquitin system [BR:
loc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
102689360 (pdzrn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
CC142_N
DUF3316
Motif
Other DBs
NCBI-GeneID:
102689360
NCBI-ProteinID:
XP_006642953
Ensembl:
ENSLOCG00000001340
UniProt:
W5LZG2
LinkDB
All DBs
Position
Unknown
AA seq
778 aa
AA seq
DB search
MGCNLCTLQKREDHYKLLYEIAQVNGKDLSKATHEEAVEAFRSAKEPIVVQVLRRSPISK
SHGNSQEVQLVDVCTQTDITFEHIMALSKLRPSSPPVPDICPFLLSDSCHSLHPMEHEYY
EGTEFLSNMPVDGDRADEFEYEEVELCRMNSQEKLGLTLCYRTDDEEDIGIYVSEVGPNS
IAAIDGRIREGDRILQINGCDVQNREEAVALLSSEDCRNIVLLVARPDIQLDEGWIDDEH
TEFLEELKMEMLEDQHKDIVQYPSNELQEPKKTEEDDGTTDTATTSSNNQEKDSGVGRTD
DSVRNDESSEHENLADVQQQASVKDKQEMEQSQDMLGSNDIQCIESFASGEHIDSDCIRA
QEEDCDRFRQLLELKCKIRNSGEYDLYYSRSSTIECSLKEQDGVERELRLLNEELRSIEL
ECQNIMQAHKLQKARDQYSGMWSVKDESFHNFNTSMDLQGSKLAEINEHPEKSDKDSSSA
YNTAESCRSTPLAMDRSPDHSLQRMVSITNRKNLRSSMTTCQMTSSQGNKGAFLGKAKTS
GQNSTTESDEIVPDDKKRSEQERIGLQQIPYLSPCHSSQYRHANIPAHARHYQSYMHLIQ
QRSAVEYAQSQLSLVSMCKDLQKSSEPKMEWKVKIRSDGTRYITKRPVRDKILKERALKI
KEERSGMTTDDDMMSEMKMGKYWSKEERKQHLVRAKEQRRRREFMMRSRLECLKESPQSG
SEGKKEINIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPEGTKVHNAFLSVTTV
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatctgtgcactttacagaaaagagaggatcactacaagctgctctatgaa
attgcgcaggttaatggaaaagatctttcaaaggccacacatgaggaggcagtggaagct
tttcgcagtgccaaggaacccattgtagttcaagttttacgacgaagtcctatcagcaag
agccatgggaattctcaggaagttcagcttgtggatgtatgcacacagacagacatcact
tttgaacacattatggctctctccaagttaagaccttcaagcccaccagtacctgacatc
tgtcccttcttgctttctgacagctgccattcactgcatccaatggagcatgaatactat
gaaggcacagaatttctatccaatatgccagtggatggagacagggcagatgagtttgag
tacgaggaagttgagttgtgtcgcatgaacagccaggagaaactgggcctgaccctctgc
tatcgaacagatgatgaggaggacattgggatctatgtcagtgaggttggtccaaacagc
atagctgccatagatggtcgtatcagagagggggatcggattttacagataaatggctgt
gatgtgcagaatcgtgaggaggcagtggcattgctctcaagtgaggactgcagaaacatt
gtattgctggttgccaggccagacatacagctggatgaaggatggattgatgatgagcat
actgaatttttagaagagctgaaaatggagatgttagaagaccaacataaagatatagtg
caatatccttccaatgaattgcaggagccgaaaaagacagaggaggatgatggcacaaca
gacaccgccaccacctcctccaacaatcaggagaaggacagcggagtgggtcgcaccgat
gacagtgtacgcaatgacgagagctctgagcatgagaacttagcagatgtccagcaacaa
gcttctgtcaaggacaaacaagaaatggaacagagccaggacatgctgggtagcaatgac
atccagtgcattgagagctttgcgtctggtgagcacattgactcagattgtatcagagca
caagaagaagactgtgacagattccgccagctcctggaactgaagtgtaaaatcagaaat
agtggtgagtatgacctctactacagtcgcagcagtaccatcgaatgcagcctgaaggag
caagatggtgttgaaagggagctgcgcttgctcaatgaagaacttaggagcattgagctt
gagtgccagaatatcatgcaagctcacaaactccaaaaagccagagatcagtattctgga
atgtggtccgttaaagacgaaagttttcacaacttcaacaccagcatggacttgcaggga
agtaagttggctgaaattaatgagcatcctgagaaatcagacaaggacagctccagcgcc
tacaatactgctgaaagctgccgtagcacacctttggccatggaccgctctcctgatcat
tccctgcaaagaatggttagcattaccaacagaaaaaatctgaggagctctatgacaaca
tgccaaatgacctctagccagggaaacaaaggagcatttctgggcaaagccaaaacctct
ggacagaacagcaccactgagtcagatgaaatagtacctgatgacaaaaagcgatctgag
caagagaggattggccttcagcaaattccatacttgtcaccatgccacagctcgcagtac
agacacgctaacatacctgcacatgccaggcattatcagagttatatgcatctcattcag
cagagatcagcagtggagtatgcccagagccagcttagcctcgttagtatgtgcaaagac
ttgcagaaatcttcagagcctaaaatggagtggaaggtgaaaatccgtagcgatggaaca
aggtacataactaagaggccagtgagagacaaaatcctgaaggaacgtgccttaaaaatc
aaagaggagcgcagcggcatgactacagacgatgacatgatgagcgagatgaagatgggg
aagtactggagcaaggaggagaggaagcagcatctagtgagggcaaaagagcagcgacgg
cggcgggagttcatgatgcgcagcagattagagtgcctcaaggagagcccccagagtggc
agcgaagggaaaaaagagatcaacattattgaactcagccacaaaaagatgatgaaaaaa
cgaaacaagaagatactggacaactggatgacaatccaagagctgatgacacatggggcc
aagtcaccagagggcacaaaagtacacaatgccttcttgtctgttactactgtataa
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integrated database retrieval system
