Lepisosteus oculatus (spotted gar): 102689716
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Entry
102689716 CDS
T07349
Symbol
tpm1
Name
(RefSeq) tropomyosin alpha-1 chain isoform X2
KO
K10373
tropomyosin 1
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04260
Cardiac muscle contraction
loc04261
Adrenergic signaling in cardiomyocytes
loc04814
Motor proteins
loc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
102689716 (tpm1)
04820 Cytoskeleton in muscle cells
102689716 (tpm1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
102689716 (tpm1)
04261 Adrenergic signaling in cardiomyocytes
102689716 (tpm1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
loc04812
]
102689716 (tpm1)
04147 Exosome [BR:
loc04147
]
102689716 (tpm1)
Cytoskeleton proteins [BR:
loc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
102689716 (tpm1)
Exosome [BR:
loc04147
]
Exosomal proteins
Exosomal proteins of microglial cells
102689716 (tpm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
CLZ
Laminin_II
Crescentin
DUF745
TMF_DNA_bd
Lebercilin
ATG16
DUF3450
CENP-F_leu_zip
SlyX
PUMA_CC
Laminin_I
DUF1664
DUF7518
DUF16
XhlA
Motif
Other DBs
NCBI-GeneID:
102689716
NCBI-ProteinID:
XP_006628963
Ensembl:
ENSLOCG00000014736
LinkDB
All DBs
Position
LG3:complement(52778429..52796801)
Genome browser
AA seq
284 aa
AA seq
DB search
MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVALQKKLKATEDELDKY
SEALKDAQEKLELAEKKAADAEGDVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTE
ERAELSESKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERTVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSM
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggatgccattaagaagaagatgcagatgcttaagctcgacaaggagaacgccttggac
agagctgagcaggcagaagcagacaagaaggcagccgaggacaggagcaaacagctcgag
gacgagctggtagctctgcagaagaagctgaaggcaactgaggatgaactggacaagtac
tccgaggcccttaaagatgctcaggagaaactggaactggctgagaagaaagccgccgac
gctgagggtgacgtcgcctccctgaacagacgcatccagctggtggaggaggagttggat
cgcgcccaggagcgcctggcgaccgcgctgcagaagctggaggaggctgagaaggcagct
gacgaaagcgagagaggaatgaaggtcattgagaacagggctctgaaggatgaggagaag
atggaactgcaggagatccagctgaaggaggccaagcacattgcagaggaggctgaccgc
aaatatgaagaggttgcacgtaaactggtgatcattgagggtgatctggagcgtactgag
gagcgtgccgagctgtcagaaagcaaatgtgctgagcttgaggaagagttgaaaactgtg
accaacaacctgaagtcactggaggcacaggctgagaagtactcacagaaggaagacaag
tatgaagaggagatcaaggtcctcaccgataaactgaaggaggctgaaactcgtgctgag
ttcgctgagagaacagtagccaagcttgagaagaccattgatgacctggaggatgagttg
tatgcccagaaactgaagtacaaagccatcagcgaggagctggaccacgctctcaacgac
atgacttcaatgtaa
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