KEGG   Lepisosteus oculatus (spotted gar): 102690457
Entry
102690457         CDS       T07349                                 
Symbol
cdk7
Name
(RefSeq) cyclin-dependent kinase 7
  KO
K02202  cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
Organism
loc  Lepisosteus oculatus (spotted gar)
Pathway
loc03022  Basal transcription factors
loc03420  Nucleotide excision repair
loc04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:loc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    102690457 (cdk7)
  09124 Replication and repair
   03420 Nucleotide excision repair
    102690457 (cdk7)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    102690457 (cdk7)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:loc01001]
    102690457 (cdk7)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:loc03021]
    102690457 (cdk7)
   03019 Messenger RNA biogenesis [BR:loc03019]
    102690457 (cdk7)
   03400 DNA repair and recombination proteins [BR:loc03400]
    102690457 (cdk7)
Enzymes [BR:loc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     102690457 (cdk7)
    2.7.11.23  [RNA-polymerase]-subunit kinase
     102690457 (cdk7)
Protein kinases [BR:loc01001]
 Serine/threonine kinases: CMGC group
  CDK family
   102690457 (cdk7)
Transcription machinery [BR:loc03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     102690457 (cdk7)
Messenger RNA biogenesis [BR:loc03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Capping factors
     102690457 (cdk7)
DNA repair and recombination proteins [BR:loc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     102690457 (cdk7)
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr Seadorna_VP7 ABC1 Kinase-like Haspin_kinase APH
Other DBs
NCBI-GeneID: 102690457
NCBI-ProteinID: XP_006626790
Ensembl: ENSLOCG00000006117
LinkDB
Position
LG2:complement(15690550..15702414)
AA seq 346 aa
MMAVDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNTIVAIKKIKVGHRAEAKDGINRTA
LREIKLLQELSHPNIIGLLDAFGHKSNISLVFDYMETDLEVIIKDTSLVLTPANIKAYIL
MTLQGLEYMHQHWILHRDLKPNNLLLDENGVLKLADFGLAKAFGSPNRVYTHQVVTRWYR
SPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTKIFEALGTPTEETWPG
LTSLPDYISFKMFPGTPLEHIFSAAGDDLLDLLRGLFTYNPCTRITATQALKKRYFSNRP
GPTPGPQLPRPNCSVEALKEQENFKIGVKRKRDGTEQGSLKKKLIF
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgatggccgtggatgtgaaatccagagcaaagagatacgaaaagcttgattttcttgga
gagggccagttcgcaactgtttacaaagcaagagataagaatacaaacaccatagttgcg
atcaaaaagattaaagttggtcacagagctgaagccaaagatggtattaaccgaacagcc
cttcgagaaattaaactgcttcaagagctaagtcacccaaatataattggacttctagat
gcttttggacataaatccaatatcagtctggtctttgactacatggaaacagatctagag
gtaataataaaggacaccagcctggtcttgactcctgcaaacatcaaagcatatatactg
atgacacttcagggtctagagtatatgcatcaacattggatcttacacagggatctaaaa
ccaaacaacttgctattggatgaaaatggtgtcctgaagcttgcagactttggtctggct
aaggcttttggaagtcccaatagggtgtacactcaccaagtagtaacaaggtggtacaga
agtccagagcttctcttcggtgccagaatgtatggtgtgggtgtagacatgtgggcagtt
ggctgtatattagctgagttgctcctaagggtaccctttttaccaggagactcagatctt
gaccagctaaccaaaatttttgaagctttaggaactccgacagaagagacatggcctggc
ctgaccagccttcctgactacatatcatttaaaatgtttcctggaacacccctagagcac
atattcagtgcagcaggtgatgatttactggacctgttacgaggattatttacatacaat
ccctgcacacgaatcacggcaacacaggccttgaaaaagagatatttcagcaacaggcct
ggcccaactccaggaccccaacttccaaggcctaactgctcagtggaagccctaaaagaa
caggaaaactttaaaattggagttaaaaggaaacgcgatggtacagaacaaggatcactg
aagaaaaaattgatattctaa

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