Lepisosteus oculatus (spotted gar): 102691423
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Entry
102691423 CDS
T07349
Symbol
abca5
Name
(RefSeq) ATP-binding cassette sub-family A member 5 isoform X1
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
102691423 (abca5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
loc02000
]
102691423 (abca5)
Transporters [BR:
loc02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
102691423 (abca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
RsgA_GTPase
AAA_29
AAA_23
MMR_HSR1
DUF6804
ABC2_membrane
Motif
Other DBs
NCBI-GeneID:
102691423
NCBI-ProteinID:
XP_015211991
Ensembl:
ENSLOCG00000012878
UniProt:
W5N5I4
LinkDB
All DBs
Position
LG10:37335507..37363706
Genome browser
AA seq
1644 aa
AA seq
DB search
MLPVKGRDARVWQQTKSLLHKNVLIKWRTKQQSLQELILPLLLLGLLILISTLNPHITYE
GIGTTELKHDAYLQEKTVGYTPITNYTIQIMEEVESNLRMGMEMFDTEAALENASRYDPY
NYVGVVFVDEMSYQLRFPYNQLPMPSDYTDSIASCFPSLTSCRAANYWYSGFVDLQTFIN
TAIIRAKTQHSVQEEMSSLRVVMMGQPGSVEVQKFPHALISIYLVLAFTPFVSFLIVNMA
AEKEHRLKDTMAMMGLRDSAFWLSWGLLYAGLVTTMSILMAVIATCTSLFPKSSFFVIFL
LIFLYGISSIFFSFMLTPLFKKPKFASTVGSMLTVMFGCLSLFTVLMKDFPQPLVWMLCL
LSPSAFSIGIAQVVYLEAVGDGAVFSTLTSGPHPLFVPVLMLVLDSFIYLLLALYLDQVL
PGEFGQRRSFLYFLRPSYWSRRGKRYEEVSSLYESEVNGGPTSLESVEPVSPEFRGKEAI
RINNIRKVYKEKDSNVEALRGLTFDIYEGQITALLGHSGAGKSTLMNILCGICPPTEGSA
TIYGSPVSEITQELEMRQLVGICPQFNIMFDVLTVEEHLHIFAAIKGIPPAQIDQEVAKV
LKDLDLEKIMDAQAKNLSGGQKRKMCVGIAVLGDPKILLLDEPTAGMDPCSRHQVWSLLK
SRQAGRVTVLSTHYMDEADILADRKAVISHGHLKCVGSSLYLKTKCGVGYHLRMSVNESC
EADQVTLLVKQHVPKAQLSRQQEAELTYTLPFENMNTFSGLFSELDSHPTLGIINYGVSM
TTLEDVFLKLEAEAEVDQADYSVFSQEQVEEEGDASSLDDADQRLLTFSDGRPEELSGHT
LWKQQFCTIVRLHVLNLQREKKPIIYILALFGIFLASVLTLSLITGNIQINAVPRLLSPD
VYLLRPNQAPRKYTTSLLVQNTTDSDIGGFVHNLEAQDIKVELMKDGNLTAAAPHSAGIN
VTGSRKGYEYTAVFNSTNVHSLPIVVNILSNALLRAFDNTSKICTWTKPFDFKMPETLSY
ALIYIEAVLLGMLGAGMPAYFAMDNTRDREIKCRSKLRVSGLLPSAYWCGQAVIDIPFYY
LILTSMTSTLFAFHSTDLLQSKAVAPVVLCLIGYGPSMILFTYMVSFLFTRVQSNRDFFS
VVSMMVCVVSASLVQLAYVNENQTLATVLHNTFCIFNPLYPLMGCLNCITKETFLEVTTN
EDVSALKKNLLIAVVVPYLHVILLLLLLRWLEIHCGGSTMKNDPLCRISAAKVKVHTNPE
VLENEDEDVQAERARVKEALTCQSCDEKPVMVVSDLRKEYKGRREGFYFNSKKKKVANKN
ISFCVRKGEVLGLLGPNGAGKSTTMYMLAGDTDPTAGQVESSLERIGYCPQVSPLWPKIT
LQEHLEIYAAIKGLHCHEIPGIIKRVVNALELKEHLHKQAKNLSAGIKRKLCFALCMLGN
PQIVLLDEPSIGMDPKSKQRMWRAIRTAFKNRQRGAILTTHYMEEAEAVCDRVAIMVSGQ
LRCIGSIQHLKGKYGRGYSLEVKLREEMTGLQQVALLHKAILRIFPHAARQESFATLMVY
KIPMEDVKSLAKSFLQLETAKQTFKFEEYNFSQSTLEQVFMELAKEQENEEQEVGSLSTH
FQWQRLQQDTPISANHAESVVHQL
NT seq
4935 nt
NT seq
+upstream
nt +downstream
nt
atgttgcccgtaaaagggagagatgcccgcgtctggcagcagacgaagagcctgctgcac
aagaacgtgctgatcaagtggcgcaccaagcaacagagcctgcaggagctgatcctgccg
ctgctgctcctgggtttgttgattctgatcagcacgctaaaccctcacatcacgtatgag
ggcattggcactacggagctgaagcacgatgcctacctgcaggagaagactgtggggtac
acgcccatcaccaactacaccattcagatcatggaggaggtagaaagcaacctccgcatg
ggtatggagatgtttgacactgaggctgctctggagaatgccagccggtatgatccctac
aactacgtgggcgtggtctttgtggatgaaatgtcctatcagctgcgcttcccctataac
cagctgcctatgcccagtgactacacagactccattgccagctgtttccccagcctcacg
tcatgcagggccgctaactactggtactcggggtttgttgatctccagactttcatcaac
acagccatcatacgggctaagactcagcactcggtacaggaggagatgagcagcctccga
gttgtgatgatgggccagcccgggtctgttgaggtgcagaagtttcctcatgccctcatc
tccatttacctggtgctggccttcacgcccttcgtctccttcctcatcgtcaacatggcc
gcggagaaggagcaccggctgaaagacaccatggccatgatggggctccgagacagtgct
ttctggttgtcttgggggttactgtatgcaggtctggtcaccaccatgtccatcctgatg
gctgtgattgccacttgcacctctctcttccccaaaagcagcttctttgtcatctttctg
ctcatcttcctctatggaatctcttctatattcttctccttcatgctgactcctttattt
aagaaaccgaagtttgccagcactgtgggatccatgctcactgtgatgtttggatgtttg
tccctcttcactgtgctgatgaaagactttccacagcctctggtctggatgctgtgccta
ttgtctcctagtgccttctccattggcattgctcaggtggtatatctggaagctgttggt
gatggcgcagtgttctctaccctgaccagcgggccccacccactctttgtacctgtgctc
atgctggtcctggacagcttcatctatctgctgttggctctatacctggaccaggtcctg
ccaggcgagtttgggcagcggcggtcctttttgtactttctgaggccttcctattggtca
agacgcggcaagcgatacgaagaagtgagctctttgtacgagagcgaggttaacggtggc
cctacttctctggagtcggtggagcctgtctctccagagttcagggggaaagaggccatc
agaataaacaatatccggaaggtttacaaggaaaaggacagcaacgtggaggcactgaga
ggtctgacttttgacatctatgagggccaaatcacggctctcctggggcacagtggagca
gggaaatccacgctgatgaatattctttgtgggatctgtcctcccactgaaggatcggcc
acgatctatggctcgccggtgtcggagatcacgcaggagctggagatgcggcagctggtg
ggcatctgcccacagttcaacatcatgttcgatgtgctgaccgtggaggagcacctgcac
atcttcgctgccatcaagggcatcccgccagctcagatcgaccaggaggtggccaaggtg
ctgaaggacctggacctggagaagatcatggacgcccaggctaagaacctaagtggtggt
cagaagaggaagatgtgtgtgggcatcgctgtcttgggggacccaaagattctgctgctg
gacgagcccacagctggaatggacccctgctctcggcaccaggtctggtctctgttgaag
agccggcaggcagggcgggtcactgtgctaagcacacactacatggatgaggccgacatc
ttagcagaccgcaaagctgtgatttcgcacgggcatctgaagtgtgtggggtcctctctg
tacctcaaaaccaaatgtggggtcggctatcacctcaggatgtcagtgaacgagtcatgt
gaagccgatcaagtcaccctattggtcaagcaacatgttcccaaagcacagttgtcacgg
caacaggaggcagagctgacctacaccctcccctttgagaacatgaacacattctcaggc
ctgttctccgagctggacagccaccccactttgggaataattaactacggggtttccatg
acgaccctggaggatgttttcctgaaactggaggctgaggcagaggtggatcaagcagat
tacagcgtgtttagccaggagcaggtggaggaggaaggggacgcgtcctccctggacgac
gcagaccagaggctcctcaccttctccgacggccggcccgaggagctgtccggccacacg
ctgtggaagcagcagttctgcaccatcgtccggctgcacgtcctcaatctgcagagggag
aaaaaacccatcatttacatccttgctctttttgggatctttctggcctcagtgctgacc
ctgtccctgatcactgggaatatccagatcaacgctgtgcctcgcctgctctctccagat
gtctatctgctgcggccgaaccaagccccccggaagtacaccaccagcctgctggtccag
aacaccactgactccgatataggaggttttgtccacaacttagaagctcaggacattaaa
gtggagttgatgaaagacgggaacttaacagctgctgctccgcacagtgctggaatcaat
gtaactggctcccgcaagggctatgagtacactgcagtgtttaacagcacaaatgttcac
tccttgcccatcgtggtcaacatcctgagcaatgctcttctgcgggcttttgataacacc
agtaaaatttgtacctggacaaaaccctttgactttaaaatgccagagacgctatcttat
gctcttatttacattgaggctgttttgctgggaatgctgggagcaggaatgccagcttac
tttgctatggataacacaagggatcgtgagattaagtgccgctccaagctgcgtgtctct
ggcctgttgccttctgcatactggtgtggccaggcggtcattgatattcccttttactac
ctcatccttaccagcatgaccagcacactgttcgccttccactccacagacctgctgcag
tccaaagctgtcgccccagtggttttatgtctaattggctatggtccatccatgatcctc
ttcacctacatggtttctttcctgttcactcgagttcagagcaatcgggatttcttttct
gttgtgtcaatgatggtgtgtgtggtgtctgcctccctagtgcagctggcctatgtgaat
gagaaccagaccttggccacagtgctgcataacacgttctgcatctttaaccccctctac
cccttgatgggctgtctcaactgcattaccaaggaaaccttcctggaagtaaccaccaat
gaagacgtatctgctctgaagaagaaccttctcatagctgttgtggtgccctacctgcat
gtcatcctcctgctgctcctgctgcgctggctggagatccactgcgggggcagcaccatg
aagaatgacccactctgcaggatcagcgcagcaaaggttaaagtgcacacaaacccagag
gtgctggagaatgaagacgaggatgtccaggctgagagagcgagagtcaaagaggcccta
acgtgtcagagctgtgacgagaagccggtgatggtggtgagcgacctgagaaaagaatac
aaaggccggagggaaggcttttatttcaactccaagaagaagaaagtggcaaacaaaaac
atctctttctgtgttcgcaaaggggaggtcctgggcctgctggggcctaatggggcaggg
aaaagcaccaccatgtacatgctggctggagacactgacccaacagcaggacaggtggaa
agctccctggagcgcattgggtactgccctcaggtcagtcctctctggcccaagattact
ctgcaggagcacctggagatctacgctgccatcaagggccttcactgccacgagatcccg
ggcatcatcaaacgtgttgtgaatgcactagagctgaaggaacatcttcacaagcaggcc
aagaatctctccgccggaataaaacggaagctgtgctttgccctgtgtatgcttggaaac
ccccagattgtgcttctggatgaaccctctataggcatggaccccaaatccaaacagcgg
atgtggagagctatccgcacagctttcaagaaccgccagcggggggcgatactgaccact
cactatatggaagaagctgaggcagtgtgtgaccgggtggctatcatggtgtcaggacag
ctgcggtgtattgggtcaatccagcacctgaaggggaagtatggccgggggtacagtctg
gaggtgaagctccgagaagagatgactggcctgcagcaggtggctctactgcacaaggcg
atcctgaggatcttccctcatgctgcgcgccaggagagctttgccactctgatggtttac
aagatccccatggaagatgtaaaatcacttgcaaaatcttttttacagttagagacagca
aagcagactttcaaatttgaggagtacaacttttctcaatctacccttgagcaggtcttc
atggaacttgcaaaagaacaggagaatgaggagcaggaagtgggttccttaagcacacat
ttccaatggcagagacttcagcaggacacgcccatatctgcaaaccatgcagagagcgtt
gtgcatcagctgtga
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