Lepisosteus oculatus (spotted gar): 102690811
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Entry
102690811 CDS
T07349
Symbol
brwd3
Name
(RefSeq) bromodomain and WD repeat-containing protein 3 isoform X1
KO
K11798
bromodomain and WD repeat domain containing protein 1/3
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
loc04121
]
102690811 (brwd3)
Ubiquitin system [BR:
loc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
102690811 (brwd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Bromodomain
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
Beta-prop_HPS5
NBCH_WD40
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
102690811
NCBI-ProteinID:
XP_015207155
Ensembl:
ENSLOCG00000014998
LinkDB
All DBs
Position
LG7:complement(45055972..45092347)
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AA seq
1891 aa
AA seq
DB search
MLPNRSRWVSPSVSFQFVSLFARKRRCCRPPCEGFARVNGFLILSPPLLLLLLLFRTVLP
HRQVSAVRTVQEIGPGKAGVQNRDPPTHLSAFSLGSAVLRKSCVFLLQVLVEELEEFELI
PRRWSWDGKQYKRNFEDWVKLNRHIPTDYLLRICQRFGPLLDKEVPPSVPGVHTLLGVGR
QSLLRTAKGCSHTVWSGSAFAALHRGRPPEPPLIYGRPPSIVTIMGARRTTGSARFSHTL
PFSTYQHMKMHRRILGHLSSVYCVAFDRTGRRIFTGSDDCLVKVWATDNGRLLSTLRGHS
AEISDMAVNYENTMIASASCDKVIRVWCLRTCAPVTVLQGHAASITSIQFSPAARGTARY
LTSTGADGTVCFWQWHSVTMKFAERPFKFTERSRPGAQISCSSFSCGGMFLATGSTDHVI
RVYYLGLDPPIKMAELESHTDKVVAVQFCNNSDSLRFVSGSRDGTARVWHYQQQEWKSIT
LDMTAKLPGSSAVPGEDKVTKLNVTMVAWDRGDSTVITAVNNYLLKVWRSTTGQLLHVLS
GHDDEVYVLEPHPFDSRIMLSAGHDGNIYVWDLTKGLKIRNYFNMIEGQGHGAVFDCKFS
PDGQHFACTDSHGHLLIFGFGCSRPYEKIPDQMFFHTDFRPLIRDSNNYVLDEQTQQAPH
LMPPPFLVDVDGNPHPPRYQRLVPGRESCKEEQLIPQLGYLANGDGEVVEQVIGQQTLGE
ELEESPLDGLIRQLQRQQDQNLNSAEEGGEQQDSQPGVRAAEGLGSPPNVGLRRSGQVEG
VRQMHHNAPRSQMATERDLMAWSRRVVVNEIQPGVGRYDRPPLDRPRVMEECRLAKGEVE
CALYNAERRKKPAHAAQRSEQQESGTRSLRRTRRKQQHAYQTRSARERPQQDRARGAQSE
EESDLEDEQEEEQPDPSEPSSGEGEAEWQTDSSSSESSSEYSDWTADAGINLQPPKRLTR
RPVRHLGSSSSEDEAGGATEEGGATDERRRRRRRRQAEKRKQLKQTKRKKPHSSLAVAGE
AAEEWLPPPWIMDTIPRRSPFVPQMGDELIYFRQGHEAYVRAVRKAKSYSINPQKQPWNK
LELRDQESVKVVGIKYEVGPPTLCCLKLAFLDPISGKMTGESFSLKYHDMPDVIDFLVLQ
QFYNEAKERNWQPGVGFRSIIDDAWWFGSVESQQPFQPEYPDSLFQCYAVRWDNGEREKM
SPWDMEPIPDQASFPEEVGDGVPVTEEELKSLLYKPQEGEWGAHTRDEECERVIQGIDEL
LTLDIAKAFCSPVDLRDYPLYCTVVAYPTDLSTVRKRLENHFYRRISALMWEVRYIEHNA
RTFNEPESPIVAAAKIVTDVLLRFIGDQSCTDILDLYNKVKTEEMSSAVEEEEEAEVDVD
SDTPGTSTGRRRAQPSPKRRGVPLDVGAWRQQCRDLVTRMLECEDSEPFRQPVDLFAYPD
YRDIIDTPMDLGTVSETLHAGNYENPMEFSKDVRLIFSNSKAYTPNKKSRIYSMTLSLSA
FFEAQILSIISDYKSAVQNQRRSRQRLSYRKRLRSTSSSPSTSRASSPKGKHKQGKSQPK
STPNTSLCLTRVSSRRSSQASELTEGTASVVEEDEGDSQPSSSGSVAGGRRTAPGADRVT
RSRVTPAKTDALANGPLTNGGGRSLSAAARRRLGLGPEEGEASDSERRGSSSSSSSSSSS
SSPSSSSSDSEGTRNSSSNNHKNNNNSSSSSSSGSGSGGGSSSGSGSGSESERDFVDGGD
HDYSKAARLCPPRKGKGKARTTTAAAAAGPRKRRRRKVGRPPKRGRPKRARLEEEEEEEE
EEEEGAQVQRPQQQEGPGRTQGQGARRPAPGKASRINTRNQGRRTVLYNDDSEDDALAPP
EDPLNLGMSRSGRVRRMTEKARVSHLMGWNH
NT seq
5676 nt
NT seq
+upstream
nt +downstream
nt
atgctcccaaatcgaagccggtgggtgtcgccgagcgtttcttttcaatttgtttcttta
ttcgcccgaaagcggagatgctgccgtccgccgtgcgaggggtttgcgcgagtaaatggc
tttttaatactctccccccctcttctcctcctcctcctcctcttcagaactgtattacct
catcgccaggtttctgcagtccggaccgtgcaagaaatcggcccaggtaaggccggcgtg
cagaaccgcgatccgccgacacatctctctgccttttctctcgggtctgcggtgctgaga
aagtcctgtgtgtttctcctccaggtcctggtggaggaactggaagagttcgagctcatt
cccagacgatggagctgggacgggaagcaatataaaagaaactttgaagactgggtgaag
ctcaatcggcacatccccacggactacctgctgcgcatctgccagcggtttgggccgctc
ctggacaaggaggtaccccccagcgtcccgggggtgcacaccctgctgggggtcggcagg
cagtcccttctgcgcactgccaaagggtgcagtcacacagtatggagtggttcagccttt
gctgctctgcaccgggggagacccccagaaccccccctgatttatgggagaccgcccagc
atcgtcaccatcatgggcgcccggcggaccaccggctccgcccggttcagccacaccctc
cccttctccacctatcagcacatgaagatgcaccgccgcatcctggggcacctgtcgtcg
gtgtactgcgtggcctttgaccgtaccgggcgccgcatcttcacgggctcggacgactgc
ctggtgaaggtctgggcgacggacaacgggcggctcctctccaccctgcggggccactcg
gccgagatctcggacatggccgtcaactacgagaacaccatgatcgcctcggccagctgc
gacaaggtgatccgggtgtggtgcctgcggacctgcgcgcccgtcaccgtgctgcagggc
cacgccgcctccatcacctccatacagttctctccggccgcgaggggcacggcgcggtac
ctcacctccaccggcgccgacggcacggtgtgcttctggcagtggcactccgtgacgatg
aagttcgcggaacggcccttcaaattcacggagcgctcgcggccgggggcgcagatctcc
tgctcttccttcagctgcggtgggatgtttctggccactggaagcaccgatcacgtgatc
agggtgtactacctgggcttggacccacccataaagatggccgagctggagtcacacacg
gataaagtcgttgcagttcagttttgcaacaacagcgacagcctgcggttcgtcagcggg
agccgggacggcacggccagagtctggcattaccagcagcaggagtggaagagcatcacc
ctggacatgacggccaagctcccagggagcagcgcggtccccggggaggacaaggtgacc
aagctgaacgtgaccatggtggcctgggaccgaggggacagcacggtcatcacggccgtc
aacaactacctgctcaaagtgtggcgctccaccactggccagctgctgcacgtcctctcg
ggtcacgatgacgaggtgtatgtgctggagccccaccccttcgactccaggatcatgctg
tcggccgggcacgacggcaacatctacgtctgggacctgacgaagggcctcaagatccgc
aactacttcaacatgatcgagggtcaggggcacggcgcggtgttcgactgcaagttctct
ccagacgggcagcacttcgcctgcacggactcccacggacacctgctcatcttcgggttt
gggtgcagcagaccctatgagaagattcctgatcagatgtttttccacacggatttccgc
ccgctgatccgggactccaacaattacgtgctggacgagcagacgcaacaggcaccccac
ctcatgcctccccccttcctggtggatgtggacgggaacccccaccccccccgctatcag
cgcctagtgcctgggagggagagctgcaaggaggagcagctgatcccacagctgggctac
ctggccaacggagacggggaggtggtggagcaggtgattggccagcagactctgggggag
gagctggaggagagccccctggacgggctgatcaggcagctgcagcgccagcaggatcag
aacctgaactcggcggaggagggcggagagcagcaggacagccagcccggagtgcgtgcc
gcggagggcctgggctcccccccgaacgtgggtctgcgccgcagcgggcaggtggaggga
gtgcggcagatgcaccacaacgcgccgcgcagccagatggccaccgagcgagacctgatg
gcctggagccggcgcgtcgtggtcaacgagatccagcctggcgtcggcaggtacgaccgg
ccccccctggacagaccaagggtgatggaggagtgcaggctggcgaagggcgaggtggag
tgcgcgctgtacaacgcggagaggaggaagaagcccgcccacgccgcacagaggagcgag
cagcaggagtccggcacgcgctccctgcgcaggacgaggcggaagcagcagcatgcttac
cagacccgctcggccagagagcgcccccagcaggaccgcgcacgcggcgcgcagagcgag
gaggagtccgaccttgaggacgagcaggaggaggagcagcctgaccccagcgagccgtcc
tcgggagagggagaggcagagtggcagaccgatagcagctccagcgagtcctccagcgag
tactccgattggacggcggatgcggggatcaacctccagcccccgaagcggctcacccgt
cggcccgtgaggcacctgggaagcagctcctccgaggacgaggcggggggggccaccgag
gagggcggggccaccgacgagaggaggaggaggaggaggaggaggcaggccgagaaacga
aagcagctcaaacagacgaaacggaagaagccccactcgtcactggcggtggcaggggag
gccgcagaggagtggctgcctccaccctggatcatggacaccatcccacgccgctcgccc
ttcgtgccgcagatgggggatgagctcatatattttcgccagggccacgaggcctatgtg
agagctgtccgcaaggccaagtcctacagcatcaacccgcagaaacagccctggaacaag
ctggagctgagggaccaggagtccgtgaaggtggtggggatcaagtacgaggttgggccg
cccacgctgtgctgcctgaagttggccttcctggaccccatttctgggaagatgaccggg
gagtccttctctctgaagtatcacgacatgccggatgtcatcgacttcctggtcctgcag
cagttttataacgaggccaaggagcgaaactggcagcctggcgtggggttccgcagtatt
attgatgatgcctggtggttcgggtcagtggagagccagcagcccttccagccggagtat
cctgacagcctgttccagtgctacgctgtacggtgggataatggagaaagggagaagatg
agcccctgggatatggaacccattcccgatcaagcctcgttcccagaggaggtcggcgac
ggggtgccggtgacggaggaggagctgaagtccctgctctacaagccccaggaaggggag
tggggagctcacacacgggacgaggagtgcgagagggtcatccagggcatcgacgagctg
ctcactctggacatcgccaaggccttctgctctcctgtggacctgcgggactaccccctg
tactgcacagtggtggcctaccccacggacctcagcaccgtccgcaagagactggagaac
cacttctacaggcggatctcggccctgatgtgggaggtgcgctacatcgagcacaacgcc
cgcaccttcaacgagccggagagccccatcgtcgccgccgccaagatcgtgaccgatgtg
ctgctgcgcttcatcggggaccagagctgcaccgacatcctggatctctacaacaaggtg
aagacggaggagatgagcagcgcagtggaggaagaggaggaggcagaggtggacgtggac
tcggacacccctgggacctccactgggcgccggcgggcccagccctctccaaagcggcgc
ggcgtgcccctggacgtgggggcgtggcgccagcagtgccgggatctagtgacccgcatg
ctggagtgcgaggactccgagccgttccgccagcctgttgacctcttcgcttatccggat
taccgggatatcatcgatacgccgatggatctgggaacggtttccgagaccctgcatgct
ggaaattacgagaaccccatggagttttccaaggatgtccgactgatcttcagcaactcc
aaggcttacacccccaacaagaaatcccggatctacagcatgacgctcagcctgtcggcc
ttctttgaagctcagatcctgtccatcatctcggactacaagtccgcggtgcagaaccag
cggcgcagtcggcagcggctgagctaccgcaagcggctgcgcagcaccagcagctccccc
tccaccagccgcgcctccagcccgaaagggaagcacaagcaaggaaagtctcagcctaaa
tcaaccccgaatacctcattgtgtctgaccagggtcagctctcgaaggtcatctcaagcc
tcggagctgacggaaggcaccgcgtccgtggtggaggaggacgagggagacagccagcct
tcctcctcgggctccgtcgcggggggccggcggacggcccccggggccgacagggtgacc
cggagccgagtcacgccagccaagacagacgccttggccaacgggccgctcaccaacggc
ggggggcgctctctgagcgcggcggccaggaggaggctgggcctggggccagaggagggc
gaggcgtcggatagcgagagacggggctccagctcctcctcttcctcctcgtcctcttcc
tcctcgccgtcctcctcttcctcggacagcgagggcacccggaacagcagcagcaacaac
cacaaaaacaataacaacagcagcagcagcagcagcagtggcagtggcagtggcggcggc
agcagctcgggctccggctccgggtccgagtcggagcgggatttcgtggacgggggggat
cacgactacagcaaggcggcccgcttgtgcccgccccgcaagggcaagggcaaggccagg
accaccaccgccgccgccgccgccggccccaggaaacgccggcgcaggaaggtcgggcgc
ccgccgaagagggggcggccgaagcgtgccaggctcgaggaagaggaggaggaggaggag
gaggaggaagagggggcgcaggtgcagcggccgcagcagcaggaggggccgggcaggacg
cagggccagggggccaggcgccccgcgcccggcaaggcgtcccgcatcaacacccggaac
cagggccgcaggacggtgctgtacaacgacgactcggaggacgacgccctggcgcccccc
gaggaccccctcaacctgggcatgtcgcggtcggggcgggtgcggcggatgacggagaag
gcgcgcgtcagccacctgatggggtggaaccactga
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integrated database retrieval system
