Lepisosteus oculatus (spotted gar): 102690100
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Entry
102690100 CDS
T07349
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
loc03009
]
102690100 (ddx52)
Enzymes [BR:
loc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102690100 (ddx52)
Ribosome biogenesis [BR:
loc03009
]
Eukaryotic type
90S particles
Helicases
102690100 (ddx52)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
SNF2-rel_dom
AAA_19
SecA_DEAD
Motif
Other DBs
NCBI-GeneID:
102690100
NCBI-ProteinID:
XP_015222817
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Position
LG22:complement(9312049..9320766)
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AA seq
426 aa
AA seq
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MDAYDLFRKLGAGAKFDFKKFGKDAERFKPCSPRLCSYQVASQRGFSVWAPATGAGAASG
QPEGILWTSALDKKAEDSLGERKDKPSWKRLKHLHQEKVNRLRHQNRINVRGTDVPDPVA
TFAELAEEYQVDPRLIQNIRAAGFQTPTPIQMQAIPLMLHNREILACAPTGSGKTVAFCL
PVLAHLRKPVNKGFRALVISPTRELASQTYRELLKLSEGVGFRVHMIHKGADAAKKFGPK
SAKKFDILVTTPNRLIYLLQQDPPAVDLGNVEWLVVDESDKLFEDGKTGFRDQLATIFLA
CTCPRVRRAMFSATFAPDVEQWCQLNLDSMVSVSIGQRNSAAETVEQELLFVGTENGKLL
AMRDLVKKGFHPPVLVFVQSIERARELFHELVYEGINVDVIHAERTQQQVSPGAPSPGGT
QLPPEP
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggatgcatacgacttgttccgtaagctgggagcgggggccaagtttgacttcaaaaag
ttcggcaaagatgcggagaggtttaagccctgcagcccgaggctctgttcgtaccaggtg
gcgtctcagcgtggtttctctgtctgggctcctgctacaggggcgggcgctgccagcggc
cagccggaggggatcctgtggacgtcggcgctggacaagaaggcggaggactctctgggg
gagaggaaggacaagccctcctggaagaggttaaagcacctgcaccaggagaaggtcaac
cgcctccggcaccagaaccggatcaacgtccgcggcaccgacgtccccgaccccgtcgcc
accttcgcggagctggcggaggagtaccaggtcgacccgcggctcatccagaacatccgc
gcggcggggttccagacgcccacccccatccagatgcaggccatccccctcatgctgcat
aaccgggagatcctggcctgcgcgcccacgggctccgggaagacggtggccttctgcctg
cctgtcctcgcccacctgcgcaagcctgtcaacaaaggcttccgggctctcgtcatctcc
cccaccagagagctggccagccagacctaccgagagcttctcaagctgtccgagggagtg
ggcttccgggtgcacatgatccacaaaggagctgatgccgccaagaaatttggacccaag
tctgccaagaaatttgacatcctggtgacgactcccaacaggctgatttacctcctgcag
caggaccccccggctgtggacctgggcaatgtggagtggctggtcgtggacgagtccgac
aagctcttcgaggacgggaagacgggcttcagggaccagctggccacgatcttcctggcc
tgcacctgcccccgggtcaggagggccatgttcagcgccaccttcgcccccgacgtggag
cagtggtgccagctgaacctggacagcatggtgtccgtctcgatcggccagaggaattcg
gccgctgagacggtggagcaggagctgctgttcgtgggcacggagaacgggaagctgctg
gcgatgagggatctggtcaagaagggcttccacccgccggtgctggtgttcgtgcagtcc
atcgagcgcgcccgcgagctcttccacgagctggtctacgagggcatcaacgtcgacgtc
atccacgctgagcgcacgcagcagcaggtatcccccggcgccccgtccccagggggcaca
caactgcctccagaaccgtga
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