Lepisosteus oculatus (spotted gar): 102690281
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Entry
102690281 CDS
T07349
Symbol
dync1i2
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04145
Phagosome
loc04814
Motor proteins
loc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102690281 (dync1i2)
09142 Cell motility
04814 Motor proteins
102690281 (dync1i2)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102690281 (dync1i2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
loc03036
]
102690281 (dync1i2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
loc04812
]
102690281 (dync1i2)
Chromosome and associated proteins [BR:
loc03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
102690281 (dync1i2)
Cytoskeleton proteins [BR:
loc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
102690281 (dync1i2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WDR55
Beta-prop_EML
Dynein_IC2
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WD40_RFWD3
Beta-prop_IP5PC_F
Beta-prop_SPT8
Beta-prop_DCAF4
Nbas_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
102690281
NCBI-ProteinID:
XP_006636574
Ensembl:
ENSLOCG00000007703
LinkDB
All DBs
Position
LG12:complement(16585487..16618336)
Genome browser
AA seq
645 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKEADQKKDAAPPPDDSDLEKKRREAE
ALLQSMGITPDVPVAQPLRVVTADTCLFHYLVPPPMSPSSKSVSTPSETGSQDSGDGAVG
ARTLHWDTDPSVLQLHSDSDLGRGPLKLGMAKVTHVDFPPREIVSYTKETQTPVMTEQKE
EEDEEEEIAPPKPVVALQEEKPQQNEEEEAPPHELTEEEKLQILHSEEFLSFFDHSTRIL
ERALSERVDVFFDYSGRDLEEKEGEIQAGTKLSLNRQFMDERWSKHRVVTCLDWSPQYPE
LLVASYNNNEDAPHEPDGVALVWNMKYKKTTPEYVFHCQSAVMSAAFAKFHPNLVVGGTY
SGQIVLWDNRSSKRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKMCSWSLD
MLSQPQDSMELVHKQSKAVAVTSMSFPLGDVNNFVVGSEEGSVYTACRHGSKAGISEMFE
GHQGPITGIHCHTAAGPIDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNSDYVYDVMWS
PTHPALFACVDGVGRLDLWNLNNDTEVPTASVMVEGNPALNRVRWAHSGREIAVGDSDGQ
ILIYDVGEQIAVPRNDEWTRFARTLAEINANRADAEEEAAARLSA
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacaaaagcgagctgaaggccgagctggagcggaagaagcagcgcctggctcag
atcagggaggagaagaagaggaaagaggaggagcgcaagaagaaagaggccgatcagaag
aaggatgcagctcctccccccgatgactctgacctggagaagaaacggcgagaggctgaa
gcgctgctgcagagcatgggcatcactcccgatgtgccagttgcgcagccactccgagta
gtaacagcggatacctgtctgtttcactatttagtccctccacctatgtctccatcctcc
aagtctgtgagcacgcccagcgagactggaagccaagactcaggcgatggcgccgttgga
gctaggacgctgcactgggacactgatccatcagttctgcagcttcactctgattctgat
ctggggcgaggtccccttaagctgggaatggctaaagtcactcatgtggactttccgcca
cgtgaaattgtgtcctacaccaaagaaactcaaacacccgtcatgacggagcagaaggaa
gaagaagatgaagaggaggagatcgcccctcccaaaccagtggtggcactccaggaggag
aaacctcagcagaatgaggaagaggaagctcccccccacgagctgaccgaggaggagaag
ctgcagatcctgcactctgaggagttcctgtccttcttcgatcacagcacccgcatcctg
gagcgcgccctgtccgagcgggtggacgtcttcttcgactacagcggccgggacctggag
gagaaggagggagagatccaagccgggactaagctgtctttgaacaggcagttcatggat
gagcgttggtccaaacaccgtgttgtcacctgccttgattggtctcctcagtatcctgag
ctgcttgttgcctcatacaacaacaacgaggatgccccccatgagccagatggtgtggcc
cttgtgtggaacatgaagtacaagaaaaccacaccagagtatgtctttcattgccagtca
gccgtgatgtccgccgcctttgcaaaatttcaccccaacctggtggtgggaggcacttac
tctgggcagatcgtgctgtgggataaccgcagcagcaagaggacccccgtgcagaggact
ccgctgtcggcagcagcacacacgcacccagtgtactgtgtgaatgtggtaggcacgcaa
aatgcccacaaccttatcagcatctccactgatgggaagatgtgctcctggagtctggac
atgctgtcccagccacaggacagcatggagctcgttcacaagcagtccaaggctgtggct
gtcaccagcatgtctttcccacttggagacgtcaataactttgtggtaggaagtgaggag
ggctccgtttacacagcctgccgtcatggaagcaaagcgggcatcagtgagatgttcgaa
ggccaccaaggacctatcacaggtatccactgtcacactgcagcaggacccattgatttc
tcccacttgtttgtcacctcatcttttgactggacagtgaaactgtggaccactaagaac
aacaagccattgtactcgttcgaggacaactcggactacgtgtatgatgtcatgtggtcc
cccacccacccggccctgtttgcctgtgtggacggtgtgggccgactcgacctgtggaac
ctcaacaacgacaccgaggttcctacagcgagtgtaatggtggaaggaaaccctgctttg
aaccgtgtcagatgggcccactcaggaagagagattgctgttggagattcagatgggcag
atacttatttatgatgttggagagcaaattgccgttccacgcaatgacgaatggacccgt
tttgcccgcactctggcagaaattaatgccaacagagctgacgctgaagaggaagctgct
gcacgtttatcagcctga
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integrated database retrieval system
