Lepisosteus oculatus (spotted gar): 102689703
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Entry
102689703 CDS
T07349
Symbol
exosc10
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102689703 (exosc10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loc03019
]
102689703 (exosc10)
Messenger RNA biogenesis [BR:
loc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
102689703 (exosc10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
CX9C
Motif
Other DBs
NCBI-GeneID:
102689703
NCBI-ProteinID:
XP_015192526
Ensembl:
ENSLOCG00000006443
LinkDB
All DBs
Position
LG25:11697207..11711079
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AA seq
895 aa
AA seq
DB search
MAASTSRSGRGKGNNISPTNEEAEGEKPELLPGFKDADSFVKHGLGTVVAATKASANLPQ
AGDEFDFYRSFPGFQEFCETQGERLLQCMSQLMQYHSCKSHMRDRNKVTGLEERFDLLVD
SNDVILERVGILLDEASGVNRNQQPILPAGIQPPKTIVSSWNRKSRDSSKAAKSETFRLL
HAKNIQRPQLKFREKVDNSNTPFVPKIFVKPNALKSLPTYFTDQKIRKERPEDLDVPPAL
ADFIHQQRTQQHLDDMFAHPYQYELDHFTVPENLLSKPEPQMYKPLAETNCQFINSMEDL
VELNEKLAKCSEFAVDLEHHSYRSFLGLTCLMQISTRDEDFIIDTLELRSEMYILNETFT
DPSIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARVLNLGRHSLDHLLKLYCGVDSDK
QYQLADWRIRPLPEEMFQYARADTHYLLYVYDRLCKELYECGNEQPALLQMVWQKSRDVA
LKKYTKPIFTEESYLELYRKQKRMFNVQQLAALRLLFAWRDKLARQEDESTGYVLPNHML
IKISEELPREPQGIIACCNPVPPLVRQQVNELHLLVQQARETPLLKTEPVTSEKKKGFTL
KRKSKNVLFGPHDDSHVSEDDFPDFTSHGAPVKQGALFSEETGASDDWSSLLASAKITIF
EHSGTDTEKSGYLTVAQQKAHSILASFENPFRMYLPSKDNNIHLSENAKYDPSSKVYEIS
NRWKLLSQEQQKKDAEAKEEARKKAREAAQKAAEERKKAQKNYKESLQNVVTVRQQAVMA
AAEQEGKKRQPNPSESGAEIPKPERKRPKATEQPAQQGAPVPADFKPFDYSKSDFKVFAG
GKSKESTQFDPNKQAQEPKRKKNPKGHRMNSAGNKSMSYLAGKSERGFRHNWPKR
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgtccacgagcaggagtggcagaggcaagggaaataatatttctccgacaaac
gaagaggcagagggcgaaaaaccagaacttttgcccggctttaaggatgccgattcattt
gtgaagcacggcttgggaactgtagtagcggccacgaaagcttctgcaaatctgccgcag
gctggggacgaattcgacttctaccggagctttcccggattccaggagttctgcgaaacg
cagggagaaagacttttgcaatgtatgagtcaactgatgcagtaccatagctgcaaatct
cacatgagagatcgcaacaaagtgactggcctggaggagagattcgacttgctggttgac
tccaatgatgtcatactggagagagtgggaatactactggatgaggcttcaggagtgaac
aggaaccagcagcccatcttaccagctggtattcagcctccaaagaccatcgtatctagc
tggaaccgcaagagcagggattccagcaaggcggccaagtctgagacatttcgccttctg
cacgcaaaaaacattcagcgtcctcagctgaagtttcgggagaaggtcgacaattctaac
acacccttcgtccccaagatcttcgtcaaacccaacgcgctgaaatcccttccaacgtat
tttacagaccaaaaaatccgcaaggagaggcctgaagatctggatgtgcctccagcactg
gcagattttatccaccagcagagaacacagcagcatctagatgacatgtttgctcaccca
tatcagtatgagctggaccattttactgtgccagagaatttgctttccaagccagaaccc
caaatgtataaaccgctcgcagaaacaaattgccaatttatcaactcgatggaggacctg
gttgaactgaatgaaaaactggccaagtgctctgagtttgcagtggatctggagcaccat
tcctacaggagtttcctgggattgacctgtctgatgcagatctcgaccagagacgaagat
ttcattattgatacattggagttgcgcagtgagatgtacatcctcaatgagaccttcaca
gatccctccatcgttaaggtttttcatggcgctgactcggatattgagtggctacagaag
gattttgggctgtatgttgtgaacatgtttgacactcaccaggctgcgcgtgtgctcaac
ctaggcaggcattccctggaccacctgttaaagctgtactgtggcgtcgattctgacaaa
cagtaccagctggcagactggcgaataagaccgctgccggaagagatgttccagtacgcc
cgtgcagacacccattacctgctgtatgtgtatgaccgcctgtgcaaggagctgtatgag
tgtggcaacgagcagccggccctcttgcagatggtctggcagaagagcagggacgttgca
ctcaagaaatacaccaagcccatcttcacggaggagtcgtatctggagctgtacaggaag
cagaagcggatgttcaatgtgcagcagctggcagccttgcgcctcttgttcgcctggagg
gacaagctggcccgacaagaagacgagagcacggggtatgtcttgcctaaccacatgctg
attaaaatttcagaagagctgccaagagaaccccagggcatcattgcctgctgcaacccg
gtgccgcctctggttcgccagcaggtgaatgagctgcacctcctggtgcagcaggcccgg
gagacgcccctgctcaagacagaacctgtgacttcagaaaagaaaaaaggatttactctc
aaaagaaagtccaagaacgtgttgtttggccctcatgacgattctcatgtctctgaggat
gacttcccagatttcacctcccatggagctccagtgaagcaaggggcgctgttctctgag
gagacgggagcttctgacgattggagctctctgcttgcttccgccaagatcaccatcttt
gaacactctggcacagacacggagaagagtggttatctcaccgtcgctcagcagaaggct
cacagtatactggcgtcgtttgaaaatcccttcagaatgtacttgccttctaaggataat
aacatccacctctcggaaaacgccaagtacgacccttcatcaaaagtgtacgagatcagt
aacaggtggaagctcttaagccaggagcagcagaagaaggatgcagaggcaaaagaagag
gcaaggaagaaggcccgagaagcagcccagaaagctgcagaagagaggaagaaagcacag
aaaaattacaaagaatctcttcaaaatgttgtgactgttcgtcagcaagcggtgatggca
gcggctgagcaggaagggaagaaacgtcagccgaatcccagcgagtccggtgcggagatt
cccaaacccgagaggaagcggcccaaagccactgagcagccagcgcagcagggcgctcct
gtaccggccgacttcaagcccttcgactacagcaagtcggatttcaaagtctttgccgga
ggtaaatccaaggaaagcacacagtttgatccgaacaagcaagctcaggagcccaaacga
aagaaaaaccccaaagggcacaggatgaattctgcagggaacaaaagcatgtcttacctg
gcgggcaagtcggagagaggatttaggcacaattggcctaagagataa
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