Lepisosteus oculatus (spotted gar): 102691262
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Entry
102691262 CDS
T07349
Symbol
vcp
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04137
Mitophagy - animal
loc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102691262 (vcp)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
102691262 (vcp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loc03019
]
102691262 (vcp)
03009 Ribosome biogenesis [BR:
loc03009
]
102691262 (vcp)
04131 Membrane trafficking [BR:
loc04131
]
102691262 (vcp)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
loc04147
]
102691262 (vcp)
Messenger RNA biogenesis [BR:
loc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
102691262 (vcp)
Ribosome biogenesis [BR:
loc03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
102691262 (vcp)
Membrane trafficking [BR:
loc04131
]
SNARE
SNARE associated proteins
Others
102691262 (vcp)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
102691262 (vcp)
Exosome [BR:
loc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102691262 (vcp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
TIP49
AAA_22
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
TsaE
ResIII
NB-ARC
Sigma54_activat
NACHT
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
102691262
NCBI-ProteinID:
XP_006626794
Ensembl:
ENSLOCG00000006589
UniProt:
W5MHV1
LinkDB
All DBs
Position
LG2:complement(16898908..16912905)
Genome browser
AA seq
806 aa
AA seq
DB search
MASGGESKNDDLSTAILKQKNRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPNITWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKAN
LRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSSNQGG
AGPSQGSAGGSGGNVYNEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgggaggagaatccaaaaatgatgatctttccactgcaattttaaaacagaag
aacagaccaaacaggctgatcgttgatgaatccatcaatgaggataacagtgtggtttcg
ctttctcaggcgaaaatggatgagctgcagctcttcagaggtgacacagtactgctgaag
gggaagaagaggagggaaacagtgtgtatagtgctctctgatgacacctgctctgatgaa
aaagtgcgcatgaacagggttgtgcgcaacaatctgcgagtgaggctgggagacgtcatc
agtatccagccatgcccagacgtgaagtatggcaaacgtattcatgttcttcccatcgat
gacacagtggaagggatcacaggaaatctgtttgaggtttatctcaagccatacttcttg
gaggcataccggcccatcaggaaaggagatattttcctggtaagaggtggaatgcgagct
gtggaattcaaagtggtggagacagaccccagcccttactgtatagtggctcctgacaca
gtgattcactgtgaaggagagcctattaaacgggaggatgaggaagaatctctgaatgaa
gttggttatgatgacattggtggagtgaggaaacagctggcccaaatcaaggagatggtg
gaactccctctcaggcaccctgcactcttcaaggctattggtgtgaagcctccacgtggc
atcttgctctatggaccccctggaactggcaagacactgattgctcgagctgtggcaaat
gaaacaggagctttcttcttcctcattaatggaccagaaattatgagtaaacttgctgga
gagtcagagagcaatctgcgaaaagcatttgaagaagctgagaagaatgcccctgccatt
atcttcattgatgagcttgatgctattgctccaaaaagagagaagacccacggtgaagtt
gagaggcgcattgtctctcagttgctgactctcatggatggtctgaagcagagagcacat
gttattgtcatggctgctaccaacagaccaaacagcattgacccagctctcaggcgattt
ggacgctttgacagagaggtggacattggaattcctgatgccacaggccgactggagatc
cttcagattcacactaagaacatgaaactggctgatgatgttgatcttgaacaggttgcc
aatgagacccatggccatgttggtgctgatttggctgctctttgctcagaagctgctctt
caggctatcagaaagaaaatggacctcattgatcttgaggatgagaccattgatgcagag
gtcatgaactctctggctgtcaccatggatgacttcaggtgggctctgagtcaaagtaat
ccttcagccctgcgagagacagtggtggaagttcccaatatcacctgggaagacattggt
ggtctggaagatgtcaagagagaactgcaggaacttgtacagtatcctgtggaacatcca
gacaagttcttgaagtttggtatgactccgtccaaaggggtgctgttctatgggccacct
ggatgtggtaaaactcttttggcaaaggccattgccaatgagtgtcaggcaaacttcatc
tccatcaaaggaccagagctgctgactatgtggtttggggagtctgaggctaatgttcgt
gagatcttcgacaaggcccgtcaggctgctccctgtgtgttgttctttgatgagctggat
tccattgcgaaggctcgtggtggcaacattggagatggtggtggtgcagctgacagagtt
atcaaccagatcctgaccgagatggatggcatgtccagcaagaagaatgtttttattatt
ggggccacaaacagaccagatatcattgacccagccattctgcgacctgggcgactggac
cagctcatctacatccctctccctgatgagaaatctcgtattgctatcctcaaggctaac
ctcagaaagtctcccatttccaaggatgtggacttggatttcctggctaagatgaccaat
ggcttctccggtgctgacttgacagaaatctgccaacgagcttgcaagctagccatcaga
gagtcaattgaaaatgagatcaggcgggaacgtgagagacagaccaatccctcagctatg
gaggtggaagaagatgaccctgttccagagattcgtaaagaccactttgaggaggccatg
cgctttgctcgccgctcagtcagtgataatgacattcgtaaatacgaaatgtttgcacag
accctgcaacagagccgaggctttggcagcttcagattcccttcaagtaaccagggtggc
gctggcccaagccagggctctgctggtggcagcggtggaaacgtctacaacgaggacaat
gatgatgatctttatggctaa
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