Lepisosteus oculatus (spotted gar): 102690510
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Entry
102690510 CDS
T07349
Symbol
ube4b
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X2
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04120
Ubiquitin mediated proteolysis
loc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102690510 (ube4b)
04120 Ubiquitin mediated proteolysis
102690510 (ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
loc04121
]
102690510 (ube4b)
Enzymes [BR:
loc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102690510 (ube4b)
Ubiquitin system [BR:
loc04121
]
Ubiquitin ligases (E3)
U-box type E3
102690510 (ube4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
102690510
NCBI-ProteinID:
XP_006642049
Ensembl:
ENSLOCG00000006740
UniProt:
W5MIE3
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All DBs
Position
LG25:complement(12340758..12381491)
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AA seq
1186 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPSTPLSTPLTSPQRETPPGAPPGPSGAVLQPPPPAP
SNSLGLAVHSVTPATSPVGAAGVPYRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDID
SVSCEKSMSQVDVDSGIENMEVEESDRREKRGLGDKESSSGSEVSEEQALQLICKIFRVS
WKERDRDVVFLPSLAAEFRQNPKDVCSGFKDLISQILMEVLMISTQGRDDNPFASLTATS
QPIATAKSPDRYLVLNPSSSQGSSPMFASAGSFGASSLSSLGASGGGGASDSASDRFTIE
PCKETEMLNYLMERFDSVGMEERKAPKMCSQPSVSQLLSNIRSQCISHAALVLQGSLTQP
RSLLQQSLLVPYMLCRNLPYGFIQELVRMTHQEDDVFRQIFVPILQGLALAAKECSFDSD
NFKYPLMALAELCEIKFGKTHPVCNLITSLPLWCPDPLSQGTGREIQRLSYIGAFFSLSV
FSEDDPKIGDKYFSGPAITLENTRVVSQSLQHYLESARGDLFKILHNILLNGETREAALN
YMAAVVNRNVKKAQMQTDDRLVSTDGFMLNFLWVLQQLSMKIKLATVDPFYIFHPRCRLN
VTTDETRLKATMEDLKSWLEELYKDPSKFSEPKFPTECFFLTLHAHHLSILPGCRRYIRR
LRAIRELNRTVEELKNSESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDENL
LRRCLQFYGMVIQLLLRIVDPAYPSVTLPLNPEIPKVFAALPEFYIEDVAEFLLFVVQYC
PQVLYEPCTQDIVTFLIVFICSQNYIRNPYLIAKLVEVLFVTNPAIQPRTQRFSEMMENH
PLSIKQLVPALMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFLEEFNS
GKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPREQQQSRQSQLTQD
ERMSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVE
NPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSRELFEEVISKMKKAGIKSTI
AIEKFKLLSEKVEEIVARNSQSEIDYSDAPDEFKDPLMDTLMTDPVRLPSGNIMDRTIIL
RHLLNSPTDPFNRQPLTENMLESVPELKERIQMWMREKQQSGQQSL
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atggaagaactcagtgccgatgagatccggaggagacggctcgcccggctggcaggaggg
cagacctcgcagcccagcacccccctcagcacccccctgacctcccctcagagagagacc
ccgccgggggcccccccaggtccctcgggggccgtgctgcagcccccaccgcctgcgccg
tcgaacagcctggggctggccgtccacagcgtcaccccggccacgtcgcccgttggggct
gcaggggtgccttatcggagccagagcagtgaaggggtgagctctctcagcagctcccca
tctaacagccttgaaactcagtcccagagcctctcccggtcgcagagcatggacatcgac
agcgtctcctgtgagaagagcatgtcccaggtggatgttgactcaggaattgaaaacatg
gaggtggaggagagtgatcgcagagagaagagaggcctgggtgacaaggagtcttcctcg
gggtcggaagtgtcggaggaacaggcgcttcagctgatctgcaagattttccgggtgtcc
tggaaagagcgagatcgggacgtcgttttcctcccttcgcttgctgccgagttcagacaa
aacccgaaagacgtctgctccggcttcaaggacttgatcagccagatcctgatggaggta
ctcatgatatcgacccaggggagggacgacaaccccttcgccagcctgactgccacgtcc
cagccaatcgcaaccgccaaatccccagaccgctacctggtgctgaacccttcctccagt
cagggcagcagccctatgttcgcctccgcaggctcgtttggcgccagctcgttatccagc
cttggcgcgtctggtgggggcggagcttcagattctgccagtgatcgtttcaccattgag
ccgtgcaaagagacagagatgctgaattacctcatggagcgcttcgacagcgtgggcatg
gaggagaggaaggctccgaagatgtgcagtcagccatctgttagccagctgctaagcaac
attagatcccagtgtatttcccatgctgctttggtgttacaaggcagtctcacacagcca
aggtctttgctgcagcagtcattgttagtaccctacatgctgtgccgaaacctaccttat
ggcttcatacaagagctcgtcagaatgactcaccaggaagatgatgttttcagacagatc
ttcgtacctatactccaaggcctggctctggcagcgaaggagtgctcctttgacagcgac
aattttaagtatccccttatggctttagctgagctgtgtgaaattaagtttgggaagact
cacccagtctgcaacttgatcacctccctgcccttgtggtgtccagaccccctgagccag
ggcacaggcagagagatccagaggctgtcctacatcggagccttcttcagcctgtctgtc
ttttcggaagacgatcctaaaataggagacaagtatttctcaggacctgccatcaccctt
gaaaataccagagttgtcagtcagtctttgcaacattacctggaatcagcacggggcgac
ctgttcaaaatcctgcacaatattttgctcaacggcgagaccagggaagcagcgctgaac
tacatggcagctgtggtcaaccgcaatgttaagaaggctcagatgcagacggatgacagg
ctggtgtccacggacggcttcatgctgaacttcctgtgggtgcttcagcagctgagcatg
aagatcaagctggcgacggtcgaccccttttatatctttcaccccaggtgtcgcctgaac
gtcaccaccgacgagacgcggctcaaggccaccatggaggacctgaagagctggctggag
gagctctacaaggatccgtctaagttttccgagccaaagttccccacagagtgctttttc
ctgacgctgcacgcccatcacttgtccattctgcctggttgccggcgctacatccgaaga
ctgcgggccatcagagagctgaacaggacggtggaggagctgaagaacagcgagagccaa
tggaaggattccccgctagccaccagacaccgggagatgctaaagaggtgcaaaacccag
ctaaagaaactggtgcgctgtaaggcttgtgctgatgccgggctgctggatgagaacctg
ctgcggaggtgcctgcagttctatggcatggtcatccagctgctgctgcgcatcgtcgac
cccgcctaccccagcgtaaccctaccactgaacccggagatccccaaagtgtttgctgcg
ctgcctgagttctacatcgaagacgtggcggagtttctgctctttgttgtgcagtattgc
ccccaggttctctacgaaccctgcactcaggacatcgtgaccttcctcatcgtgttcatc
tgcagccagaattacatccgcaacccctacctgatcgccaagctggtggaggtcctgttc
gtgaccaatcccgccatccagccgcgcacacagcgcttctcggaaatgatggagaaccac
cccctctcgatcaagcagctcgtccccgcgctcatgaagttttatacagatgtggaacac
acaggagccaccagcgagttctacgacaagttcaccatccgctaccacatcagcaccatc
ttcaagagcctgtggcagaacattgctcaccatggcactttcctggaggagttcaactca
gggaagcagtttgttcgctacatcaacatgctgatcaacgataccaccttcctgctggat
gagagcctggagtctctgaaacgcatccatgaggtccaggaggagatgaagaacaaggag
cagtgggaccagctgccgcgggagcagcagcagagccggcagtcccagctgacgcaggat
gagcgaatgtcccgctcctaccttgctctggccacggaaacggtggacatgttccacatc
ctcaccaagcaggtccagaagccgttcctgcggcctgaacttggaccacgcttagctgcc
atgctgaacttcaaccttcagcagctgtgtgggcctaagtgccgtgaccttaaagtggag
aatccggagaaatatggttttgaacccaagaagctgctggatcagctgaccgacatatat
ctgcagctggactgcgcgcgctttgccaaggctatagctgatgatcagcggtcctacagc
agagaactctttgaagaagttatttccaagatgaaaaaagctggcatcaagtccaccatc
gctatagagaaatttaagctgctctccgaaaaggttgaagagatagttgccaggaattcg
caatcagaaattgactacagcgatgcgcctgatgaatttaaagatcccctaatggacaca
ctgatgactgacccagtgcgattgccctctggcaacatcatggaccggaccatcatcctg
cggcatttactcaactctcccactgaccccttcaacaggcagcccctgaccgagaacatg
ctggagtcggtgcccgagctgaaggagcggatccagatgtggatgagagagaagcagcag
agcgggcagcagtcgctgtga
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integrated database retrieval system
