Lepisosteus oculatus (spotted gar): 102689959 Help Entry 102689959         CDS       T07349                                  Name (RefSeq) thrombospondin-3-like   KO K04659   thrombospondin 2/3/4/5 Organism loc  Lepisosteus oculatus (spotted gar) Pathway loc04145   Phagosome loc04510   Focal adhesion loc04512   ECM-receptor interaction loc04518   Integrin signaling loc04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:loc00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     102689959    04518 Integrin signaling     102689959  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     102689959   09144 Cellular community - eukaryotes    04510 Focal adhesion     102689959   09142 Cell motility    04820 Cytoskeleton in muscle cells     102689959  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:loc04131]     102689959   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:loc04147]     102689959    00536 Glycosaminoglycan binding proteins [BR:loc00536]     102689959 Membrane trafficking [BR:loc04131]  Endocytosis   Phagocytosis    Opsonins     102689959 Exosome [BR:loc04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    102689959   Exosomal proteins of colorectal cancer cells    102689959   Exosomal proteins of bladder cancer cells    102689959 Glycosaminoglycan binding proteins [BR:loc00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    102689959 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 COMP EGF_CA EGF_3 EGF_MSP1_1 EGF EGF_LMN_ATRN Motif Other DBs NCBI-GeneID:  102689959 NCBI-ProteinID:  XP_006641876 Ensembl:  ENSLOCG00000008271 LinkDB All DBs Position LG24:complement(7417799..7444582) Genome browser AA seq 857 aa AA seqDB search MGASHWLPALLSVSVLVTAGVCDSDTQEMQVIDLLALQDARQSAAAVEKVAAAMGTVSDI YIVSAFRLPPKLGGVLLGLYNKQDNTKYLELAIMGKINKALVRYIREDGKLHTVNLQNAN LVDGRTHSLILRVGGLRRDNLALEMYVDCRLADSSQGLPGLVKLPAEADSVEIRTGFKAY ARLQGSVESLKLALGGTVAKVGVLTDCPFQGDSSLYNTVNGALNTILGDHTKALIGQLVL FNQILGELREDIREQVKEMALIRNTILECQVCGFHEPRSRCSPNPCFKGVSCMETYEYPG YRCGPCPEGTAGNGTHCQDIDECSLAQPCFSPSGCVNTASGFRCDPCPPGYYGPPLSGVG VEFAKSHKQECADIDECGEGSNACVPNSVCANTVGSFRCGQCKLGFVGNQTAGCFPRKSC STLTFNPCDVNAHCLMERNGEVSCACNVGWAGNGHTCGPDTDIDGYPDQSLPCIDNDKHC KQDNCVFTPNSGQEDADNDGIGDQCDEDADGDGIKNVEDNCRLVPNKDQQNSDTDSFGDA CDNCPNVPNINQQDTDSNGEGDACDNDIDGDGIPNVLDNCPKVPNPLQTDRDGDGVGDAC DSCPEISNPTQTDIDNDLVGDVCDTNQDLSLKESKRGGLPVVTHFLCVCSQGMEIVQTMN SDPGLAVGYTAFNGVDFEGTFHINTVTDDDYAGFIFGYQDSSSFYVVMWKQTEQAYWQSV PFRAVAAPGLQLKAVKSRTGPGEFLRNALWNTGDTPGEVTLLWKDPRNVGWRDKTSYRWH LTHRPQVGYIRVKLYEGPGLVADSGVIIDTSMRGGRLGVFCFSQENVIWSNLRYRCNDTV PEDFEPFRKQLQHNYKL NT seq 2574 nt NT seq  +upstreamnt  +downstreamnt atgggtgcgagccactggttgcccgctctgctttcagtctctgtgttggtgactgccggc gtctgtgactcggacacgcaggaaatgcaagtgattgacctgctggctctgcaggacgcc aggcagagcgcggccgccgtggagaaggtcgccgcggcgatggggacggtgagcgacatc tacatcgtctccgccttccgcctgccgcccaagctgggaggggtgctgctggggctgtac aacaaacaggacaacaccaagtacctggagctggccatcatgggcaagatcaacaaagct ctggtgcgctacatccgggaggacggcaagctccacacggtcaacctgcagaacgccaac ctggtcgacgggcgcacccactcgctcatcctgcgcgtgggggggctgcggcgcgacaac ctggccttggagatgtacgtggactgccggctggccgactccagccagggcctgcccgga ctggtcaagctgccggccgaggcagactcggtggagatccgcaccgggttcaaggcctac gccaggctgcagggttcagtggagtctctgaagttggccttggggggcacagtggccaag gttggggtcctgactgactgtccgttccaaggagattcctcactgtacaatacagtgaac ggtgctctgaacacgatcctgggtgaccacacgaaggctctgattggtcagctcgtcctc ttcaaccagatcctgggagaactgagagaggacatccgagagcaggtgaaggagatggcc ttgatcagaaacactatcctggagtgccaagtgtgtggtttccacgagccgcggtcccgt tgctcccccaatccctgttttaagggggtgtcctgtatggaaacatatgagtaccccggt taccgctgtgggccctgtcccgagggcaccgctggcaatggcacccactgccaggacatt gacgagtgctccctggcccagccctgtttctcaccatcggggtgtgtgaacacagcctcg gggttccgctgcgacccctgccccccggggtactacggcccgcccctcagcggggtggga gtggagtttgccaagagccacaagcaggagtgcgcggacatcgacgagtgcggggagggc agcaacgcctgcgtgcccaactcggtgtgcgccaacacagtgggctccttcaggtgtggt cagtgcaaactgggctttgtgggcaaccagacagccggctgcttcccgcgcaagtcctgc agcacgctgacctttaacccctgcgacgtcaacgcccactgcctcatggagaggaacggg gaggtgtcctgtgcgtgcaacgtgggctgggcgggaaacggccacacctgtggccccgac accgatattgacggctaccccgaccaatcgctgccctgcatcgacaacgacaagcactgc aagcaggacaactgcgtcttcacccccaactccgggcaggaggacgccgataacgacggg atcggggaccagtgcgacgaggacgcggacggtgacggcatcaagaatgtggaggataac tgccgcctggtgcccaacaaggaccagcagaactcggacacggactcgttcggggacgcc tgcgacaactgccccaacgtgcccaacatcaaccagcaggacacggacagcaacggggag ggcgacgcctgcgataacgacatcgacggagacggtatccccaacgtcctagacaactgc cccaaggtcccgaacccccttcagactgaccgggatggagacggggtgggcgacgcgtgt gacagctgtcctgagatcagcaaccccacccagacggatattgacaatgaccttgtggga gatgtttgtgacaccaaccaggacctgtctttaaaagagtcgaagagaggtgggttacct gttgtgacacactttctgtgtgtgtgttcccagggcatggagattgtgcagaccatgaac agtgatcctgggctggctgtaggctacacggccttcaacggggttgacttcgagggcacc ttccacatcaacacggtgacggacgacgactacgccggcttcatcttcggctaccaggac tcctccagcttctacgtggtgatgtggaagcagacggagcaggcgtactggcagtctgtg cccttccgcgccgtggcggcgccggggctgcagctgaaggcggtgaagtctcggacgggg ccgggcgagtttctgaggaacgcgctgtggaacacgggcgacacgccgggcgaggtcacc ctgctgtggaaggacccccgcaacgtgggctggagggacaagacctcctaccgctggcac ctcacccaccgcccgcaggtgggatacatccgggtgaagctgtatgaagggcctggattg gtcgctgactccggggtgatcatcgatacctcaatgagagggggccggctgggcgtgttc tgtttctcccaggagaacgtcatctggtccaatctgcgctaccgctgcaatgacactgtg cctgaagactttgaaccgttccgaaagcagctacagcacaactacaagctgtga

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