Lepisosteus oculatus (spotted gar): 102690825
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Entry
102690825 CDS
T07349
Symbol
lrrc7
Name
(RefSeq) leucine-rich repeat-containing protein 7 isoform X1
KO
K24055
leucine-rich repeat-containing protein 7
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
loc04990
]
102690825 (lrrc7)
Domain-containing proteins not elsewhere classified [BR:
loc04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
102690825 (lrrc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_14
LRR_8
LRR_4
PDZ
LRR_LRWD1
PDZ_6
LRR_13
LRR_EndoS
LRR_NXF1-5
PDZ_2
LRR_5
LRR_9
LRR_At5g56370
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
102690825
NCBI-ProteinID:
XP_015212046
Ensembl:
ENSLOCG00000009583
LinkDB
All DBs
Position
LG10:22895869..23197772
Genome browser
AA seq
1561 aa
AA seq
DB search
MDNYSTLQLQCLEMTTKRKIIGRLVPCRCFRGEEEVISVLDYSHCSLQQVPKEIFSFERT
LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGIQEF
PDNIKCCKCLTVVEASVNPITKLPDGFTQLLNLTQLFLNDAFLEYLPANFGRLTKLRILE
LRENHLKTLPKSIHRLTQLERLDLGSNEFSELPEVLEQIQNLKEMWMDNNSLQTLPGSIG
KLKQLTYLDMSKNRIETIDMEISGCECLEDLLLSSNMLQQLPDSIGMLKRLTTLKVDDNQ
LTSLPNTIGSGRGKLGLSLLEEFDCSCNELESLPPTIGYLHNLRTFTADENFLTELPREI
GSCKNVTVMSLRSNKLEFLPEEIGQMTKLRVLNLSDNRLKNLPFTFTKLKDLAALWLSDN
QSKALIPLQTEAHPETKQRVLTNYMFPQQPRHDEDYQSDSDSFNPTLWEEQRQQRMTVAF
EFEDKKEEEDNSGKVKVEINLKRYPTPYPEDLKNMVKSVQNLVGKTTHALSTEKCTSGTN
MDHHGKDKYEPKWPITTKEVTVEVTEREAKDFQKTQMAEQSTIHNSAMEITKRKEKEELT
ESSEISLHRVVPKLQQPENTALSLTASCFCLIDSLGGSPNDIRISDMRPTLVEPALYKPK
VVLIGKDKKESTDESDADKMHCLNNSGSSATYSDYSPSQGSSGSSNPPGNVGTLQPVTKD
GAPPSHWTNRLAQSFPQPIETKPLLSQRDTPPSSTLQQRNERHALSDTFDSWNDSTHYDN
TGFVAEEQPIENPSTNPMLGSKTRSVSTHGRRPLLRQERIVGVPLELEQPSSHTFHSVRN
TPETEVPPPNPWQNWTRTPSPFEDRTAFPSKLEITPASSPAPDRKDFEQEMSELPGTFPS
TGAWGFLDSRDSGTARNSSSNVFTHIHCRQDPAKGAIVISKSTERLSPMMKEVKAKFKKS
QSIDEIDIGSYKVYSIPLENYSSSMENQGSMDKQELPPPPEQSMSRSQSAPMLDDDLDGY
GTGKGSQQQKPVIPKKVYHFDQSFNPQGAVEVVKPERRIPPPFPNNPEYMSQQNKNIPKE
LVSPRGYRGYPPMEHMFSFSQPSVNEDVIGQQFPSQRSRFLRRADSLVSSTEMALFRRVA
EAQELPLTDRYNRTHFKGMLEHQNSLSTMVESQFHKRNGRYEDEYSSYQEPKKSATGFPA
KNLTQRRPLSARSYSTESYGASQARPVSARPTMAALLEKVPSDYNISSCTEKNAESELKM
RPIPVKGDESSSKMPVDWRQQLLRHIEAKRLDRNAVKHNTVNIGMLYSGRYSAAHANRSI
TLNFYNNSKHEKQWLPPHTPSQQSNILDNGQEDMSPTSQWAPYSLGRRDVPPENIIKKLP
DSLPNGLNYPQAGSHPLQTQTMIVTSSTATPPHRSARDQQYEGAINKISIQQYQSPLPVP
ISTTSPRGPPSGRCLIQTKGQKSMDGYQEQFCVRIEKNPGLGFSISGGISGQGNPFKPSD
MGIFVTRVQPDGPASNVLQPGDKILKANGHSFLHMEHERAVSLLKSFQKTVDLEGSLRVE
H
NT seq
4686 nt
NT seq
+upstream
nt +downstream
nt
atggacaattactcaaccctccaattgcagtgtctggaaatgacaaccaagaggaagatc
attggccgcctggtgccctgccgctgtttccgtggtgaggaggaggtcatctccgtgctt
gactactcccactgcagcctccagcaggtgccgaaagagatcttcagcttcgagcgcacg
ctggaggagctctacctggatgccaatcagatcgaggaactgcccaagcaattattcaac
tgtcaagcactgcggaaactgagcatacctgacaatgatctctccaacctgcctaccacc
atagccagccttgtaaacctaaaagagctggacatcagtaaaaatggtattcaagaattc
ccagataatattaaatgctgtaaatgtctaacagttgtggaagccagtgtcaatccaatt
accaagctaccagatggtttcacccagcttctaaacctaacacagctctttttaaatgat
gccttcctggagtatcttcctgcaaactttgggagacttaccaaattacgcattttggaa
ctacgagaaaatcacctgaaaacattaccaaagtcaatacacagactgacacaactggag
aggttagacctgggcagcaatgaattcagtgagctgcctgaagtcctggagcaaatacag
aacctaaaggagatgtggatggataacaactcactgcagacattaccggggtctataggg
aaactgaagcagctgacatacttggatatgtccaagaacaggatagaaaccattgacatg
gagatctctggctgtgaatgcctggaagatctccttctctcctccaacatgctacagcag
ctgcctgactccataggaatgctgaagaggctgacaacactgaaagtagatgacaaccag
ctgacatcactgccaaacaccattggaagtggacgcggcaaattaggtttatcgctttta
gaagagtttgattgcagctgtaatgagcttgaatcccttcctccgacaattggctacctg
cataatctacgaacatttactgctgatgaaaacttccttacagagctgcctagagagatc
ggaagctgtaagaatgtcactgtcatgtctcttcgctccaataaacttgagttcctgcct
gaggagattggacagatgacgaaactgagagttctgaacctgagtgacaacaggttaaag
aatttgcctttcacttttacaaaactaaaggaccttgctgcactctggctatcagacaat
cagtctaaggccctaatcccccttcagacagaggcccacccagagacgaaacagagggtg
ctgacgaactacatgtttcctcagcagccacggcatgatgaagattaccagtcagacagt
gatagtttcaaccctacattgtgggaggagcagagacagcagcgcatgaccgtggccttt
gagttcgaagacaagaaggaggaggaggacaactctgggaaagtgaaggttgaaatcaat
ctgaaacggtatcccaccccctatccagaagacctgaagaacatggtgaagtctgttcag
aacctggtaggcaagaccactcatgctctgagcacggagaagtgcacatctgggaccaac
atggatcaccatggcaaggacaagtatgagcccaagtggcccatcacaacaaaggaggta
acagtcgaggtcacagagagggaggccaaagacttccagaagacacaaatggcagagcaa
agcaccatccacaactcagccatggaaatcacaaaacgcaaggagaaagaggagctgacg
gagagttctgagatttctttacatcgcgtcgtccccaagctgcaacagccagagaatacg
gccctgtcccttacagcttcctgtttctgcctcatagattccttaggaggttccccaaat
gacatacggatttctgacatgcgccccactttggtggagcctgcattgtacaagccaaaa
gttgtactgatcgggaaagacaagaaagagtccactgatgaatctgatgcagataaaatg
cactgcctgaacaacagcggctcctctgcaacctactcggactactctccctcccaaggc
tcatcgggctcctccaacccccctggcaatgttgggaccctgcagcctgtcaccaaggat
ggggcccctccctctcattggactaacaggcttgctcagtcatttcctcaacccattgaa
accaagcctttgctgagccagagggatactcctccttctagcacgttgcagcagcggaac
gaaaggcacgccttgagtgacacctttgacagctggaacgacagcacccattatgataac
acaggctttgtagctgaggagcagcccatagagaaccccagcactaaccccatgcttggc
tccaaaaccaggagtgtgtccactcacggacgcagacctctattgagacaggagaggata
gtgggtgtccccttggagttagagcagccctcctcccacacatttcacagtgtgcggaat
acacctgaaactgaagtgcctcctcctaacccttggcaaaactggacaaggacccctagc
ccctttgaagacaggactgctttcccttccaagttagagatcacccctgccagcagccca
gccccagaccggaaggattttgagcaagagatgagcgagttgccaggcacttttccctcc
actggagcatggggtttccttgattccagagattcgggaacagcacgaaactcctcctcc
aatgtctttacgcacatccactgccgacaggaccccgcaaagggtgccattgtcattagc
aaaagcacagagcggctgtcccccatgatgaaggaagttaaggccaagttcaagaagtca
cagagcattgatgagatcgatatcggctcctacaaggtttacagcatccctctggaaaac
tatagctctagcatggaaaaccaaggcagtatggacaaacaggagcttccaccgccaccg
gagcagagcatgtctcgcagccagtcagctcccatgctagatgatgacctggatggctat
ggcactgggaagggctcccagcagcagaaacctgtgattcccaaaaaggtgtatcacttc
gaccaaagcttcaaccctcagggcgctgtggaggtggtgaagcctgagaggagaatccct
cctccttttcccaacaacccggagtacatgagccagcagaacaaaaacattcccaaggag
ttggtgagtccaaggggttaccggggatatccacccatggagcatatgttttccttctcc
cagccgtcggtcaacgaggatgtcatcggtcagcagttccccagtcagaggtcccgcttc
ctcaggagggcagattctcttgtcagctccacagagatggccctcttccggagggtggcc
gaagctcaggagctcccactcactgaccggtacaataggacacatttcaaaggtatgctg
gagcaccagaacagcttgtccaccatggttgagtcccagttccacaaaaggaatggtagg
tatgaggatgagtactcttcatatcaggagccaaaaaagtctgccacaggtttcccagcc
aagaacttgactcagagacggccgctgtcagccagaagttatagcacggagagctacgga
gcctctcaagcccggcctgtatctgctcggcccaccatggctgctctgctggagaaggtg
ccctctgactacaacatcagctcctgtacagagaagaacgcagaaagtgaattgaaaatg
cgccctatacccgtgaaaggagatgagagctcctcaaaaatgccggtggactggaggcaa
cagcttctcagacacattgaagcaaaaagattggacagaaatgctgttaaacacaacaca
gttaacatcggcatgctgtattctggacgctattctgctgcacatgccaacagaagcata
actttaaacttttacaataactcaaagcatgaaaagcagtggctacctccacatacaccc
tcccagcagagcaacatcctagataatggacaagaggatatgtctcccacgagccaatgg
gccccttattctctaggcagaagagatgtgccaccagaaaatatcatcaagaagctccct
gactctttgcctaacgggttgaattacccacaggcaggtagccatcccctccaaacgcag
accatgatcgtgacctcatccaccgcaacccccccacaccgctctgccagggaccagcag
tacgagggggccatcaacaagatctccatccagcagtaccagtcgccgctgccagtgccc
atctccactaccagcccgcgcggcccgccgagtgggcgctgcctcatacagaccaaaggg
cagaagagtatggatggatatcaagagcagttttgtgtgcggatagaaaagaaccctggt
cttggttttagcatctcgggaggaatcagtgggcagggaaaccccttcaaaccgtcagat
atgggtatctttgttactagggtacagcctgacggacctgcctccaacgtgcttcaacct
ggagataaaatcctaaaggccaacggacatagttttttgcacatggaacatgaaagggct
gtgtctttactgaagagtttccagaaaactgtggacttggaagggtctttgagagttgag
cactga
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integrated database retrieval system
