Lepisosteus oculatus (spotted gar): 102689879
Help
Entry
102689879 CDS
T07349
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03013
Nucleocytoplasmic transport
loc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102689879 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102689879 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loc03019
]
102689879 (nup153)
Messenger RNA biogenesis [BR:
loc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102689879 (nup153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
102689879
NCBI-ProteinID:
XP_015213180
Ensembl:
ENSLOCG00000008267
LinkDB
All DBs
Position
LG11:25553082..25578694
Genome browser
AA seq
1454 aa
AA seq
DB search
MAAAGGGKIRTRRYHIASKPYAKGKQQQGIISRVTDTVKSIVPGWLQKYFKNGEPRDTET
EEVREGADEQETHRSSRDPSDEEDVVHLPDRTSTQEPTTSNAEPSTSRSALNFQDVLARP
PLNRSHLNLSTLDSPALHSQPSTSTAFPISSSGFSLVKEIKDSTSQHEDDNISTTSGFSS
RASDKDVTTSKSTCLPPLWSPEAERFVPHQAGAGLKKPAFNLSVFGNSSSTLANNSVLNS
TQLGDSPFYPGKTTYGGAAAVRTSSRIRGTPYQAPVRRQVKAKPISSSSCGVTSATARRI
LQSLERMSSPLADAKRIPSSLPSPLSTSLDRSDLDVTNFQPKRKKVDSAHPPVQKLVTPT
VASVALNKSISFKPSLTPSGSLSSSRKWKENRDRAGRQSNKDAEITVEPPQSTNRFSYPL
FSTPAANGTGSSRAGGKMKRERAFQNSSKHTRENETIEVPDLPNTSLPISTSALPTFSFV
CPPSTAASVPATSKVPSATSSPSCAAFTFSSPIVKATEPNLLPPSPSAGFTFSAPVAKTA
PSNSTGKTYPSSVTPVKNSLASSSTSGSAQNNEVFEGPFKPAKTLKEGSVLDILKGSGFS
SPLTSRNTPIPVKPFQTNTSGNSPASGIALGDKFKPAAGSWQCNTCLLQNGPSDGKCVAC
LSAKPGTDSFKQGPGLGSGSKPSITEPLPSFVDKFRPAAGSWECDTCLVQNKSDVIKCVA
CETPKPGTGVKPALTMPAVSEPKSTATSSGSSTSSTVAGGTAVSTVSSGVGFGGLFKKKE
GAWQCEVCLVENKAEDSKCVACQSTKAGAAPADTTTGPVPLGGSLQGFGDKFKKPEGSWD
CDVCCVQNKAEATQCVACQSARPGAKVEPKGFTSLSSNTAASPFTFGIQSSSATESPATT
NTGGFTFGDQGGIKFGSTTTDSSASSNNVSSGAFGVSFKFGTSSSASTETDDSKKGDAQA
FGSGFKFGITSGITFGTGNSACNHTENKSESTSKPSLEGFSFGLSTPAKAEEKPTEGGLT
FAASKEKSEQAGSVPPAAAVFSFGKTEEKKAVVEQTPALSFNFGKPVEKELVVPVSSTPA
PAPAPAAPVFAFGKLEEKQDTGNSSSGFLFNSGKEAEKSAPQLGFSFGKTAPPKEETKSA
FSFAKPAENQDAAEPPKPAFAFGAAAAEQGAPKPAFSFLAGGSSSTAPVAPTTAASLFGN
ASSSATSNPAPAFVFGQGSSSEGTPAKTFMFGSQETKPPAAPGAGTTVQPFMFGSSNATP
PFNFVATAPSTASSTGSSAPPFVFGSASSSSSTSAPAFGVNQAPAFGQGSSQPSAPAFGS
AAASLFSAGSQPASFGSPANSQAPVFGQQNNQQPAFGSTAAPANPGGGFQFGATSAFGAP
TSGGVFTFGGPGASSGPSTAPAVPTQPSAPTAGFSFSQPPAFNIGSAKSSFNTPTPGQHS
IAGRKIKTAVRRRK
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcaggaggagggaaaatcagaactaggaggtaccacatcgcttcgaaacct
tacgccaaaggcaaacagcagcaaggtattataagcagagtgactgacactgtgaagagc
atcgtcccaggctggctgcagaagtacttcaagaatggtgagccgagggacacggagacg
gaggaggtcagggaaggggcagatgagcaggagactcacaggagcagccgagatcccagc
gatgaggaggacgtagtccaccttccagacaggacaagcacccaggagcccactaccagt
aatgcagagccctccaccagtcggtcagccttgaacttccaggacgttcttgccaggcca
cccctgaaccgcagtcacctgaacctttccacactggactcgcctgcgctgcacagccag
ccctccacatccacagcttttcccatcagctcctcgggcttttccttggtcaaggagata
aaggactctacctctcagcatgaagacgacaacatctccaccaccagtggcttctcttca
agggcctctgacaaagatgtgaccacttcaaagagcacctgtttgccccctctgtggtcc
ccagaggctgagcgctttgttccccatcaagcaggagctggtctgaagaagccagccttc
aacctgtctgtgtttggaaactcttccagtacccttgcaaacaattcagtactcaactct
actcagcttggtgactctcccttctatcctggaaagaccacatatggaggggcagcggca
gtgaggacaagttccaggatacgtggcacgccataccaggctcctgtaagaagacaagtt
aaagcaaagccaattagttcttcatcttgtggagtaacgagcgccactgctcgaaggatt
ctgcagtctttggagcggatgtcaagtcctttggcagatgctaaaagaatcccatcatct
ctaccctcacctttgtccacatcgctggataggagtgatctcgatgttacaaatttccag
ccgaaaagaaaaaaggttgattctgcccaccctcctgttcagaagctcgtgaccccaaca
gttgcctcagtagctctgaacaaatccatttctttcaagccctctttgactccctctggt
agcctgagcagttcgcgtaaatggaaggaaaaccgtgaccgggctggaagacaatcaaac
aaagatgctgaaataacagtagaaccccctcagagcacaaacagattttcataccccctg
ttcagcactcctgcagccaatggcacaggttctagcagggcaggtggtaaaatgaagagg
gagagagcttttcaaaactcttccaagcatactcgggaaaatgagactatagaggtgcct
gatctgccaaacacctcgttgcccatcagtacatcagcgcttcccacttttagctttgtc
tgtcctccatctactgctgcaagtgtgcctgctactagcaaggtaccttctgccacatct
agtccaagctgtgctgctttcaccttttcctctcccattgtcaaagcaacagagccaaac
cttctacctccttcaccatctgctggatttacatttagtgctcctgtcgctaaaactgct
ccttccaactccactggcaagacctacccctcatcagtgacaccagttaaaaattcttta
gcgtcatcttcaacttctggctctgcacagaacaatgaggtgtttgagggtccttttaag
ccagccaaaactttaaaggaaggcagtgtattagacatcctcaagggatcaggtttttct
tctcctctgacatccagaaacacccctatcccggtcaagcctttccaaacaaacaccagt
ggaaactctcctgcttcaggcattgcgcttggggacaagtttaaaccagcagctggctcc
tggcagtgcaacacctgtcttttgcagaacggtccttctgatggcaaatgcgtggcttgc
ctatctgctaaaccaggcacagactctttcaaacagggtcccggtctcggcagtggcagt
aaaccttccataacggagcccttgcctagttttgtggacaaattcagacctgcagctgga
agttgggagtgcgacacttgtttagtacagaacaagtctgatgtcattaaatgtgtggca
tgtgagacacccaagcctggcactggagtgaagcctgccttgaccatgcctgctgtttca
gaacccaagtcaacagcaacttcctctggctcctcaactagtagcactgttgctggcggc
acagcagtgtctacggtgtcttcaggggtggggtttgggggactgttcaagaagaaggag
ggtgcctggcagtgtgaagtgtgccttgtggagaataaggcagaagacagcaagtgtgtc
gcctgtcaaagtacaaaagcaggtgcagctccagctgacacaacaactggccctgttccc
ttgggggggtcgctgcagggatttggtgacaaattcaagaagccggaagggagctgggac
tgtgatgtgtgctgcgtgcagaataaagctgaggccactcagtgtgtggcctgtcagagt
gccaggccaggagccaaggtggagcccaaaggttttacatctttgtcatcaaatactgca
gcatctcccttcacttttggaatccagtcatcctctgccacagaatctcctgcaactaca
aacacagggggctttacatttggagaccagggtggtataaaatttggctccaccacaaca
gactccagtgcatcatctaataatgtgtcatctggtgcgtttggagtaagctttaagttt
ggaacgagctcttctgcatccacagagacagatgacagcaaaaagggtgatgctcaggcc
tttggcagcggttttaaattcggcatcacaagtggcattacatttggcactggaaatagt
gcctgcaaccacaccgaaaacaaatcggaatcgacgagcaaaccctctctggaaggcttc
tcgttcggactttccactccagccaaagctgaagaaaagcccactgagggaggcttgaca
tttgcagcctcgaaggagaagtcagagcaggcgggatccgttcccccagcagccgccgtt
ttctcctttgggaaaacggaggagaagaaagctgtggtagaacagacaccggcactaagt
tttaactttgggaagcctgtcgagaaggaactggtggttccggtatcttctaccccagct
ccagcacctgctcccgctgctccagtttttgcatttgggaagctggaagaaaaacaggac
actgggaacagctcttctgggttccttttcaactcgggaaaggaggctgagaagtccgcc
ccgcagctcggcttctcgtttggcaagaccgctccacccaaggaggagaccaagagtgcg
ttctcattcgcaaagcccgctgagaatcaagacgcagccgagccacccaaaccagcattt
gcttttggagctgcagctgccgaacaaggggctcctaagcctgctttcagtttcctagcg
ggtggatcgtcctccacagctcctgttgcccccaccacagccgccagcctctttgggaac
gccagcagttccgccacatccaatcctgccccagcctttgtctttgggcaaggcagttcc
tcggagggcacccctgccaagacattcatgtttggatcgcaggagaccaaaccccctgca
gctcctggtgctgggacaacagtccagcccttcatgtttggttcgagtaacgcaaccccc
ccattcaactttgtggctacggccccttccacagccagctcgacaggctcctctgctcct
ccatttgtatttggctctgcctcttcatcctcgtcaaccagcgcccctgcttttggtgtg
aaccaagcgcctgcttttggtcagggttccagccagcctagtgctcctgcgtttggttca
gcagcagcttctctcttctcagctggttctcagccagcttcctttgggtccccggccaac
agtcaggctccagtgtttgggcagcagaacaatcaacagcctgcctttggctccacagca
gcacctgccaatccaggtggtgggttccagtttggggccactagtgcttttggggcccca
accagtggtggggtgtttacgtttggagggccaggtgcatcttcaggcccttcaacagcc
ccagctgtcccgacacaaccctcagcgcccactgcaggcttcagcttctcccagccccca
gccttcaacattggatctgctaagagttcattcaacacacctacccctggacagcattca
attgctggacggaagattaagactgctgttagacgccggaagtaa
DBGET
integrated database retrieval system
