Lepisosteus oculatus (spotted gar): 102691269
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Entry
102691269 CDS
T07349
Symbol
ddx10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
loc03009
]
102691269 (ddx10)
Enzymes [BR:
loc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102691269 (ddx10)
Ribosome biogenesis [BR:
loc03009
]
Eukaryotic type
90S particles
Helicases
102691269 (ddx10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
PAS_11
Motif
Other DBs
NCBI-GeneID:
102691269
NCBI-ProteinID:
XP_015197231
Ensembl:
ENSLOCG00000002074
LinkDB
All DBs
Position
LG3:1717752..1822383
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AA seq
879 aa
AA seq
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MAGETQGKQPAAPKVKAKGGKNKDTQDPVKNFERWKKKYDRKKSRIKRDKRPKKPEWQIE
REHINKLVKKYEEINLKEAVKFSDFPLSKKTVKGLLEAQYRLPTEIQRQTIGLALQGRDV
LGAAKTGSGKTLAFLIPVLECLFRQQWTAEDGLGALIISPTRELAYQTFEVLRKVGKNHE
FSAGLIIGGKDLKHESERIHRTNIIVCTPGRLLQHMDETTAFHASSLQILVLDEADRILD
MGFADTLNAIVENLPQTRQTLLFSATQTKSVKDLARLSLRDPQYVWVHEKAKFSTPATLE
QNYVVCELHQKVNMLFSFLKSHLSKKIIVFFACCKEVQYLFRVFCRLRPGIPVLALHGKQ
QQMKRMEVYNDFIRKRSAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRVGRTARY
CLPDDLLALLVLLPSEEPGMIQQLQERKVPINQIQVNPEKLINVQQKLQAFLAQETEQKE
RAQRCFVSYLRSIYLMKNKDVFDVFALQLSEYALSLGLAVAPRVRFLNKAKKDREGDLAG
LSTHPNSREEDESSTEEELESFRAQLRGQSPTGDRGVPSARGGVSQHTVPGPAGGPRGQG
EEDSADTEQGETAEASELMFSADADEEDDLRDLDLLTVKRKDVFALEADTQEEDLSKKPP
KKKTEKETKFKEAKKVLKRNFRINTKKTFTEDGEVVQQWPPAQKTAVPHDDEDDETLGIN
VDKARQRLLEEDKLDKEEYRRKVKEKHKEKRLKEKAAKREASKRQKEGPEEEVVACLDSG
ESEEEEFDPGTLPDPDRSRDSELEQDSASEPEQSRTPARKRPQKRKCSSSSSEAGGGEAR
LGWKKPKSRGDLGVLKPLDTGLTLGEDEQLVLHLLSSRS
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggccggggaaactcaggggaaacaaccggctgctcccaaagtgaaggcaaaggggggt
aaaaacaaggacacgcaggatcccgtgaagaacttcgagcggtggaagaagaaatatgac
aggaagaaaagtcgcattaaacgggataagagacccaagaaaccggagtggcagattgag
agagagcacatcaataaactggttaaaaagtacgaagagatcaatctcaaagaggctgtg
aaattttcagatttccctctgtcaaagaagaccgtgaaaggtctgttagaagctcagtat
cggctgcccacggaaattcagagacaaaccattggcttggcgctgcaaggaagagacgtg
ctgggcgcagcaaagacgggctctggcaaaactctggccttcctcatccccgtgctggag
tgcttgttccgccagcagtggacagcggaggacgggctgggcgccctcatcatctccccc
accagagagctggcctaccagacctttgaggtcctgcgcaaagtggggaagaaccatgag
ttttcagcggggctcattattggaggaaaggacctgaagcacgagtccgagaggatccat
cgcaccaacattatcgtctgcaccccagggcgcctgctgcagcacatggacgaaaccacg
gccttccacgcttccagcctgcagatcctggttttggatgaagccgatcggatcctggac
atgggatttgctgacacgttgaatgccatcgtggagaacctccctcagacccggcagacc
ctgctcttctctgccacgcagaccaagtctgtgaaagacctggcccggctcagcctcaga
gacccacagtacgtgtgggtgcatgagaaggccaaattcagcactcccgcgacactggag
cagaattacgtcgtctgtgagctgcaccagaaagtcaacatgctcttctccttcctgaag
agccacctgagcaagaagatcatcgtcttttttgcctgctgcaaggaggtgcagtacctg
ttccgggtgttctgccggctgcgcccggggatcccggtgctggccctgcacggcaagcag
cagcagatgaagaggatggaggtttacaacgacttcatccgcaagaggtccgctgtcctc
ttcgccacggacatcgctgcgcgaggcctcgatttccctgccgtcaactgggtgctgcag
ttcgactgtccggaggatgccaacacctacatccaccgagtgggcagaacggccaggtac
tgcctgcctgatgatctcttagccctgctggtcctcttgccttcagaggagccgggaatg
atacagcagcttcaggaacgaaaagtccccattaaccagatccaggttaacccggagaag
ctgatcaacgtgcagcagaaactgcaggctttcctggcgcaggagacggagcagaaggaa
agagcgcaaaggtgctttgtttcctacctccgctccatttacctgatgaagaacaaggac
gtcttcgacgtgttcgcgctgcagttgtccgaatacgctctctccttaggcctggctgtg
gctcctcgagtccgattccttaacaaagccaagaaggatagagaaggagacttggccgga
ctgtccacccacccgaacagcagggaggaagacgagtccagcaccgaggaagagctggag
agcttcagagctcaacttagagggcagagtcccacaggtgaccgtggggtgccctcagcc
aggggaggggtctcccaacacacagtgcccggtcctgctggagggccgcgtggacagggg
gaggaagactctgcagatacggagcagggtgagaccgccgaggcctcggagctgatgttc
tcggcagatgcggacgaggaagacgatctgagagacctggacttgctcaccgttaaaagg
aaggacgtttttgctttggaagctgacacacaggaggaagacctcagcaaaaaaccacca
aagaaaaaaacagagaaagaaaccaagttcaaagaagccaaaaaggtcttgaagagaaac
ttcagaatcaacacaaagaagacttttactgaagatggagaggtggtgcagcagtggcct
cctgcgcagaagacggcagtgccgcacgacgatgaggacgatgagactctgggcatcaat
gtggacaaggccaggcagaggctgcttgaagaggataaactggacaaagaagaatacagg
agaaaagtaaaggagaaacacaaggagaaaaggctcaaagaaaaggcagccaaacgagag
gccagcaagcgacagaaggaggggccggaagaggaggtggtggcctgcctggattctggc
gagagcgaggaggaggagttcgaccccggcaccctgcctgacccggacagaagcagggat
tccgagctggagcaggacagcgcctccgaaccagagcagagcagaacaccagccaggaag
aggccgcagaagagaaagtgcagcagcagcagcagcgaagctggcgggggtgaagcccgg
ctgggctggaagaagcccaagagccgtggtgacctgggtgtgctgaagccgctggacacc
ggcctgaccctgggggaggacgagcagctggtgctccacttgctgagcagccgtagctaa
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