Lepisosteus oculatus (spotted gar): 102690974
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Entry
102690974 CDS
T07349
Symbol
prdm2
Name
(RefSeq) PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc00310
Lysine degradation
loc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
102690974 (prdm2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
loc03000
]
102690974 (prdm2)
03036 Chromosome and associated proteins [BR:
loc03036
]
102690974 (prdm2)
Enzymes [BR:
loc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
102690974 (prdm2)
Transcription factors [BR:
loc03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
102690974 (prdm2)
Chromosome and associated proteins [BR:
loc03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
102690974 (prdm2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_11
zf-C2HE
zf-C2H2_ZNF462_1st
zf-C2H2_8
zf-C2HC_2
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
102690974
NCBI-ProteinID:
XP_015192340
LinkDB
All DBs
Position
LG25:3178717..3211326
Genome browser
AA seq
1665 aa
AA seq
DB search
MRESEDGPKEEDEKPSLASVQPSQQTASPEEPADVEQVPMKEETLLACVPEVLVEEEVED
EGEEEEEEEEEEELGKAPGDALPEDGGQASPRSEAAEAEEPPEAEASPQECEEEERAEKL
PPESPSGSPVSKLDPDPDGDPQESFLFPCLHCERRFTTKQGLERHMHIHISANCQTHTFK
CRYCGKAFGSQINRRRHERRHEARPKKKLGSVSGTASSFSPSLPTESSSPDLVSSSGNFI
IIGAQNGGDLQEPPEAGKQSPAMEAERSVVLDENGEPKEQHPCKYCKKVFGTHTNMRRHQ
RRIHERHLLPKGVRRKGMLPQEAPPQQPAAPPEESPNASPPPVYTPSGDPEDEGDPEEEY
MVDISSNISENLSLYIDGKILSTSAVSTCEVIEVEPGSATLFGLDALIISPDKVTTALRV
ETASCAVKEVPNGGQTTKRRTATPPLLPKIKTEVESELITPSSSASSSSASSTSSVVGGL
YPQATETLAFPKEKTVYLSPKLKQLLQTQDSHKPGLTLFTEAHRLGPPLTSVTTLPAASG
RFKRRTASPPNSPQHSPAMRETGKTEAGASFGLKVPKLESHCSSPAWSLSSRDERDTLSP
QGVDAFKTSPVDWSAGRSGGSSCNQQPLDLSSGVNKRSEGSNKGAGEAVLDLSMHRKPSP
EPEVKGGAAQSLVKKKKPNTSMLEKVLMNEYGGLEVAVEENPGVLGSASALSANDPSLAA
SPAAPSPVSEAPSPGSVVPTALHPSPPSLTPVTMNPPSPSTSTLASPTPPPPVLPTAPSP
LPAPTSPPPLPPSSPTPSSLPVLSPKNSPSPVSSSPGNPSPSPLDPSLGFVDSLPVVVNP
DSGPVDPDVNPPEHSATSAGPAPPADVSISQVEIVPSKVDSLMPSEELSLTSEDPSGTES
DSTVDLPNDLPSITETESPSPSLHLQHSVGLEPSPATVEQNPMESSVGEAAVPEQNVEPE
EHKLALSPLAPPPLDPPVLVASVPNPPLSASSPHPVPPESPPPLALPPSPFSFAIKEETL
EEDKPLEASAIPAADLSSSPPPPPPPGAGDLQTSSDQEEPQQETFCKNFVCNVCDEPFPS
IKELSRHIVGHAEEWPFKCEFCVQLFRDAEALLEHRSTLHGVGRIYVCSTCAKEFAFLCN
LKQHQKDLHPGQDCMHTEVENGKLRPQNYTDPARASLEPSPSTTATETSAEGSTLSSQDN
PEALKAEELEEEEEDDLDDSTEELYTTIKIMASGGGKPKGPDVRLGINQHYPSFKPPPFP
YHNRTPAGSVASATNFTTHNIPQTFSTAIRCTKCGKSFDNMPELHKHILACANASDKKRY
TPKKNPIPLKQIVKPQNGVLSAVMGTNASGQNAFRRMGQPKRLNFSQEPSAKMKLNALNK
KKNQLVQKAISQKNKIAASAKKASSLGQEEQEMHICPHCNREFTYLGSLNKHVAVSCPRK
PPSKKVKKGSSGGLSSQDKNGNLRRRTADSEIKQQGSQAKLGKTRARTSGPTAPAAVPSK
PPPGKVKAAPAQAQAQAQAQARPKRPAPFPAASVTYAKKSRPALKGSPQQQQQPPPPQQP
PAPPPAPSTHPAPRPAVRMQRGGKELPPKKVPEAKLPLPPQPPQPPPPPPKKEERFSVKT
RERVGGPVTRSLQLVSSTAQAEGKTDELSSLESREPQEHVLKLVK
NT seq
4998 nt
NT seq
+upstream
nt +downstream
nt
atgcgggagtccgaggacggtcctaaggaggaggatgaaaagccatccctcgcttcagtg
cagccgtctcagcagacagccagcccggaggagcctgctgacgtcgagcaggtccccatg
aaggaggagaccctgctggcctgtgtccctgaggtgctggtggaggaagaagtagaggat
gaaggagaagaggaggaggaggaggaggaggaagaagaactagggaaagcaccaggagat
gcgctgccggaggacgggggccaggcctcgccgagatcggaggcagcggaagccgaggaa
cctccagaagcagaggcgagcccccaagagtgcgaggaggaggagcgggcagagaaactc
ccgccggaatcgccgtctggatccccagtttctaagctcgaccccgaccccgacggcgac
ccccaggagtccttcctgttcccctgcctgcactgcgagcggcggttcaccaccaagcag
ggcctggaacgccacatgcacatccacatctcggccaactgccagacccacaccttcaag
tgccgctactgcggcaaggccttcggctcgcagatcaaccggaggaggcacgagcggagg
cacgaagccaggcccaagaagaagctgggctcggtctctggcaccgcgtcgtctttcagt
ccctctttgcccacggagagctccagcccggacctcgtctcttcctctggcaacttcatc
atcatcggggcccagaacggcggcgatctccaggagcccccggaggccgggaagcagagc
ccggcgatggaggcggagcgcagcgtggtgctggacgagaacggggagcctaaggagcag
cacccgtgcaagtactgcaagaaggtgttcggcacccacaccaacatgcggcgccaccag
cgcaggattcacgagcgtcaccttctgcccaagggcgtccgcaggaaaggcatgcttcca
caggaggccccaccccagcagccggcggcgccgcctgaagagtcccccaatgccagccct
ccgccagtctacacgccaagcggcgacccggaggacgagggagacccggaggaggagtac
atggtggatatctccagcaatatctcggagaacctgagcctctacattgacgggaagatc
ttgtccaccagtgcggtcagcacctgcgaagtcattgaggtggagcccggctcagccacg
ctgttcggccttgatgccctgataatcagccctgacaaggtcaccactgcccttagagta
gagaccgcaagctgtgcagtgaaggaggttcccaatggtggccagacgacaaagagaagg
actgccaccccacctcttctccccaagatcaaaacagaagtggaatcagaactcatcacg
ccttcttcttcggcctcttcttcctctgcctcatccacttcctctgtggtgggagggttg
taccctcaggccacagaaaccttggctttcccaaaggagaaaacggtttacctttccccc
aagctgaagcagctcctgcagacccaggacagccacaagccaggcttgactctgttcacg
gaggcacacaggctgggcccccctttgacttcggtcaccactttgccagcggcctcgggg
aggttcaagaggaggacggcttcccccccaaattccccccagcacagccctgccatgaga
gaaactgggaagactgaggctggggcctcttttggcctcaaagtgccaaagctggaaagc
cattgcagctcccctgcttggagtctgtcaagcagagatgagagggacaccctgagtccg
caaggcgtagacgctttcaaaacctctcctgttgactggtcagctggacgaagtgggggc
agttcctgcaaccagcagcctttggacctttccagcggagtgaacaaacgaagtgagggt
tcaaacaagggggcaggggaagccgtgctggatctgagcatgcacaggaagccttcaccg
gagcctgaagtaaaaggaggtgcggcgcagtccctggtgaagaagaaaaagcccaacacc
agcatgctggagaaagtgttgatgaatgaatacggaggcctggaagtagcagtggaggaa
aaccccggtgtgctgggcagcgccagtgccctttcggctaacgacccctccctggctgcc
tcccctgccgctccctcccctgtttctgaagcaccgtcgcctgggtctgtagtacctacc
gctcttcacccatcgccaccctcgctgacccccgttaccatgaatcccccgtccccttcc
acatctactttagcctcacccacgcctcctcccccggtgctaccaaccgccccctctccc
ctcccagctcctacttctccaccaccactgccccccagctcccctaccccgtcttccctt
ccagttctgtcccctaaaaactctcccagtccagtgagttcaagtcccgggaatccctca
ccttctccgttagatccctctcttggttttgtagactctctgccagtggtggtgaatccg
gactccgggcctgtagatcccgatgttaatcctccagaacactctgcaacgtcagcaggt
cctgcaccgcctgcagatgtttccataagccaagtagaaattgtcccttccaaagtggat
tccttgatgccctctgaggagctgtcgcttaccagtgaagatccctctggtactgaaagt
gattctacagtcgatcttcccaatgatctccctagcatcacagaaactgaatccccttct
ccatcactgcacttacagcactctgtgggtttagaaccatccccagcaacagttgaacag
aaccctatggaatcttcagtgggtgaggctgcagtaccagaacaaaatgtagagccggag
gagcataagctcgcattgtccccccttgctcctccacccttggacccacctgttcttgta
gcttctgttccaaacccacccctttctgcgagttccccacatcccgtgccaccagagagt
ccacctcctctagctttgcctccttctcccttttcttttgccatcaaagaagaaaccctg
gaggaagacaagcctctggaggcatctgccatccctgctgctgatctctcttcttctcct
cctcctcctcctcctcctggtgctggtgatctacagacgtcctctgatcaggaggagcct
caacaggagactttctgcaagaactttgtgtgtaacgtgtgcgacgagccctttccctcc
ataaaggagctgagtcgccatattgtggggcacgcagaggagtggccgttcaagtgcgag
ttctgtgtccagctcttcagggatgcagaggctctgctggagcaccgttccaccctgcat
ggtgtgggcaggatctatgtgtgttccacatgcgccaaggagtttgcctttctttgcaac
ctgaagcagcaccagaaggacctccatcctggtcaagactgcatgcacacagaagtggag
aacggcaagctgaggccgcaaaactacacggacccagcccgggccagtctggagccatcc
ccctccaccactgccactgagacctctgctgaaggcagcaccctgtcttcgcaagataac
cctgaggctctgaaagcagaagagctggaagaggaagaggaggatgatcttgatgactcc
accgaagagctctacactacaataaagatcatggcttctggagggggcaaacccaaaggc
ccagatgtgcgtctgggcatcaaccaacactacccaagcttcaagccacccccgttcccc
taccacaaccgtacacctgctggctcagtggcctccgccaccaacttcaccactcacaac
atccctcagaccttcagcacggccatccgttgcacaaagtgcggcaaaagctttgacaac
atgcccgagctgcacaagcacatcctggcctgcgcgaatgccagtgacaagaaacgctac
acccccaagaagaaccccatccccctcaagcagattgtgaagccccagaacggagtgttg
tcggcagtgatggggaccaacgcctctgggcagaatgccttccggaggatgggccaaccc
aagaggctcaacttcagccaggagccgtctgccaagatgaagctgaacgctctgaacaag
aagaagaaccagctcgtccagaaggccatctcccagaaaaacaagatagccgccagcgcg
aagaaggcctcgagcctgggccaggaagagcaggagatgcacatctgccctcactgcaac
cgggagttcacctacctgggcagcctcaacaaacacgtggcggtcagctgccctaggaag
cccccttccaagaaggtcaagaaaggcagcagtggcggcctctcctcccaggacaagaat
gggaaccttcgccggcggacggcggactccgaaatcaagcagcagggctcgcaggcaaag
ctggggaagaccagggcccgcacttctgggcctacggcacctgccgccgtgccctccaag
ccgccgcccggcaaagtcaaggcggcccccgcccaggcccaggcccaggcccaggcccag
gcccggcccaagaggcctgcccccttcccggccgcttccgtcacctacgccaagaagagc
aggccggcgctcaaggggagtccccagcagcagcagcagccgccgccgccgcagcagccg
cccgcgcccccgcccgcgccctccacgcaccccgcgccgcgcccggccgtgaggatgcag
cgcgggggaaaggagctgccgcccaagaaggtgccggaagccaagctcccgctgccgccc
cagccgccccagccgccgccgccgccgcccaagaaggaggagcgcttctctgtgaagacg
cgggagagagtcggcgggccggtcacccgcagtttacagctggtcagcagcactgctcaa
gccgaaggcaagactgatgagctgtccagcctggagtccagggagccgcaggaacacgtg
ttaaagttggtgaagtag
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integrated database retrieval system
