Lepisosteus oculatus (spotted gar): 102690457
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Entry
102690457 CDS
T07349
Symbol
cdk7
Name
(RefSeq) cyclin-dependent kinase 7
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03022
Basal transcription factors
loc03420
Nucleotide excision repair
loc04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102690457 (cdk7)
09124 Replication and repair
03420 Nucleotide excision repair
102690457 (cdk7)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
102690457 (cdk7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
loc01001
]
102690457 (cdk7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
loc03021
]
102690457 (cdk7)
03019 Messenger RNA biogenesis [BR:
loc03019
]
102690457 (cdk7)
03400 DNA repair and recombination proteins [BR:
loc03400
]
102690457 (cdk7)
Enzymes [BR:
loc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
102690457 (cdk7)
2.7.11.23 [RNA-polymerase]-subunit kinase
102690457 (cdk7)
Protein kinases [BR:
loc01001
]
Serine/threonine kinases: CMGC group
CDK family
102690457 (cdk7)
Transcription machinery [BR:
loc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
102690457 (cdk7)
Messenger RNA biogenesis [BR:
loc03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
102690457 (cdk7)
DNA repair and recombination proteins [BR:
loc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
102690457 (cdk7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Seadorna_VP7
ABC1
Kinase-like
Haspin_kinase
APH
Motif
Other DBs
NCBI-GeneID:
102690457
NCBI-ProteinID:
XP_006626790
Ensembl:
ENSLOCG00000006117
LinkDB
All DBs
Position
LG2:complement(15690550..15702414)
Genome browser
AA seq
346 aa
AA seq
DB search
MMAVDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNTIVAIKKIKVGHRAEAKDGINRTA
LREIKLLQELSHPNIIGLLDAFGHKSNISLVFDYMETDLEVIIKDTSLVLTPANIKAYIL
MTLQGLEYMHQHWILHRDLKPNNLLLDENGVLKLADFGLAKAFGSPNRVYTHQVVTRWYR
SPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTKIFEALGTPTEETWPG
LTSLPDYISFKMFPGTPLEHIFSAAGDDLLDLLRGLFTYNPCTRITATQALKKRYFSNRP
GPTPGPQLPRPNCSVEALKEQENFKIGVKRKRDGTEQGSLKKKLIF
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgatggccgtggatgtgaaatccagagcaaagagatacgaaaagcttgattttcttgga
gagggccagttcgcaactgtttacaaagcaagagataagaatacaaacaccatagttgcg
atcaaaaagattaaagttggtcacagagctgaagccaaagatggtattaaccgaacagcc
cttcgagaaattaaactgcttcaagagctaagtcacccaaatataattggacttctagat
gcttttggacataaatccaatatcagtctggtctttgactacatggaaacagatctagag
gtaataataaaggacaccagcctggtcttgactcctgcaaacatcaaagcatatatactg
atgacacttcagggtctagagtatatgcatcaacattggatcttacacagggatctaaaa
ccaaacaacttgctattggatgaaaatggtgtcctgaagcttgcagactttggtctggct
aaggcttttggaagtcccaatagggtgtacactcaccaagtagtaacaaggtggtacaga
agtccagagcttctcttcggtgccagaatgtatggtgtgggtgtagacatgtgggcagtt
ggctgtatattagctgagttgctcctaagggtaccctttttaccaggagactcagatctt
gaccagctaaccaaaatttttgaagctttaggaactccgacagaagagacatggcctggc
ctgaccagccttcctgactacatatcatttaaaatgtttcctggaacacccctagagcac
atattcagtgcagcaggtgatgatttactggacctgttacgaggattatttacatacaat
ccctgcacacgaatcacggcaacacaggccttgaaaaagagatatttcagcaacaggcct
ggcccaactccaggaccccaacttccaaggcctaactgctcagtggaagccctaaaagaa
caggaaaactttaaaattggagttaaaaggaaacgcgatggtacagaacaaggatcactg
aagaaaaaattgatattctaa
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