Lepisosteus oculatus (spotted gar): 102689383
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Entry
102689383 CDS
T07349
Symbol
srcap
Name
(RefSeq) helicase SRCAP
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102689383 (srcap)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
loc03036
]
102689383 (srcap)
Chromosome and associated proteins [BR:
loc03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
102689383 (srcap)
SWR1 complex
102689383 (srcap)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
HDA2-3
Motif
Other DBs
NCBI-GeneID:
102689383
NCBI-ProteinID:
XP_015201644
LinkDB
All DBs
Position
LG5:4041465..4069512
Genome browser
AA seq
2715 aa
AA seq
DB search
MDTGDKPRETPAGAPGAADCPLQTDGPSPWPLSAAPAQLPDTPPFGDPPARAAEPRADST
ASGPPGAAVEVPARAQASGLGTGEPSPAQSKGQGTPGRESTFLKLNKWITDRISPARPSS
SSSSFSLSGWTPPVERHFTPLRGPHGKFISPPQRAPSTASSPGSPADSAQRHARGERSHS
DIAELAKHEAEIEHRTAALKREGFWSLKRLSRVAEPSRPKVHWDYLCEEMQWLSADFAQE
RRWKRGVARKVVRMVMRHHEELRQKEERARREEQAKLRRIASSIAKEVRAFWSSVEKVVQ
FKQQSRLEEKRKKALDLQLDFIVGQTEKYSDLLSQSLSEAPAGSVLLPRHGAPVRPAPEE
DDGDFEPQCEEEDDEETIEVEEQQEGNDAEAQRREIELLRQEGELPLDQLLQTLRAQTEA
QDSSEGEGSHSTSRAPEEDEDDEFAANEDEAEDEEDTIAAQEVVEGDADHSQELSDLARE
GEMSIEELMERYSGAYAEDFEVPSASESSSSSEEEQEEADEESVNTGEREEEDQSEAAEG
DQSEEEESHCSDSSAALDSDDGRSSPGGDVGVAFLLKGDRSPPTPGEKVPIAPRPKKEIS
DIAATAESLQPKGYTLATTQVKTPIPFLLYGTLREYQHIGLDWLVTMYEKKLNGILADEM
GLGKTIQTISLLAHLACEKGTESLGITGHSSLGAVGILGGVGILEWELLIWGIQRRLLLT
GTPLQNSLMELWSLMHFLMPHVFQSHREFREWFSNPLTGMIEGSQEYNEGLVKRLHKVLR
PFLLRRIKADVEKQMPKKYEHVVRCRLSKRQRFLYDDFMAQASTRETLASGHFMSVINIL
MQLRKVCNHPNLFDPRPIHSPFITPRILYTTASLALRGLDTHPFQRCDLSMFDLIGLEGR
VTRYQADVFLPRRKVSRLLVQEVMDSPDPPPRPKPVRMKVNRMFQPLPKADGRTVVLVNS
PRPPGPAPSPAPSPSPLLRPPVAPESAPVAAAPLPQQQHPAPPVTVCSVPPAALARPPLV
PAGPSAVCVGGTGVRPGTPLPVLAVRPPGSPGTLLRTPTAPAASAPPLSGYATPTGGTVT
QRVLLTPDMQARLPSGEVLSIAQLASLASRPVQSSQGSKPVTFQLQGNKLTLSGAQLHQV
NMSQPRPVQGNVVHLVSSGGQHHLISQPAQVAVIQTVSQSSAGVVSTHQPTLPPGPPGLS
LPLNATQVPSSMVSGSGIVKIVVRQSAGKEGVPTLAVPPTPLRPVLRVLQGPAAGTEQAR
LSATPGRDDSDVITLRVATPSGASPHLGGGLSTPRVRTQVPPPPRSPFYMSWLADRRKAQ
REARLSRILRVNEQHCSARPIYGQEVLRFLTVLDRPSAPSPDAPGHWLSSGYAHCLNAQS
QAPDRYWERSEALSRVIQTPEQRIEQLSNVIDRFIFVIPPVEAPAVALHTSHPPPWLAHR
EAVFRERLRAELSPRTACLHRVHCNMRTQFPDLRLIQYDCGKLQTLHMLLRRLKAGGHRV
LIFTQMTRMLDVLEQFLNYHGHIYLRLDGSTRVEQRQALMERFNADRRIFCFILSTRSGG
VGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQ
KRMLGDMAIEGGNFTTAFFKQQTIRELFDLTEGERKEMEQPNQAPSRQEEEEALNNKHTS
ILEQALCRAEDEEDIAAASQAKAEQVAELAEFNENIPLEEGSEGAGREQEEEELSKAEQE
IAALVEQLTPIERYAMNFLEASLEDVCKEELKQAEEQVEAARKGLDQAKEEAFKLPSDDE
APSAPRALPEDAPHRRARKTKEKSALCTRASGRLRPRTPAAEGADELPPAPARSPGEVTG
DSPPQPRIDVLPTTLARPEPEAGARTEDNMPVQEASTACVSAPAPSLAPTLASASANPNP
TPAPAPAPAPAQTLASASANPNPTPTPAPAPVQAPLVPAPEEDSTPQHRDVPEPAGLALQ
GDTKDELHLPSPPPLTRLATPEAHQLPEPAEPAPPSPQNNLLPDAGVGQPEGGGGGLPSP
GPSSPPQPAACQAPRDPQPQVSPLSVPSAAPTSPCGETERTAPLSPPATPVPSSEPPPPS
QRGGGPHSPPAPLHEEPEPHAAPQPRADRALEQPVSTREGGSAPGSPVKSERLDSCGTAA
AMLPGSLVYSNADEAGQSSSPGHRAAELGTPPPQPPPASPLPSPGSSPPGSPPLPQAPAR
SPRKRVSADGEVLNSLQEGSPSAKVLRKLPGRLVTVVEEKELKRRRRGASGPRRDAAGEA
DRGADPAAEDGAMRGRPRKDQRPPEMAADCPASPSASRSPAAAPTSPLLRSSPPDPSCLP
VPAETLPPSPHRQEAQLEGEDKEAALKQSPTESRVGEEGGNGKMAPPEESKSKGSENRRP
GKRRDSESRDSEDRRPGKRRDSESGAEADEELPPHRKKRRVTRSSQEEHSPSPSLRRVTR
AAVRGRSPRPEEQRRRSRARQGGKRGKRGRRAAQEEETEPPQHRRSSQSQESTRSSSASS
SSSSSCSASTRSSSLSTGKKGGRGKAAVKRKGEEVETEEEEDAPQRRVTRSSRTDALAAT
ATSQSSSPSSSDSEASGGAGERRLTRASQRRPEGRRREAERQGEGGDRRRAPKNLKRRER
PREAGSSGRTVGGTGGERGVGAKPAGVPLDELGYKMPRSLRRRHTLQGAGEPEGGPPESE
VEAAMSMSGRAGERR
NT seq
8148 nt
NT seq
+upstream
nt +downstream
nt
atggacactggcgacaagccgagggagacgcccgcgggcgcccccggcgccgccgactgc
cccctccagaccgacgggccgtccccctggcccctgtctgcggcccccgcgcagctcccc
gacacgccgcccttcggggatccccctgcccgtgctgctgaaccccgggcggacagcaca
gcctcggggcctccgggcgctgccgtggaggtgcccgcccgggcccaggccagcggactc
ggaaccggagagcccagtccggcacagtccaagggacagggcacgccaggcagggagagc
acgttcctgaagctgaacaagtggatcacggacaggatatcgccggcccgcccctcttcc
tcctcctcctccttcagcctcagtggctggacgccccccgtggagcgccacttcaccccc
ctgcgggggccccacggcaagttcatctccccccctcagcgggccccttccactgcctcc
tcgccgggctctccggccgactccgcccagcgccatgcccggggagagcgcagccactcg
gacatcgcggagctggccaagcacgaggccgagattgagcaccgcacagctgctctgaag
cgtgagggcttctggtccctgaagcggctgtcccgagtggcggagcccagccgacccaag
gtgcactgggactacctgtgtgaggagatgcagtggctgtcggctgacttcgcgcaggag
cgccgctggaagaggggcgttgctaggaaggtggtgcggatggtgatgcgtcaccacgag
gagctgcgtcagaaggaggagcgtgctcgccgggaggagcaggccaagctgcggcgcatc
gcctcctccatcgccaaggaggtgcgggccttctggagcagcgtggagaaggttgtgcag
ttcaagcagcagtctcggctggaggagaagaggaagaaggccctggacctgcagctcgat
ttcatcgtgggccagacagagaagtactccgacctgctgagccagtctctgagtgaggcc
cctgcgggatccgtgctcctgccgcgccatggggccccggtgcggcccgctccggaggag
gatgatggagactttgagccccagtgtgaggaggaggacgatgaggagaccattgaggtg
gaggagcagcaggagggcaacgacgccgaggcacagcggcgggagatagagctcctgagg
caggagggggagctgcccctcgaccagctgctgcagactctacgcgcacagacggaggcc
caggactcttcagagggtgagggctcccacagcacctctcgtgccccagaggaggatgag
gatgatgagttcgctgccaacgaggacgaagcggaggatgaggaggacaccatagcagct
caggaagtagttgagggggatgctgatcattcacaggagctcagtgacctggccagagaa
ggtgaaatgagtatagaggagctgatggagcgctatagtggtgcctatgctgaagatttt
gaagtgccctcagcttcggagtcatcctccagctctgaggaggagcaagaggaagcagat
gaagagtccgtgaatactggggagcgagaggaggaagatcagagtgaggcagcggaggga
gaccagagtgaggaagaggagagtcactgttcagactcctctgcagccctggatagcgat
gacgggcgctcgagtcccgggggtgacgtgggggtggcgttcctgctaaagggggaccgc
agcccccccaccccgggagagaaggtccccattgctccccggcccaagaaggagatcagc
gacatcgccgccacagccgagagcctgcagccaaagggttacacgctggccaccacccag
gtgaagacgcctatcccattcctgctctatggcacgctgcgggagtaccagcacatcggg
ctggactggctggtcaccatgtacgagaagaaactcaacggcatcttggcggatgagatg
gggctgggcaagaccatccagaccatctcgctgctggcccacctggcctgcgagaaaggt
actgagagcctgggcatcactggacactccagtttgggagctgttgggattctgggaggt
gtgggaattctggaatgggagttgttaatttggggaattcagaggaggctgctgctgacg
ggcacgcccctgcagaacagcctgatggagctgtggtccctgatgcacttcctgatgccc
cacgtcttccagtcgcaccgcgagttccgcgagtggttctccaacccgctgactggcatg
atcgagggcagccaggagtacaacgaggggctggtcaagaggctgcacaaggtgctgcgg
cccttcctcctgcgccggatcaaggccgacgtggagaagcagatgcccaagaagtacgag
cacgtggtgcgctgccggctgtccaagcgccagcgcttcctgtacgatgacttcatggcg
caggcctccacccgggagacgttggccagcggtcacttcatgagcgtcatcaacatcctc
atgcagctgcggaaggtgtgcaaccaccccaacctgtttgacccgcggccgatccactcg
cccttcatcacaccccgcatcctgtacaccaccgcctcgctcgccctgcgcgggctggac
acgcacccctttcagcgctgtgacctctccatgtttgacctcattggcctggagggccgt
gtgacgcgctaccaggcggacgtcttcctgccgcggaggaaggtctcccgcctgctggtc
caggaggtgatggactctcccgacccgccaccgcggcccaaacccgttcgcatgaaggtc
aacaggatgttccagccgctgccgaaagcggacgggcgcactgtagtgctggtgaacagt
ccccgcccccccggcccggccccctctcctgccccctcgccctcccccctgctgcgcccc
ccggtggccccggagagcgctcccgttgccgccgccccccttccgcagcagcagcacccc
gcccctccagtgacggtgtgttcggtgccgccggctgctctggcccggcctccgctggtc
ccagctggccccagtgctgtctgcgttggcggaaccggggtgaggcccggcacccctttg
cctgtactggctgtgcggcctccgggatcccctggcaccctgctccggaccccgacggca
cccgcagcctctgcgccccctctgtcaggctacgcaacacccactggtgggaccgtcacc
cagcgagtgctcctcaccccggacatgcaggccagactgccctccggtgaggtgctcagt
atagcccaacttgcctctttggccagtcgcccagtccagtcatctcagggcagcaagccg
gtcaccttccagctgcagggcaacaagttgactctgtcaggagcgcagctgcaccaggtc
aacatgagccagcctcggcccgtgcaggggaacgtagttcacctggtgtccagtgggggg
cagcaccacctgataagccagccggcccaggtggctgtgatccaaaccgtgagtcagagc
agcgcgggggtggtcagcacgcaccagcccaccctgccgcccggtccccccggcctgtcg
ctgccgctgaatgccacccaagttccttcctccatggtgtctggctctggcattgtgaag
atcgtggtgcgccagtcggctggtaaagagggggtgcccaccctggctgtgccccccacc
cccctgcggcccgtgctgagggtgctgcagggccctgccgccgggacagagcaggcgcgc
ctgagcgcgaccccgggccgggacgacagcgacgtcatcaccctgcgcgtggccacgccg
tcgggagcgagcccccacctgggcggcgggctgagcaccccgagagtgcgcacgcaggtg
cctccgcccccccgctcgcccttctacatgtcctggctggcggaccggcgcaaggcccag
cgtgaggcccgcctctcccggatcctgcgcgtgaacgagcagcactgctcggcccggcct
atctacggccaggaggtcctgcgcttcctgaccgtcctggaccggccctccgccccgtct
cccgacgccccggggcactggctgagctccggctacgcccactgcctgaacgcccagtcc
caggctccggaccggtactgggagcgcagcgaggccctgagccgggtcatccagacccca
gagcagcggatagagcagctgtccaacgtcatagacaggttcatcttcgtgatcccccca
gtcgaggccccggccgtggccctgcacacctctcaccccccgccctggctggcacaccgt
gaggccgtgttcagggagcggctgcgcgccgaactgtccccgcgcaccgcctgcctgcac
cgcgtccactgcaacatgcggacgcagttccccgacctgcggctcatccagtacgactgc
gggaagctgcagactctgcacatgctgctacgccggctgaaggcggggggtcaccgcgtc
ctgatcttcacccagatgacccgcatgctggacgtactggagcagttcctcaactaccac
ggacacatctacctgcgcctggacggcagcacccgcgtggagcagagacaggccttaatg
gagcgcttcaatgcagaccggcggatattctgcttcatcctgtcgacccgcagtgggggc
gtgggggtcaacctgaccggggccgacaccgtggtcttctacgacagcgactggaacccc
accatggacgcccaggcacaggaccgctgccaccggattggccagaccagggacgtgcac
atctacagactgatcagcgagagaacggtggaggagaacatcttgaagaaggccaatcag
aagaggatgctgggagatatggccatcgagggtggaaacttcactacagccttcttcaaa
cagcaaacaattcgggagctctttgatcttaccgagggggagaggaaggagatggaacag
cccaaccaggccccctcccgacaagaggaggaagaggccttgaacaacaaacacacctct
atcctggagcaggcgctgtgccgggcggaggacgaggaggacatcgccgccgcctcgcag
gcgaaggcggagcaggtggcggagctggccgagttcaacgagaacatcccgttggaggag
ggcagcgagggggcgggccgagagcaggaagaggaggagctatccaaggctgagcaggag
atcgccgccctggtggagcagctgactccaatagagcgctatgcaatgaacttcctggag
gcctcactggaagacgtctgcaaggaggagctgaaacaggccgaggagcaggtggaagcc
gcccgcaagggcctggaccaggccaaggaggaggcgttcaagctgccctcggacgacgag
gccccgtctgcgccccgcgccctgcccgaggacgccccgcaccgccgggcccgcaagacc
aaggagaagagcgccctctgcacccgggccagcgggaggctgaggcctcgaacccctgcg
gcggagggggcagacgaacttccccccgcccccgcccggagtccgggggaggtgacggga
gactcccctccacagcctcggatcgacgtccttcctaccaccctggctcgaccggagcct
gaggcaggggcccggaccgaggacaacatgccagtgcaggaggcgagcactgcatgtgtt
tccgctccggctccgtctctggctccgaccctggcttcggcttcggctaatccgaatccg
actccggctccggctccggcacctgctccggctcagaccctggcttcggcttcggctaat
ccgaatccgactccgactccggctccggctccagttcaggctccgctggttcccgccccc
gaggaggacagcaccccgcagcacagagacgtgcctgagcctgccggcctggctctgcag
ggagacaccaaagacgagctccacctcccttcgccaccgccactcacccgcctcgccacc
cccgaagcccatcagctgcccgagccagccgagccggcgccgccttctccccagaacaac
cttttgcccgacgcaggcgttgggcagccagagggaggaggaggaggcctcccttccccg
ggcccttcctccccaccccagccagccgcctgccaggcccccagggacccccagccccag
gtctcccccctctcagtgccttctgccgcccccacgtctccctgtggcgagaccgagagg
acggccccactctcccctccggccacccccgtaccctcctccgagcccccgcctccttcg
caaagggggggcggcccccacagcccccctgccccactccatgaagagccagagcctcat
gccgccccgcagcccagagcagacagggcgctggagcagcccgtctccactagggaaggg
gggtcagcccccggctcgcctgtgaagagcgagcggcttgattcctgtgggacggctgcc
gccatgttgcccggatcccttgtctacagcaatgcggacgaggcagggcaaagcagcagc
cctggacatcgcgctgcagaactgggcaccccacctccccagcccccgcccgcctccccc
ttgccctcccccggctcctcgcccccgggctcgccgccgctgccacaggcgccggcccgc
tctccccgcaagcgggtgtcggcggacggagaggtgctgaacagcctgcaggaggggtcg
ccctcggccaaggtgctgcgcaagctcccgggccggctggtgaccgtggtggaggagaag
gagctcaagcgccgcaggaggggagcgagcggcccgcggagggacgccgccggggaggcc
gaccgaggggcggacccggccgcggaggacggagccatgcggggccggccccgcaaagac
cagcgcccgcccgagatggccgcggactgccccgccagcccctcggcgtcgaggtccccc
gctgccgcccccacctctcccctcctccgcagctccccgcccgatccctcctgcctgcca
gtgcctgccgagaccctgccgcccagcccccacaggcaggaggcgcagctggagggggag
gacaaagaggcagcactgaagcagagtcccacagagtcccgggtaggagaagaggggggg
aatggcaagatggcgccgcctgaggagagcaagagcaagggctcggagaacaggaggcca
gggaagaggagggacagcgagagccgggactcggaggacaggaggccagggaagaggaga
gacagcgagagcggggccgaggcagacgaggagttgccgccccaccgcaagaagaggaga
gtgacccgctcctctcaggaagagcactccccctctccctccctgcgcagagtgacccga
gccgccgtcaggggccgcagtccccggccagaggagcagcggaggcgcagccgggccagg
caggggggcaagaggggcaagaggggcagacgcgcggcacaggaggaggagacggagccg
ccgcagcaccggcgcagcagtcagagccaggagtcgacgcgctcttcctccgcgtcgtcg
tcctcctcctcctcctgctcggcctccaccagatcgtcctcgctgtccaccggcaagaag
ggcggccgagggaaggcagcggtcaagagaaaaggagaggaggtggagacggaagaggag
gaggacgctccccagaggagggtcacccgctcctcccggacagacgccctggccgccacc
gccacctcgcagtcctcctccccctcgtcctccgattcggaggcgtccggcggggcgggc
gagcggcgcctgacacgggcgtcccagcgcaggccggagggcaggcggcgggaggcggag
cgccagggcgagggcggggacaggaggagagcgccgaagaacctgaagaggagagagcgt
ccgcgggaggcgggctcgtccggcagaactgtgggagggactgggggggagaggggagtt
ggtgccaaacctgctggggtgccgctggatgaactggggtacaagatgccccgtagtttg
agaagaaggcacacgctgcagggcgcaggggagccagaagggggaccccccgagtctgaa
gtggaggcagccatgagcatgtccgggagagctggggagaggcgttag
DBGET
integrated database retrieval system
