Lepisosteus oculatus (spotted gar): 102690842
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Entry
102690842 CDS
T07349
Symbol
cdk9
Name
(RefSeq) cyclin-dependent kinase 9
KO
K02211
cyclin-dependent kinase 9 [EC:
2.7.11.22
2.7.11.23
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102690842 (cdk9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
loc01001
]
102690842 (cdk9)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
loc03021
]
102690842 (cdk9)
Enzymes [BR:
loc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
102690842 (cdk9)
2.7.11.23 [RNA-polymerase]-subunit kinase
102690842 (cdk9)
Protein kinases [BR:
loc01001
]
Serine/threonine kinases: CMGC group
CDK family
102690842 (cdk9)
Transcription machinery [BR:
loc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
102690842 (cdk9)
Brd4/P-TEFb complex
102690842 (cdk9)
7SK RNP complex
102690842 (cdk9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
102690842
NCBI-ProteinID:
XP_015222513
Ensembl:
ENSLOCG00000005311
LinkDB
All DBs
Position
LG21:13433712..13439251
Genome browser
AA seq
304 aa
AA seq
DB search
MDSSSAHSQFSFPVFSTSNPSTQYNRYKGSIYLVFDFCEHDLAGLLSNANVKFTLAEIKK
VMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQGNRYTNR
VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSI
TAEVWPAVDKKYELYQKLELPKGQKRKVKDRLKAYVKDPYALDLIDKLLVLDPAQRIDSD
DALNHDFFWSDPMPSDLKNMLSTHNQSMFEYLAPPRRRGHMPQQPANQSRNPATTNQTEF
DRVF
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggacagctccagcgcccactcacagttcagctttccggttttcagcacttccaatccg
tccacccagtacaatcgatacaaaggcagcatctacctggtgtttgacttctgtgaacat
gacttggctgggttactcagtaatgccaacgtcaagtttactttggccgaaatcaaaaaa
gtcatgcagatgttgctaaatggtttatattacattcaccgaaataagattctgcaccgc
gacatgaaggcggccaacgtgctcatcacgagggatggcgtcctgaagctggccgatttc
ggtctggcacgtgcctttagccttgccaaaaacagccaggggaatcgctacaccaatcgg
gtcgtgacgctttggtaccgccccccggagttactgctgggggaaagagactatggcccc
cctattgacctgtggggtgcaggctgcatcatggcagagatgtggacacgtagccctatc
atgcagggcaacacagagcagcaccagctcaccctcatcagccagctctgtggctctatt
acagctgaggtgtggcctgctgttgacaagaagtatgagctttaccagaagctggagctg
cccaagggacagaagaggaaagtgaaagaccggctgaaggcctatgtgaaggacccctat
gctctggacttgatcgacaagctcttggtccttgatccggcccagcggatcgacagcgac
gacgccctcaaccacgatttcttctggtccgaccctatgccctccgacctcaagaacatg
ctctccacgcacaaccagtccatgtttgagtaccttgccccgcccaggagaaggggccac
atgccccagcagcctgccaatcagagcaggaaccctgccaccaccaaccagactgagttt
gaccgggtgttttaa
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