Lepisosteus oculatus (spotted gar): 102689538
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Entry
102689538 CDS
T07349
Symbol
rad21
Name
(RefSeq) double-strand-break repair protein rad21 homolog
KO
K06670
cohesin complex subunit SCC1
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
102689538 (rad21)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
loc03036
]
102689538 (rad21)
Chromosome and associated proteins [BR:
loc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
102689538 (rad21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
SMC_ScpA
ATHILA
Motif
Other DBs
NCBI-GeneID:
102689538
NCBI-ProteinID:
XP_015212484
Ensembl:
ENSLOCG00000003279
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All DBs
Position
LG11:5699929..5720654
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AA seq
643 aa
AA seq
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MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL
LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEENREAAYNAITLPEEFHDFDQP
LPDLDDIDVAQQFTLNQSRVEEITMREEVGNLSLLQENDFSDFGMDDREMMREESAFEVD
IISGATAPNLLLEPEPHASQLNDEKSNHLQYDDQYKDDSFGDNPMGNDGGMLVDKLLSNE
DGGGIFDDPPAMAESGVMMPQEHAHDDDDDFDNMSPGGPDSPDSVDPVEPLPTMTDQTEQ
ATLVHNEEEAFALEPIDITVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDL
APPTKKLMMWKETGGVEKLFSLPAQPLWNNRLLKMFTRCLTPLVPDELRKRRKGGEADSL
DEFLKDLENPEVPREEQQTQQRDIIDQTILEEPSVLQMSAMEGSRTTIDESVMPPPPQRG
IKRKSQEPEPALPMGALEQQPEQQAAVPPQMEIPPVELPPSEPQSITQLIPELDLLGEKT
KEKEKDDEEEEEEEEGQGGDQDQEERRWNKRTQQMLHGLQRALAKTGAESISLLELCRNN
NKKQAAAKFYSFLVLKKQQAIELTQQEPYSDIIATPGPRFHII
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgttttatgcccactttgtcctcagcaagagggggccgttggccaaaatctggcttgcg
gcccactgggataagaagcttaccaaagcacacgtgttcgagtgcaatctggagagcagt
gtggaaagcatcatctctccaaaggtgaaaatggcgttgagaacttctggccatctcctc
ttgggcgttgtaagaatctaccacaggaaagccaaatacctccttgctgattgtaatgag
gcgttcattaagatcaaaatggcttttcgtccaggggttgtggatctgccggaggagaac
agagaggccgcctacaatgccatcacactgcctgaagagttccatgattttgaccagccg
ctacccgacctagatgacattgatgtagcgcagcagttcacattgaaccagagcagggtg
gaagaaatcaccatgagagaagaagtgggaaatctcagccttctacaagaaaatgatttt
tctgactttggcatggacgacagggagatgatgcgcgaagagagcgcgtttgaggtggac
attatcagtggcgccacggcccctaacctgctgctggagcctgagccacacgccagccag
ctgaacgatgagaagtccaaccaccttcagtacgatgaccagtacaaagacgacagcttt
ggggataaccccatgggcaatgatggtggaatgctggtggacaagctcctcagtaatgaa
gatgggggcggtatcttcgatgacccgccagcgatggctgaaagcggcgtgatgatgcct
caagagcatgcccatgacgacgatgacgacttcgataacatgtcccctggtgggccagat
agtccagactctgtggatccggtggagcccctgccaactatgactgaccagactgagcag
gcaactctggttcacaacgaggaagaagcttttgccctggagcccatagatatcactgtt
aaggagaccaaagctaagcggaagaggaagctgattgtggacagcgtgaaggagctggac
agcaagacaatccgtgctcagctgagtgactactctgacatcgtcaccactctggatctg
gctcctcctactaaaaagctcatgatgtggaaggaaaccggcggtgtggaaaaactgttc
tccctgccagcacagcctctgtggaacaacagactactcaagatgtttacccgttgcctt
actccactggtcccagacgagctgaggaagaggaggaagggtggggaggctgacagtctg
gatgagttcctgaaggacttggagaaccccgaggtgcccagagaggagcagcagacccag
cagcgagacatcattgatcagaccatcttggaggagcccagtgtcctgcagatgtctgcg
atggagggcagcaggaccacgatcgatgagtccgttatgccaccccctccccagagagga
atcaagcgcaagtcccaagagccagagccagctcttcctatgggtgctctcgagcagcag
ccggagcagcaggcggccgtcccgccccagatggagatcccgcccgtggagctccccccc
agcgagccgcagagcatcacgcagctcatccccgagctcgacctcctgggagagaagacc
aaggagaaggagaaggacgacgaggaggaagaggaggaggaagaaggccagggaggagac
caggatcaggaggaaagaaggtggaacaagaggactcagcagatgcttcatgggctccag
agagccttggcaaaaacgggggctgaatccatcagcctgctcgagctgtgtcgaaacaac
aacaagaaacaagcggcagcaaaattctacagcttcttggtacttaaaaagcagcaagcc
attgagctcacacaacaagaaccttacagtgatatcatcgccacacctggacctagattc
catattatataa
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