Lepisosteus oculatus (spotted gar): 102689429
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Entry
102689429 CDS
T07349
Symbol
wdr18
Name
(RefSeq) WD repeat-containing protein 18
KO
K14829
pre-rRNA-processing protein IPI3
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
loc03009
]
102689429 (wdr18)
Ribosome biogenesis [BR:
loc03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
102689429 (wdr18)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_alt
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
NBCH_WD40
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_VPS8
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_DCAF12
Ge1_WD40
Beta-prop_Nup120_160
Beta-prop_IFT140_1st
Beta-prop_DCAF4
bZIP_1
Motif
Other DBs
NCBI-GeneID:
102689429
NCBI-ProteinID:
XP_006639861
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Position
LG19:complement(3474494..3530734)
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AA seq
434 aa
AA seq
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MAAPMEVVVCADSSGQLWNCAVYELHSWTNLLTYRGGNTSPRTLAVLNGEYILGAQLGKN
YISVWEVQRKDQLQQKIVCPGVVTCLTASPNGLYLLAGIAEAIYLWEVRITCLVRVLPKV
TVHYRECRCSHFSNTSSDKLSGEQRHLSALWNLASVVQVDPLRTPEPRHVWAQHSLPITD
IHCGLMGPQARVATASLDQTVKLWEISSGEMLLSVLFDVGIMSVTFDPCEYSLFCGGSDG
SIFQVSLYSSNLSRDKAFQPDSEGNQVFKGHRNLVTCLSVSMDGTLLLSGSHDETVRLWD
IQSKQSLRTLNHKGPVTNAFIMPAPANMFLPDGRPSVPLPRFSRHLNTTEQGEGPEAGGV
SLRLGLHTQGSEESYLEKAEKLYSMMCAITDKRVFGDGENTKVRVAELEEEVKTLKKINK
DLYEFSSQLLTKPS
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccatggaagtagtggtttgtgccgactcgtctgggcagctgtggaactgc
gcggtttatgagctccactcctggaccaacctgctcacgtaccgaggcggcaacacttcg
cctcgaaccctagctgttctgaacggggagtacattctgggtgcccagctcggcaagaac
tacatcagtgtttgggaagtccagaggaaggaccagctgcagcaaaagattgtgtgccct
ggggtcgtgacatgcctgactgcgtcgcccaatggattgtacctgttggcagggattgct
gaggccatctacctgtgggaggtaagaattacttgccttgtaagagtgctgccaaaagtc
actgttcactatagggagtgcaggtgttcgcatttttcaaacacatcttctgacaaactt
tctggcgaacagcggcacctgtctgcgctgtggaacttagccagcgtggtgcaagtggat
ccactgcggaccccggaaccacgacacgtttgggcacagcactcccttcccatcacggac
atccactgcggcctgatgggaccccaggcacgagtggccacggcatccctggaccagact
gtgaagctctgggaaatctcctccggtgaaatgctgctatccgtcctgtttgatgtgggc
atcatgtctgtgacctttgacccctgcgagtattccctcttttgtggtggcagcgatgga
agcatcttccaggtgtcattgtacagctcgaatctcagtagagacaaggcttttcagcct
gactctgaggggaatcaagttttcaaaggacacaggaacctggtgacttgcctctcggtg
tctatggatggcacactgctgctttctggctcccatgacgagacggtgagactgtgggac
attcagagcaagcagagtctcagaaccctcaaccacaaagggccagtcaccaatgccttc
atcatgccagcccctgccaacatgttcctcccggacggccgccccagcgtcccactgcca
cgtttcagtaggcacctgaacaccacagagcagggagagggtcccgaggcagggggggtc
agcctgcgccttgggctccacacacagggctcagaagaatcctatctggagaaggctgaa
aagctatactccatgatgtgtgctatcacagacaagagggtgttcggcgatggcgagaat
accaaggtgcgtgtggccgagctggaggaggaggtcaagacgctgaagaaaatcaacaag
gacctatatgaattctcttcacagctgctgaccaagcccagctga
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integrated database retrieval system