KEGG   Lepisosteus oculatus (spotted gar): 102689429
Entry
102689429         CDS       T07349                                 
Symbol
wdr18
Name
(RefSeq) WD repeat-containing protein 18
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
loc  Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:loc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:loc03009]
    102689429 (wdr18)
Ribosome biogenesis [BR:loc03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    102689429 (wdr18)
SSDB
Motif
Pfam: WD40_alt WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C WD40_CDC20-Fz EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 NBCH_WD40 WDR55 WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_Vps41 WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th Beta-prop_SPT8 WD40_RFWD3 Beta-prop_VPS8 Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_DCAF12 Ge1_WD40 Beta-prop_Nup120_160 Beta-prop_IFT140_1st Beta-prop_DCAF4 bZIP_1
Other DBs
NCBI-GeneID: 102689429
NCBI-ProteinID: XP_006639861
LinkDB
Position
LG19:complement(3474494..3530734)
AA seq 434 aa
MAAPMEVVVCADSSGQLWNCAVYELHSWTNLLTYRGGNTSPRTLAVLNGEYILGAQLGKN
YISVWEVQRKDQLQQKIVCPGVVTCLTASPNGLYLLAGIAEAIYLWEVRITCLVRVLPKV
TVHYRECRCSHFSNTSSDKLSGEQRHLSALWNLASVVQVDPLRTPEPRHVWAQHSLPITD
IHCGLMGPQARVATASLDQTVKLWEISSGEMLLSVLFDVGIMSVTFDPCEYSLFCGGSDG
SIFQVSLYSSNLSRDKAFQPDSEGNQVFKGHRNLVTCLSVSMDGTLLLSGSHDETVRLWD
IQSKQSLRTLNHKGPVTNAFIMPAPANMFLPDGRPSVPLPRFSRHLNTTEQGEGPEAGGV
SLRLGLHTQGSEESYLEKAEKLYSMMCAITDKRVFGDGENTKVRVAELEEEVKTLKKINK
DLYEFSSQLLTKPS
NT seq 1305 nt   +upstreamnt  +downstreamnt
atggcggcgcccatggaagtagtggtttgtgccgactcgtctgggcagctgtggaactgc
gcggtttatgagctccactcctggaccaacctgctcacgtaccgaggcggcaacacttcg
cctcgaaccctagctgttctgaacggggagtacattctgggtgcccagctcggcaagaac
tacatcagtgtttgggaagtccagaggaaggaccagctgcagcaaaagattgtgtgccct
ggggtcgtgacatgcctgactgcgtcgcccaatggattgtacctgttggcagggattgct
gaggccatctacctgtgggaggtaagaattacttgccttgtaagagtgctgccaaaagtc
actgttcactatagggagtgcaggtgttcgcatttttcaaacacatcttctgacaaactt
tctggcgaacagcggcacctgtctgcgctgtggaacttagccagcgtggtgcaagtggat
ccactgcggaccccggaaccacgacacgtttgggcacagcactcccttcccatcacggac
atccactgcggcctgatgggaccccaggcacgagtggccacggcatccctggaccagact
gtgaagctctgggaaatctcctccggtgaaatgctgctatccgtcctgtttgatgtgggc
atcatgtctgtgacctttgacccctgcgagtattccctcttttgtggtggcagcgatgga
agcatcttccaggtgtcattgtacagctcgaatctcagtagagacaaggcttttcagcct
gactctgaggggaatcaagttttcaaaggacacaggaacctggtgacttgcctctcggtg
tctatggatggcacactgctgctttctggctcccatgacgagacggtgagactgtgggac
attcagagcaagcagagtctcagaaccctcaaccacaaagggccagtcaccaatgccttc
atcatgccagcccctgccaacatgttcctcccggacggccgccccagcgtcccactgcca
cgtttcagtaggcacctgaacaccacagagcagggagagggtcccgaggcagggggggtc
agcctgcgccttgggctccacacacagggctcagaagaatcctatctggagaaggctgaa
aagctatactccatgatgtgtgctatcacagacaagagggtgttcggcgatggcgagaat
accaaggtgcgtgtggccgagctggaggaggaggtcaagacgctgaagaaaatcaacaag
gacctatatgaattctcttcacagctgctgaccaagcccagctga

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