Lepisosteus oculatus (spotted gar): 102691354
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Entry
102691354 CDS
T07349
Symbol
ercc4
Name
(RefSeq) DNA repair endonuclease XPF isoform X2
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03420
Nucleotide excision repair
loc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
102691354 (ercc4)
03460 Fanconi anemia pathway
102691354 (ercc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
loc03032
]
102691354 (ercc4)
03400 DNA repair and recombination proteins [BR:
loc03400
]
102691354 (ercc4)
DNA replication proteins [BR:
loc03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
102691354 (ercc4)
DNA repair and recombination proteins [BR:
loc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
102691354 (ercc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AmiA-like
Motif
Other DBs
NCBI-GeneID:
102691354
NCBI-ProteinID:
XP_006637249
Ensembl:
ENSLOCG00000007513
LinkDB
All DBs
Position
LG13:14491337..14498492
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AA seq
627 aa
AA seq
DB search
MTGPLLEFETEMFLSLFGSDGLLVTAEGLGLDRILLQFLRVYSEEGSLVLLLNTTTPEQE
FFTEKLRAEGVSHLPRTVTSEVPSGERLDVYTRGGVLFVTSRILVVDFLTDKIPASLITG
ILVYRAHKIIESCQEAFILRLFRQKNKTGFIKAFTDKPTAFSSGFCQVERVMRNLFVRKL
FLWPRFHAAVNSVLDRHKPDVVELRVSLTPGMSAIQSSVLDIMNACLKELKRYNPTLEVE
DLSLENALGRSFEKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLLYLTQYDCVTFLNLL
ESLRSSQKAFGSNSGWLFLDSSTSMFVNARSRVFRTLEPKDGLKKKAGATTNQEQNGEAE
VKKELVLEKSPKWEALTEVLQEIEKENNSSELGPGRVLICASDDRTCAQLQEYVTRGPEA
LLNRLYSRTFGRKETLLELNGEKRVPAKAKGKRGAEGGTKAKKPRAQAGKKQSKKPALTL
TQMVGKGDSREDGPAEREPMGSSADEEEGMPEEEEGEEKEEEEEGLILNLSSDSYYGVMK
EPLTVIHPLLGCSDPYSLTRVLHEVEPRYVVLYDAELPFVRQLEVYKASRPGQPLRVYFL
IYGGSTEEQRYLTALRKEKQAFEHLIR
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgacgggtcccctgcttgagtttgagaccgagatgttcctctcgctgttcggttcggac
gggctgctggtcacagccgaaggtctgggccttgaccggattctgctgcagttcctgcgg
gtctattcggaagaggggagtctggtgctgttgctgaacaccaccacgcccgaacaggag
ttcttcacggagaagctgcgggccgagggggtctcccacctccccaggacggtgaccagc
gaggtgccgagcggcgagcgcctggacgtctacacccggggcggcgtcctcttcgtcacc
agccgcatcctcgtggtggacttcctcacggacaagattcccgccagcctcatcacaggt
attcttgtgtaccgggctcacaagatcatcgaatcctgccaggaagccttcatcctgcgg
ctgttccgacagaagaacaagacaggcttcatcaaggccttcacggacaagcccaccgcc
ttcagctccggcttctgccaggtggagcgcgtcatgaggaacctgttcgtcaggaagctc
ttcctctggcccaggttccacgcggccgtcaactcggtgctggacagacacaagccggac
gtggtggagctgcgtgtgtccctcaccccgggcatgagcgccatccagagctcggtgctg
gacatcatgaacgcctgcctgaaggagctgaaacgctacaaccccacgctggaggtggag
gacctctctctggagaacgcgctgggccgctcctttgagaagacaatccgccactacctg
gatccgctgtggcaccagctgggggcgaagaccaagtccctggtgcaggacctgaagatc
ctgcgcaccctgctcctctacctcacccagtacgactgcgtcaccttcctcaacctgctg
gagtccctgcgcagcagccagaaggccttcgggagcaactccggctggctcttcctggac
tccagcacgtccatgtttgtgaacgctcgatcgcgggttttccgtaccctggaaccaaag
gatggccttaaaaaaaaggcaggagccacgacgaaccaggagcagaacggagaagccgaa
gtgaagaaggagctggtgctggagaagagccccaagtgggaggcgctgacagaggtgctg
caggagatcgagaaggagaacaacagctccgagctcggcccagggagggttctgatctgt
gccagtgacgatcggacctgtgcccagctgcaggagtatgtgacccgtggcccagaggct
ctgctaaaccggctgtacagtcgcaccttcggcaggaaggagacgctgctggagctgaac
ggggagaagagagtcccggccaaagccaagggcaagagaggagcagaaggcggcaccaag
gccaagaagcccagagcccaagctgggaaaaagcagagcaagaagcccgcgctcaccctg
acccagatggtggggaagggagacagcagggaggatgggccggcagagagggagccgatg
ggcagcagcgcagacgaggaggaagggatgccggaggaggaagagggagaggagaaggag
gaggaggaggaagggctgatccttaacctgtcctcggactcctactacggcgtcatgaag
gagcccctgaccgttatccacccactgctgggctgcagcgacccctacagcctgacgcgg
gtactgcacgaggtggagccgcgctacgtggtcctgtatgacgccgagctgcccttcgtg
cgccagctggaggtctacaaagccagccggcccggccagccactcagggtttattttctg
atctatggcggttccactgaggagcagaggtacctgacagccctgcgcaaagagaagcaa
gccttcgagcacctgatcaggtga
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