Lepisosteus oculatus (spotted gar): 102690279 Help Entry 102690279         CDS       T07349                                  Symbol itgb5 Name (RefSeq) integrin beta-5   KO K06588   integrin beta 5 Organism loc  Lepisosteus oculatus (spotted gar) Pathway loc04145   Phagosome loc04148   Efferocytosis loc04510   Focal adhesion loc04512   ECM-receptor interaction loc04810   Regulation of actin cytoskeleton loc04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:loc00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     102690279 (itgb5)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     102690279 (itgb5)    04148 Efferocytosis     102690279 (itgb5)   09144 Cellular community - eukaryotes    04510 Focal adhesion     102690279 (itgb5)   09142 Cell motility    04820 Cytoskeleton in muscle cells     102690279 (itgb5)    04810 Regulation of actin cytoskeleton     102690279 (itgb5)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:loc04131]     102690279 (itgb5)   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:loc04515]     102690279 (itgb5) Membrane trafficking [BR:loc04131]  Endocytosis   Phagocytosis    Integrins (complement receptors)     102690279 (itgb5) Cell adhesion molecules [BR:loc04515]  Integrins   Integrin beta subunits    102690279 (itgb5) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Integrin_beta Integrin_B_tail EGF_integrin PSI_integrin Integrin_b_cyt I-EGF_1 EGF_2 vWA_SIBA-E EGF_Teneurin EGF_TEN RNA_pol_A_CTD Motif Other DBs NCBI-GeneID:  102690279 NCBI-ProteinID:  XP_006636317 Ensembl:  ENSLOCG00000002706 LinkDB All DBs Position LG12:complement(4757272..4797265) Genome browser AA seq 802 aa AA seqDB search MLRRRLLIYSVISCLVLEVLIGGVKGLNICAGGSATSCEECLLIHPSCAWCAQEEFGRAM TVASRCDFSQNLLGRGCGRGFIESPRSSMMVLQNKPLSSKGSGPTQYDVIQIMPQKIALN LRPGDQVSLEVQVRQVEDYPVDLYYLMDLSLSMKDDLDNIRNLGTKLAEEMKKLTSNFRL GFGSFVDKNISPFSYTAPKYQDNPCNGYKLFPNCVPSFGFRHLLSLTDKVNRFNEEVKKQ VVSRNRDAPEGGFDAILQAAVCKEKIGWRKEAFHLLVFATDDVPHLALDGRLGGLVQPHD GQCHLNEKNEYSASTKMDYPSLALLGEKLAENNIYLIFAVTKRLYVIYKNFTALIPGTTV EILDMDSKNIIQLIINAYNNIRSKVELTVWDHPEDISLAFTATCQDGQPLPGLRKCADLK IGDTVSFNVTVDARGCPAAEAQRRFTIKPVGFKDTLELTVDYSCSCGCTGLTETNSSRCS GAGTYACGTCRCEPGYLGAQCECQEGGAAHLHQTMCREAKGKQICSGRGECSCNQCLCYN SAFGKIYGTFCECDDFSCARHKGILCSGHGECFCGECKCHAGYIGDNCNCSTETDSCLSD AGQICSGRGSCVCGKCQCSEPGAFGDACEKCPTCPDACGTKRECIECRLFNSGRLADNQT CERVCKDKITTVDTLETENPNAVLCLYKTENDCVMKFTYSEHASGHSILEALKEPECGAA PDALTVLLAVVGSILLVGLGLLVIWKLVITIHDRMEFARFQSARSRARYEMASNPLYKQP ISSHTVETVFNMRSRFCNGAVH NT seq 2409 nt NT seq  +upstreamnt  +downstreamnt atgttgaggagaaggctcttaatttactctgtaattagctgtttggttttggaagttctg atcggcggagttaaaggtctcaatatttgcgccggaggaagcgctacctcctgtgaagaa tgcctgctcatccatcctagctgtgcctggtgcgctcaggaggaattcgggagggcgatg acggtcgcgtcccgctgcgacttcagccagaacctgctggggaggggctgcgggaggggc ttcatcgagagtcccaggagcagcatgatggtcctgcagaacaagcccttaagttccaaa ggctccggacccacccagtatgatgtcattcagataatgccgcagaagatagccctgaac ctgcggcctggtgaccaggtgtccctggaggtgcaggtgcgtcaggtggaggactaccca gtggacttgtactacttgatggacctctctctctccatgaaggacgacttggacaacatc cgcaacctggggaccaaactggcagaggagatgaaaaagctcaccagcaactttcgcctg ggatttggatcttttgtagataaaaatatttctcccttctcctacacagcgcccaaatac caggacaacccatgcaatgggtacaagctgtttccgaactgtgttccttccttcggtttc cgccacctcctctccctgaccgacaaagtgaacaggttcaacgaggaggtcaagaaacag gtggtttctcggaaccgcgacgcgccggagggaggcttcgatgccattctgcaggctgct gtgtgcaaggaaaagattggctggaggaaggaagctttccacttgctggtctttgccacg gatgacgttcctcacctcgctctggatggccggctgggcggactggtgcagccccacgac gggcagtgccacctgaatgaaaagaacgagtacagtgcctccacaaagatggattatcca tctcttgcactcctgggagaaaagctggcagaaaacaacatctatctcatcttcgctgtg acaaagaggctatatgtgatttacaagaatttcactgcactgataccaggtacaactgtt gaaatcctcgacatggactcaaagaacattatacaactgatcattaatgcttacaataac atccggtcgaaagtggagctgaccgtctgggatcacccagaagacatcagtctggcgttc actgcgacctgtcaggacggccagcccttgcccggcctccggaaatgtgctgacctcaag attggagacacagtgtctttcaacgtgacggtggacgcgcgaggctgccctgccgcggag gcccagcggaggttcaccatcaagcccgtgggcttcaaggacacgctggagctgaccgtg gactacagctgctcctgtggctgcacgggcctcacggagaccaacagcagcaggtgcagc ggcgccggcacctacgcgtgcggcacctgcaggtgcgagcccgggtacctgggggcgcag tgcgagtgccaggaggggggggcggctcacctgcaccagaccatgtgccgagaagccaag gggaagcagatctgcagcggcaggggagaatgtagctgcaaccagtgcctctgctacaac agcgcctttgggaagatctatggcaccttctgcgagtgtgatgacttctcctgcgcccgg cacaaaggcatactttgctcaggtcacggggagtgcttctgcggggagtgcaagtgccac gcgggctacatcggcgacaactgcaactgctcgacggagacggactcgtgcctgtcggac gcggggcagatctgcagcggcagggggagctgcgtctgcgggaagtgccagtgcagcgag ccgggggccttcggggacgcgtgcgaaaagtgccccacctgccccgacgcctgcggcacg aaacgggagtgcattgagtgccgcctgtttaactctggaagacttgctgacaaccagacc tgtgaaagggtatgcaaggataagatcacgactgtagacactcttgaaacggaaaaccca aatgcagtactttgcctgtataaaactgaaaatgactgtgttatgaagttcacgtactct gaacatgccagcggccattcaatcctggaagcactgaaggagccagagtgtggtgctgct cccgatgccctgactgtgctgctggctgtcgttggaagcatcctactggttggccttggg ctgctggtgatctggaagctggttatcacgatccatgaccggatggagtttgcaaggttt cagagtgcccgctccagggccagatatgaaatggcttccaaccctctgtacaagcagccg atctctagccacacagtggagaccgtgttcaacatgcggagcaggttctgcaatggagca gtccactga

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