Lepisosteus oculatus (spotted gar): 102690787
Help
Entry
102690787 CDS
T07349
Symbol
utp15
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
102690787 (utp15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
loc03009
]
102690787 (utp15)
Ribosome biogenesis [BR:
loc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
102690787 (utp15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_IFT122_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_IFT122_2nd
Beta-prop_HPS5
WD40_like
Beta-prop_LRRK2
KNTC1_N
Beta-prop_NWD2_C
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
102690787
NCBI-ProteinID:
XP_006627225
Ensembl:
ENSLOCG00000011049
UniProt:
W5MYW0
LinkDB
All DBs
Position
LG2:complement(45052387..45066089)
Genome browser
AA seq
505 aa
AA seq
DB search
MSSFKPTRIQSYPKLGEKVTQDTLYWKNYKTPVQIKEFGAITRIDFSPQSPYNYAVTAST
RIHIYGQYSQEPIKTFSRFKDTAYSGTYRSDGQLLVAGSEDSVVRLFDISGRVALRQFSG
HSKSVHVTDFTSDKFRILSGSDDYTCRLWDIPNSTELISYKEHTDYVRCGTTSKLNPDLF
ITGSYDHTVKVFDARTNKSVMTMDHSQPVESVLLFPSGGLLVSAGGRYVKVWDMLKGGQQ
LVSLKNHHKTVTCLCLSSSGQRLLSGSLDRHVKVYSTATYKAVHSFDYAASVLSVALAPE
DEAIVVGMTNGVLNVKHRKHPEEKQEAASRKRRRPAYRFFVKGKNYMPKQDDFLVSKPVK
MHLKKYDQQLKSFQVSKALDTVLERRVHIKRPEVTVAVIQELNRRGTLKNALAGRDEKSL
TNLLNFLIRYMVDPRFTPVLVDAAEMVLEIYRHVVGQSALIDKQFVRLQETIEKEIDYQE
ELVEVLGMIDTLVAATTTRKEAATS
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcttttaaacctacacgaattcaatcctaccccaagcttggagagaaagtcacc
caagacacgttatattggaagaattataagactccagttcagataaaggaatttggggca
attacaaggatagatttctctcctcagtccccatacaattatgctgtcacagcatctaca
agaatccacatttacgggcagtactcacaggagcctatcaaaaccttctcgcggtttaaa
gacacagcctacagtggtacataccgatcagatgggcagctgcttgtggcagggagtgaa
gactcggtagtgagactctttgatatcagtggcagagtcgcactcaggcagttttctggg
cactccaagtcagttcacgtaacagacttcacatcagacaagtttagaatattatcagga
tcagatgactacacctgccgattgtgggacataccaaactcaacagaactgatctcctac
aaggaacatactgactatgtgcgctgtgggacaacaagtaaactgaacccagaccttttt
atcacaggttcttacgatcacacggtgaaggtgtttgatgcacggaccaacaagagtgtc
atgaccatggatcacagtcagccagtagagagtgtcttactcttcccctctgggggcctg
ctggtatcggcaggtgggcgatatgtaaaggtctgggacatgctgaaaggaggacagcag
cttgtctcattgaagaatcatcataaaacagtaacctgcctgtgcctgagctcctcagga
cagaggctgctctcgggatcactggacaggcatgtgaaagtgtacagcacagcaacctac
aaagcagtgcacagctttgactatgctgcttctgttctgagcgttgccctggcacctgaa
gatgaagcgattgttgttgggatgaccaatggagtgttgaatgtgaaacacaggaagcac
ccagaggagaaacaggaagcagccagtcggaagaggcgacggccagcatatcgtttcttt
gtcaaggggaaaaattacatgccaaagcaggatgatttcttggtcagcaaaccagtcaaa
atgcacttgaaaaagtatgaccagcaactgaagagcttccaggtttcaaaggctcttgac
actgttttggagcgaagggttcatataaagagaccagaggtaactgtggcggtgattcag
gagctgaaccgcagaggcactctgaaaaatgccctcgcgggccgagatgagaaaagcctt
acaaacctactcaacttcttgatcaggtatatggttgatccaaggtttaccccagtttta
gtggatgccgcagaaatggttttggaaatttacaggcatgttgtggggcagtcagcactg
atagacaaacagttcgtgaggctgcaggagacaatagagaaagagattgactaccaggag
gaactggtggaagtcctgggaatgattgacaccctcgttgcagcaacaaccaccaggaaa
gaggcagcaacctcctga
DBGET
integrated database retrieval system
