Lepisosteus oculatus (spotted gar): 102689979
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Entry
102689979 CDS
T07349
Symbol
npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
loc03000
]
102689979 (npas1)
Transcription factors [BR:
loc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
102689979 (npas1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
PAS_9
HLH
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
102689979
NCBI-ProteinID:
XP_006627773
Ensembl:
ENSLOCG00000014899
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All DBs
Position
LG2:68298857..68341963
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AA seq
693 aa
AA seq
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MAAGPSVSEGRRICIEWDLLQGLLTKPPPLPCLQNLRKEKSRNAARSRRGKENFEFFELA
KMLPLPGAITSQLDKASVIRLTISYLRMRDFSSQGDPPWSPLQERGPHNKAVGRTMSSVA
TDVFEQHLGGHLLQSLDGFVFVVSHDGRFLYISETVSIYLGLSQVELTGSSVFDYIHPAD
HVEMAERLGMRPHLQGGADSHAANESASSSASTSSLAEAPEPEETLSPLCPEPDPLERSF
FIRMKSTLTKRGLHVKSSGYKVIHVTGRLHSRPGSSSPRTLGLVALAHTLPPSTLSEVRM
ESHMFVFRVNLDLQVTYCENRISDYMDLSPAEVIGHSCYRFVHVQDLDRLRQSHEDLLRK
GQVVTGYYRWLQRRGGFLWVQSCATVSINMKTPHDRNIIWVNYVLSRAELPDTPLDIQQL
PERLRPERTTPRQHPKGSPSLQRPDCSGSGSEARETFLSDSPSDERRKRSRRHASGERPP
EARKMQPDLSSVESDAEDDVRRDYKRLKAEEGQCPGTGEEEEAGLPKGCVATRQPNGTSP
PRIKTEREPLAGPRSRSPAPSRPSPPAGPADRGCPPTGALSPETPPRSLFTPASPALCPP
PGPGRDQEALHRLALPPALGAQGPQSLFAPSTIRYAPAEGVGLGAPAHLKAPPSLFPLPP
FSSGFGAPCSPFPPILPFCVNGLRGTAARKEED
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggggccgtcggttagcgaggggaggcgcatttgcatagagtgggaccttctg
cagggtctgctgaccaaacctccccctcttccctgcctgcagaacctgcggaaggagaaa
tcgcggaacgcggcccgctcgcggcgagggaaggagaactttgagtttttcgagctggcg
aagatgctgcccctgcccggtgccatcaccagccagctggacaaagcctccgtcatccgc
ctcaccatcagctacctgcgcatgagggacttctccagccagggagacccgccgtggagc
cccctacaggagagagggccacacaacaaggctgtgggaaggacaatgagctcagtggcc
actgatgtctttgagcagcacctgggaggacacctgctgcagtccctggatggctttgtg
tttgtggtcagtcacgatggccggttcctctacatctctgagacagtgtccatctacctg
ggcctctcgcaggtggagctgaccggcagcagcgtgttcgactacatccaccccgctgac
catgtggagatggccgagagactgggcatgaggccgcacctccaaggcggggctgattca
cacgctgccaatgagagcgcatccagttcagcatctacctcctcattggccgaggcccca
gagccagaggagaccctcagtcctctgtgcccagagcccgatcccctcgagagaagcttc
ttcatccgcatgaagtccaccctcactaagcgcgggcttcacgtcaagtcttcagggtac
aaggtgatccacgtgacggggcggctccacagtaggcccggctcctcctctccgcgcact
ctgggtctggtggccctggctcacacgctgccgccctccacgttgagcgaggtgcgcatg
gagagtcacatgtttgtcttccgggtcaacctggacctgcaggtcacctactgtgagaac
aggatctcagactacatggacctgagtcctgcggaggtgattggacacagctgctaccgg
tttgtccacgtgcaggacctggatcgcctccggcagagtcatgaggatttgctgcggaag
ggacaggtggtgactgggtattaccggtggcttcagcgtcgtggtggcttcctgtgggtc
cagtcctgcgccactgtgtccatcaacatgaagacgccccacgaccgaaacatcatctgg
gtcaactatgtcctgagccgagcggagctcccagacaccccccttgacatccagcagctg
cccgagaggctgaggccagagagaacgaccccccggcagcatcccaaaggatccccttcg
ctccagcggccagactgcagtggctccgggtccgaggcaagggagacgttcctgtcagac
agcccgtcggacgaaaggaggaagaggagccggcgacacgcctctggagaacggccccca
gaagcgaggaagatgcagccggacttgtctagtgtggaaagtgacgctgaggatgatgtc
cggagagactacaagcggctcaaagctgaggaaggacagtgtccaggaacgggcgaggaa
gaggaggcagggctgccaaaggggtgcgtggccacccggcagccgaacggcacaagccct
cctcgcatcaagaccgagcgggagcccctggctgggcctcggagccgctccccagccccc
tcgcggccctcaccgccggcagggcctgctgacaggggctgccccccgaccggcgccctg
tcccctgagaccccaccccggagcctcttcacgcctgcttcccccgccctgtgccccccg
cccgggcccggccgagaccaggaggctctgcacagactggcgctgccccccgccctcggg
gcgcagggcccccagagcctgttcgcccccagcaccatccgctacgcccctgccgagggg
gtcggcctgggggctcccgcccacctcaaggcgcccccctccctcttccctctgcccccc
ttcagcagcggtttcggggcaccttgctccccgttcccccccatcctgcccttctgcgtc
aatgggctccgaggcaccgctgccaggaaggaggaggactga
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