Lepisosteus oculatus (spotted gar): 102691487
Help
Entry
102691487 CDS
T07349
Symbol
vcpip1
Name
(RefSeq) deubiquitinating protein VCIP135
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
loc01002
]
102691487 (vcpip1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
loc04121
]
102691487 (vcpip1)
Enzymes [BR:
loc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102691487 (vcpip1)
Peptidases and inhibitors [BR:
loc01002
]
Cysteine peptidases
Family C64
102691487 (vcpip1)
Ubiquitin system [BR:
loc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
102691487 (vcpip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
Motif
Other DBs
NCBI-GeneID:
102691487
NCBI-ProteinID:
XP_006634063
Ensembl:
ENSLOCG00000004697
UniProt:
W5MB69
LinkDB
All DBs
Position
LG9:6597213..6616955
Genome browser
AA seq
1201 aa
AA seq
DB search
MSLQQGSKKKDKRILSGTCPDPKCQARLFFPAYGSVSIECTECGQRHEQKNLLKVEEVTD
PDVVLHNLLRNALLGVTGAPKKGTELVKVMGLSNYHCKLLSPVLTRFGMDKQTGKAKLLR
DMNQGEMFDCSLLGDRAFLIEQEHVSTVGYGRDRSGSLVYLHDTLEELKKANRNKECLIP
VHVDGDGHCLVHAVSRALVGRELFWHALRENLKQHFKQNLERYKALFQDFIDAAEWEDII
NECDPLFVPPEGVPLGLRNIHIFGLANVLHRPIVLLDSLSGMRSSGDYSATFLPGLVPEE
KCKGKDGHFNKPICIAWSSSGRNHYIPLVGIKNAPLPRLPAKLLPKAWGVPQELIKKYIR
LESDGSCVIGGDRSLQDKYLMRLVSAMEEVFMDKHGIHPSLVADVHQYVYRRTGVIGVQP
EEVTEAAKRAVAEHRLHRCLICNALSELHVPPEWLAPGGKLYTLAKSTHGQLRPDKNYSF
PLNNVVCSYDADRDALVPDYKLSHLGACNWCHGTSVRRVRGDGSVVYLDGDRTSARSRGG
KCGCGFKHFWEGKEYDNLPEAFPITLEWGGRVVRETVYWFQYEAEPSLNSNVFDVAMKLV
TKHFPGEFGSEILVQKVVNTILNHTAKKNPDEYNPVAVDGAAHAHQRPGEVADGQAAVEV
QPPTKIILTGQKAKTLHKEELNMSKAERSLQQSISENASAAQKKRTDKLKQEQRAQARPA
SPGPVREGPSSAPATPTKAPSSPQSSKEKKIRVTTTDGRQAMLTLQVETTFAALQESLAR
EFAVPPAQQCIRYGFPPKELLPPGAGSEDEPVPLQHGDRVTLEAVRDPQEKEAAAPAASA
SAPAPHAVKSEDPASSSRPTPRELQDHIDLEMSSLCLLATLMGEDVWSYAKKLPHLFQHG
GVFYNIMKKDMGLMDGKHCTLPHMPGKTFVFNAAEDRLELCVDVAGHFPVGPEVEELVKE
ALTQLRSEAASRSREGSPSHGLLKLGSGGVVRKKSDQSHHVTAFQGKGHSLGSAAGSSPA
EQKPRERPISRKHSSGVDLSGSAPQPGAELSDISEDAAKELVRMAPGFVTMKDGRHLDPG
MIEAQRKKLQEMVSSIQASMDRHLREQGGGEPAPGERAPRKAEAGSLGSRTDGTRTMAPQ
PVLGIGDHEPSGMDVSALGTSSGVEVTARKPTGKGTTTEELEDMDSQDTELTIATEPMDH
S
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgcagcaggggtcgaagaaaaaggacaagcgtattttgtctggtacctgcccg
gacccgaaatgtcaggcgaggcttttcttccctgcttacggctcggtcagcattgagtgc
accgagtgcggccagcgtcatgagcagaaaaatctcttgaaagtggaagaagtgaccgac
ccggacgtcgtgcttcacaacttgctaagaaatgcccttctcggggttaccggcgccccc
aaaaagggaaccgagttagtgaaagtgatggggctctccaactaccactgcaagttgctg
tccccagtcctgacgaggttcggcatggacaagcagaccgggaaagccaagttgttgcgg
gacatgaaccagggggagatgtttgactgctcgcttttgggtgacagggctttcctcatt
gagcaggagcacgtgagcaccgtgggctacggcagggatcgctccggtagcctcgtgtac
ctgcatgacaccctggaggagctgaagaaagccaaccggaacaaggagtgcctgattccg
gtccacgtggacggggacgggcactgcctggtccacgccgtgtcccgggcgctggtgggc
cgggagctcttctggcacgctctgcgggaaaacctgaagcagcatttcaagcagaacctg
gagcgctacaaggccctcttccaggacttcatcgacgcggccgagtgggaggacataatc
aacgagtgcgaccccctgttcgtcccgcccgagggcgtcccgctcgggctgcgcaacatc
cacatcttcgggctggccaacgtgctgcaccgccccatcgtcctgctggactcgctgagc
gggatgaggagctccggggattactccgccaccttcctgccgggactggtgccggaggag
aagtgcaaggggaaggacggccacttcaacaagcccatctgcatcgcctggagcagctcg
ggccggaaccactacatccccctcgtcggcatcaagaacgcccccctgcccaggctgccg
gccaagctgctgcccaaggcctggggggtcccgcaggagctcatcaagaagtacatccgc
ctggagtcggacgggagctgcgtgattggaggagaccggagcctgcaggacaagtacctg
atgaggctggtgagcgccatggaggaggtcttcatggacaagcacgggatccacccgtcc
ctggtggccgacgtccaccagtatgtgtatcggaggaccggcgtgatcggggtgcagccc
gaggaggtgacggaggccgccaagagagccgtcgcggagcaccgccttcaccgctgcctg
atctgcaacgccctgtcggagctgcacgtgcctcccgagtggttagcccccggcggcaag
ctctacaccctggccaagtccacccacgggcagctccggcccgacaagaactacagcttc
cccctgaacaacgtcgtgtgctcctacgacgccgacagggacgcgctggtgcccgactac
aagctgagccacctgggcgcctgcaactggtgccacggcacctccgtgcgccgcgtgcgg
ggcgacggctccgtcgtgtacctggacggggaccggaccagcgcccgctcccggggcggc
aagtgcggctgcgggttcaagcacttctgggaaggcaaggagtacgacaatctgccggag
gccttccccatcaccctggagtggggcggcagggtggtgcgggagacggtgtactggttc
cagtacgaggccgagcccagcctgaacagcaacgtgttcgacgtggccatgaagctggtc
accaagcacttccccggggagttcgggagcgagatcctggtgcagaaggtggtgaacacc
atcttgaaccacacggccaagaagaacccggacgagtacaacccggtcgccgtcgacggg
gcggcgcacgcccatcagaggccgggggaggtggcggacgggcaggccgcggtggaggtg
cagccgccgaccaaaatcatcttgaccggccagaaggcgaagaccctgcacaaggaggaa
ctgaacatgagcaaggcggagcgcagcctgcagcagagcatcagcgagaacgcctcggcc
gcgcagaagaagaggaccgacaagctgaagcaggagcagagggctcaggccaggcccgcc
tccccgggccccgtccgcgaggggccctcctcggcccccgccacccccacgaaagccccc
tcctccccccagtccagcaaggagaagaagatccgcgtgaccaccaccgacgggcggcag
gccatgctgacgctccaggtggagaccaccttcgccgcgctccaggagagcctggcccga
gagtttgccgtgccccccgcccagcagtgcatccgctacggcttcccacccaaggagctc
ctgcctcccggggcggggagcgaggacgagcccgtgcccctgcagcacggggacagggtg
actctggaggcggtgagggacccccaggagaaagaagcagcggcccccgccgcttcagcc
tctgctcctgccccccacgcagtcaagagcgaggatcctgcgtcttccagcagacccacc
cccagagagctgcaggaccacattgacctggagatgtcctccctgtgcctcctggcaact
ttaatgggagaagacgtctggtcttacgccaagaagctgcctcacttatttcagcacggc
ggggtcttctacaacatcatgaagaaagacatgggtctgatggacggcaagcactgcacg
ctgccccacatgcccgggaagaccttcgtgttcaacgcggccgaggaccggctggagctg
tgcgtggacgtggcgggccacttcccggtgggcccggaggtggaggagctggtgaaggag
gcgctgacccagctgcgctcggaggccgcctcgcgcagcagagagggcagcccctcccac
gggctgctgaagctgggcagcggaggggtggtcaggaagaagtcggaccagtcgcaccac
gtcacggccttccaggggaagggccactcgctggggagcgcggcgggcagctcccccgcc
gagcagaagccccgggagcggcccatctcgcggaagcacagcagcggggtggatctgagc
ggcagcgctccccagccgggggccgagctgtccgacatctcggaggacgcggccaaggag
ctggtccgcatggcgccgggcttcgtgaccatgaaggacgggaggcacctggaccccggc
atgattgaggcgcagcgcaagaagctgcaagagatggtgtcctccatccaggcgtcgatg
gacaggcacttgcgggaacagggcgggggggagcccgcgccgggagagcgcgcccccagg
aaagcggaggccgggagcttgggaagtaggacagacggcacaaggaccatggcgccgcag
cccgtcctgggaattggcgaccacgagccttcgggcatggacgtgtccgctcttggcaca
tccagcggggtggaagtgacagcaaggaagcccactggaaaaggcacgaccacagaggaa
ctggaagacatggacagccaggacaccgagctgaccattgccactgagccaatggatcac
tcctga
DBGET
integrated database retrieval system
