Lepisosteus oculatus (spotted gar): 102691218
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Entry
102691218 CDS
T07349
Symbol
exosc4
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102691218 (exosc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loc03019
]
102691218 (exosc4)
Messenger RNA biogenesis [BR:
loc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
102691218 (exosc4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
102691218 (exosc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
102691218
NCBI-ProteinID:
XP_006634290
Ensembl:
ENSLOCG00000008878
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Position
LG9:20036771..20041747
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AA seq
245 aa
AA seq
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MAGLELLSDQGYRLDGRKPSELRKVQARMGVFAQGDGSAYIEQGNTKALAVVYGPHEVRG
SRGKALHDRAVINCQFSMATFSTAERKRRPHGDRKSSEVSQHLKQTFEAAILTQLYPRSQ
IDIYVKILQSDGGNYSASVNAATLAVIDAGIPLRDYVCACSAGFVEDTPLADLCHAEEAG
GGTVLSLALLPQGGQIALLQMDARLHQDHLDTLMEAAMTACRSLSTVLDRVVREHLQEVT
TLTAE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggccgggttagagttgctgtccgatcagggataccggctggatgggaggaagccttcc
gagctccgcaaggtgcaagcccgcatgggggtcttcgcgcaaggcgatgggtctgcctac
atcgagcaggggaacaccaaggcgctcgcggtagtgtacggaccgcatgaggtgcgtggg
tctcgcgggaaggccctccatgaccgcgcggtcatcaactgccagttcagcatggccacc
ttcagcacggcggagaggaagaggaggccgcatggcgaccgcaagtccagtgaggtcagc
cagcacctcaagcagacttttgaggcggccatcctgacacagctgtacccgcgctcacag
atagacatatacgtcaagatcctgcagtcagatggggggaattacagcgccagcgtcaac
gcggccaccctggccgtgatcgacgccggcatccctctgcgcgactacgtgtgcgcctgc
agcgcgggcttcgtggaggacacgcccctggcggacctgtgccacgccgaggaggcgggg
ggcggcacggtgctcagcctggccctgctgccgcagggaggccagatcgccctgctgcag
atggacgcccggctgcaccaggaccacttggacactctgatggaggcagccatgaccgcc
tgcaggagcctgagcacagtgctggacagagtggtcagggagcacctgcaggaggtgacc
acgctgaccgctgagtga
DBGET
integrated database retrieval system