Lepisosteus oculatus (spotted gar): 102690561
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Entry
102690561 CDS
T07349
Symbol
rnf34
Name
(RefSeq) E3 ubiquitin-protein ligase RNF34 isoform X2
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
loc04121
]
102690561 (rnf34)
Enzymes [BR:
loc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
102690561 (rnf34)
Ubiquitin system [BR:
loc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
102690561 (rnf34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP_RNF34_RFFL
RNF34L-like_3rd
zf-C3HC4_3
FYVE_CARP1-2
ARMET_C
FYVE
SAP
Prok-RING_4
Trm112p
SDE2_2C
Motif
Other DBs
NCBI-GeneID:
102690561
NCBI-ProteinID:
XP_006640289
Ensembl:
ENSLOCG00000005082
LinkDB
All DBs
Position
LG20:6911878..6929314
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AA seq
483 aa
AA seq
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MSAAETQCMPRRGCIDKCGPGAPAARCPCSRSRGRCRLPGLPVPTRHPERRRRARGALAG
ADQGRAAAAGIGGTPVLYPRGSAEVPGSDGGRRRREEIPAVLCHGQPISVSGENSPASVV
MKAGASSMWASCCGLLNEVMGTGAVRGQQPGFGAGAGPFRFAPSAGYSTYPTTSGNSSLV
CKACGLAFSVFRRKHICCDCKKNFCSLCSVLQENLRRCATCHLLKGTAFQRPQLMRLRVK
DLRQYLTLRNIPTDTCREKEDLVDLVLCHQGSDAEDDTDSGSVHSRSIFTTPLSTVRSTS
LQSSLSAPQGEELGRRGSSGTTNQDQGDGPTLSLLNLQNENAVQEAGTLSRKRARASLSD
VSSADEIEGLSVRQLKEILTRNFVNYSGCCEKWELVERVGRLYRENEQNRKSLENVSSSI
TAEGEKMQLPNEDNLCRICMDAVIDCVLLECGHMVTCTKCGKRMSECPICRQFVVRAVHV
FKS
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggctgagacacagtgcatgcctcgtcgcggttgtattgacaaatgcggtcct
ggcgcacccgccgcgcggtgcccgtgcagccggagccggggccggtgtcgcctgcccggg
ctgcccgtgcccacccgacacccggagcgccgccgccgagcgcgcggcgcattggccggt
gcggatcaggggcgcgcggcggctgctgggattggcggaacgcccgtcctttatccgcgc
ggctctgcagaagtccctggcagtgacgggggacgccgacgtagagaagagattcctgcc
gttctttgccatggtcagcctattagtgttagtggagaaaattcaccagcgagcgttgtc
atgaaggctggggcctcgtctatgtgggcttcatgctgtggtctgctgaatgaagtgatg
ggcaccggggcagtgcggggccagcagccgggcttcggggccggagccgggcccttccgg
ttcgcccccagcgcgggctactccacctaccccacgacctcagggaactccagcctcgtg
tgcaaggcctgcgggctggccttctccgtcttcaggagaaagcacatctgctgcgactgc
aagaagaacttctgctccctgtgctcggtgctgcaggagaacctccgcaggtgcgccacg
tgccacttgctgaaggggactgccttccagaggccgcagctcatgaggctgagggtgaag
gacctgcgtcagtacctgacgctgaggaacattcccacggacacgtgccgcgagaaggag
gacctggtggacctcgtcctgtgccaccagggctcggacgcggaggacgacacggactcg
ggcagcgtgcactccaggtcgatcttcaccaccccactgtccactgtgcgttccacatcc
ttgcagtcgtcgctgtctgcccctcagggagaagaactgggcagaagaggaagctcaggg
accacgaatcaggaccagggagacggtccaacactctcactcttgaacctacaaaatgaa
aatgcagttcaagaggccggcaccctgtcgcggaagcgggccagagcctccctgtcggac
gtctccagcgcagacgagatcgagggcctgtccgtgcggcagctcaaagagatcctgacg
cgcaactttgtgaattactcggggtgctgcgagaagtgggagctggtggagcgcgtcggc
aggctgtaccgggagaacgaacagaacaggaagtcattggaaaatgtgagcagcagcata
actgcagagggggagaagatgcagctcccaaacgaagataacctgtgccggatttgtatg
gatgctgtgatcgactgcgtgcttctggaatgcggccacatggtcacctgcaccaagtgt
gggaagagaatgagcgagtgtcccatctgtcgccagttcgtagtgcgggctgtgcacgtt
ttcaagtcctaa
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integrated database retrieval system
