Lepisosteus oculatus (spotted gar): 102690565
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Entry
102690565 CDS
T07349
Symbol
nlrc5
Name
(RefSeq) protein NLRC5 isoform X1
KO
K22615
NLR family CARD domain containing 5
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
loc04054
]
102690565 (nlrc5)
Pattern recognition receptors [BR:
loc04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
102690565 (nlrc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
LRR_6
Atypical_Card
AAA_16
AAA_25
AAA_30
NOD2_WH
AAA_22
AAA_28
AAA_19
TsaE
Motif
Other DBs
NCBI-GeneID:
102690565
NCBI-ProteinID:
XP_015223875
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All DBs
Position
LG23:complement(16069139..16088059)
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AA seq
1310 aa
AA seq
DB search
MTINRIELARRAALKMFRLSLAPRPQGEGAERNSKLKAVLHWPCFKQAAAMEEVGAADAA
AELAQVGPQLVEVLVGQPEDVLAQVSGLLGRDEQEELRRLADRGQRVSRLVELFEGKGGA
ACRRLFHAVCLLCTDLPMQLDTRLMSAAGDFSEHPSENEQRNEISPAPHNPDSQRRRAAA
DLPPAPLSQGKRPCVDFAESYEAAMKKLLLLDGRASQGIPHSLGLEESPLIVVQKNSAKL
RDRADRTWGDVPAPQDPEDSVDYVDIADLLKPPATAASRVTVLRGAAGTGKTRLVRDLAR
RWARGALAPFQFLFLFEFRQLNLIRRPLSLRQLLFDFFLPPEEGAGDAVLASVLARPQRV
CVIFDGYDEFRCRFAAPGPGRGLRPEEPLPVAELFSSLYCGRLLRGCTLLVTCRPKDVPD
LPLRAVDEVGEVLGFDYRRVEEYARRYFEHSPLRDQAVGSLLSNRNIRNMCCVPALCFIS
CVCLEFLLEKGPGLPKLPHTMTQFYIQILCAFLSKMQAGCSSGDPSSPLLQQYRTKIEAL
SQLAMTGLEDSNIVFYAQKDSEDTVQFAFRAGLLTQFEVKKEDGSRGMGCAFIHLTIQEF
FAALHLMTSDSVQEAQLKKKFNLKSRWTTKADPKTVFTDTFHLYVSGLASRECTSFLGQM
SRRGTLQVRKRQEAIVKILRSLAASSLTGPKLIELCRCTFESQDRELARAVGARDRYELR
NFRLAPVDMVALAFVIKEAGRPICLDIAGCSMEPDCLDVLTSCTAIDSLMFRSRKYDDRF
AEALSGILPSLTSLRKLEFVSGNITEVGTLKLAAVLPSCLRLMELNFSENVLTDKGLEEI
ANIFPKFKSLRRVILSNNAYTLDGIFILVKSMCSCLNIEEIRVNGAKEAEVLFSSGSVGL
AGAERSVDRKDVGLCRASRSLSLLNYSMTADQLKILCEILTRCPGLSEIELSGNGLQDEG
FMTLCDFLPQLIVSTQITLCNNCISVDGIGYLSRSLALCPRVVLVDVSLQTPSKVIVRFA
GELQGPEQVPGDDVTQPHATEENRISKTFRLTNCGIQPQQLDKLLEPLRSCSSLEILDLS
GNALGNGGLKKLTEALPGLRGLQEVIASDNAVTLDGVLCLADSLRTCRTMCAVDVSAGGS
KRLVMEFRRSTSRASGVLSEEAAPPENGLSQGRRLSVHNSDIQPAIMEELCGRLTRCPGL
SELDFSDNVLDEASIEKLVKHLPQMRWLKVLKVGNAVLSGDGALLLVRSLANCERVRAVE
LRPQGNAFIQFVKGKVEQTTCRLSEYALSGKHMEELAAVLERCPHLAEVE
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcaaccgaattgagctcgctcggagagcagccctgaagatgtttaggctatct
ctagccccgcggccacaaggtgaaggagcagaacgcaacagcaagttaaaggcagttctg
cactggccgtgctttaaacaggccgcggcgatggaggaggtaggcgcggcggacgcggcg
gcggagctggcgcaggtgggcccgcagctggtggaggtgctggtcgggcagcccgaggac
gtgctggcgcaggtcagcggcctgctggggcgcgacgagcaggaggagctgcgccgcctg
gccgaccgcgggcagcgggtctcacggctggtggagctgttcgaggggaagggcggcgcc
gcgtgccgccggctcttccatgccgtgtgcctgctgtgcaccgacctgcccatgcagctg
gacacgcgcctgatgtccgcggccggagacttctctgaacatcccagtgaaaacgagcaa
agaaacgagatcagccctgctccacacaacccagacagccagaggcgccgcgcagcagca
gatctcccgccagcaccgctcagccaggggaaacggccttgtgtcgactttgcagagagt
tatgaagctgccatgaagaagctgctgctcctggacgggagagcctctcagggaatcccc
cattccctgggcctggaggagtcgcccctgatcgtggtccaaaagaactcggcgaagctg
agggacagagcggaccgcacgtggggggacgtgccggcgccccaggacccggaggacagc
gtggactacgtggacatagcggacctgctgaagccccccgccaccgccgcatcgcgggtc
accgtcctgcggggcgcagctgggacaggcaagacgcggctggtccgcgacctcgctcgc
cgctgggcgcggggggcgctggccccgttccagttcctcttcctgttcgagttccggcag
ctcaatctcatccggaggccgctgtcgctccggcagctgctgttcgacttcttcctgccg
ccggaggagggggcgggagacgccgtcctggcctccgtcctggccaggccccagcgggtg
tgcgtcatcttcgacggctacgacgagttccgctgcaggttcgcggcgccgggcccgggg
cggggcctgcgccccgaggagccattgcctgtggccgagctcttctccagcctgtactgc
gggcgcctgctgcgaggctgcacgctgctggtgacctgcagacccaaggacgtgccggac
ctgccgctccgtgcggtggacgaggtgggagaggtgctggggttcgactatcgcagggtg
gaggagtacgccaggaggtatttcgagcacagccccctcagggaccaggccgtgggcagc
ctcctgagcaacaggaacattcgcaacatgtgctgcgtgccggccctgtgcttcatcagc
tgcgtctgcctggagttcctgctggagaaggggcccggcctgcccaagctacctcacacc
atgacccagttctacatccagatcctctgcgctttcctcagcaagatgcaggccggctgt
agctccggggacccgtcgtcgccactgctgcagcagtaccggaccaagatcgaggccctg
agccagctggccatgacggggctggaggacagtaacatcgtgttttacgcccagaaagac
tctgaagacacggtgcagtttgcgttccgggccgggctcctgacccagttcgaggtcaag
aaggaggacggatcccgagggatgggctgtgccttcatccacctgaccatccaggagttt
ttcgctgccctgcacctgatgaccagcgacagcgtccaggaggcccagctgaagaagaag
ttcaacctcaagtccaggtggaccaccaaggccgaccccaagacggtgttcacagacacc
ttccacctgtacgtgtccgggctggcctccagggagtgcacctccttcctggggcagatg
tccaggcgtggcacactgcaggtccggaagagacaggaagccatcgtgaagatcctcagg
tccctggcggccagcagcctgacggggcccaagctcatcgagctgtgccgctgcacgttc
gagagccaggacagggagctggccagggccgtgggggcacgagacagatacgagctgagg
aacttccggctcgcccctgtggacatggtcgcgctggcctttgttatcaaggaggccggg
agacccatctgcctggacattgctggatgctccatggagccggattgcctggatgttctg
accagctgtactgccatagactcgctcatgtttcggagccgaaaatacgacgacagattt
gccgaagccttgtcaggaattctcccgagccttacgtctctgaggaaactggagttcgtc
agcgggaacatcaccgaggtggggaccctgaagctggccgcagtgctgcccagctgtctg
cgcctgatggagctgaatttcagtgaaaatgtcctgactgacaagggtctggaagaaatc
gcgaacattttcccaaagttcaaatccctcaggagagtgattttaagcaacaatgcctat
acactggatgggatcttcatactagtgaaatcaatgtgctcgtgtttaaacattgaagaa
atacgtgtcaatggagcgaaggaggcagaagtcctcttttccagtggatcggtggggctt
gcaggcgcagagaggtccgtggacaggaaagacgtcggtctctgtcgcgccagtcgttca
ctcagccttctgaactacagcatgacagccgaccagctgaaaatactgtgtgaaatcctg
accagatgcccagggctttctgaaattgagctatctgggaacggactgcaagacgaaggg
ttcatgacgctgtgcgacttcctgcctcagcttattgtttctacacagatcaccctctgc
aacaactgcatctctgtggatgggataggctatctgtcccgctcgctggcgctgtgcccc
agggtggtccttgtggacgtcagcctccagacacccagcaaggtgatcgtaaggtttgcg
ggagagctacagggaccagaacaagttcctggggatgatgtcacccagccccatgccaca
gaggaaaatcggatatctaagacattcaggctgacaaactgcggcatccagccccagcag
ctggacaagctcctggaacccctgaggagctgcagcagcctggagatcttggacttgtct
ggaaacgcgctggggaacggaggtctgaagaagctgactgaggccctgcctggcctgcga
gggctccaggaagtcattgccagcgataacgcggtgacgctggacggcgtgctctgtctg
gctgactcactccgcacctgcaggaccatgtgtgcggtcgacgtcagtgctgggggtagc
aagaggctggtgatggagtttcgcaggagtacaagcagagccagcggtgtcctctctgag
gaggcggccccaccggagaacggactgagccagggcaggagactgagtgtccacaacagc
gacattcagcctgcgatcatggaggagctgtgtgggcgcctgacgcgatgtccaggctta
tcggagctggacttttctgacaatgtccttgatgaggcgtccatcgagaagcttgtgaag
cacctgcctcagatgcgctggctgaaagtgctgaaggtgggtaacgcagtgctgtcagga
gacggggctctgctgctggtcaggagccttgctaactgtgagagagtccgagctgtggag
ctgagaccccagggaaacgccttcattcagtttgtcaagggaaaagtggaacaaacgacc
tgcaggttgagtgagtatgccctcagcggaaagcacatggaggagctggcagcggtgctg
gagagatgtccccatctggcagaagtagagtaa
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