Lepisosteus oculatus (spotted gar): 102691505
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Entry
102691505 CDS
T07349
Symbol
dis3
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102691505 (dis3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loc03019
]
102691505 (dis3)
Messenger RNA biogenesis [BR:
loc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
102691505 (dis3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
Rrp44_CSD1
PIN_4
Rrp44_S1
CSD2
Dis3l2_C_term
DUF6389
Motif
Other DBs
NCBI-GeneID:
102691505
NCBI-ProteinID:
XP_006639445
Ensembl:
ENSLOCG00000011319
UniProt:
W5MZV9
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All DBs
Position
LG17:complement(32140314..32153180)
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AA seq
951 aa
AA seq
DB search
MLKSKTFVKKTRSGGVRKIVREHYLRDDIWCGSEVCQSCPQDSTVLQRNAYMESSLCSSP
HYLIPDTNVVLHQIDILEDPLIRNVIILQTVLQEVRHRSAPVYKRIKDAIHNAEKHFYTF
TNEHHRETYVEQEQGESAAELHDRTIRVAAQWYTEHLKKAQTAEDLKVILLTHDGKCKEK
AEEIGLVSYNCEEYIKSLIANPELVDRLALKSEENNESDRGKILFPEHLPLSKIQAGIKS
GRLLQGTFRANRDNYLEASVFVHRDGEEDVEVLIQGLRSLNRAVHQDVVAVELLPKSEWA
APSSVVLEDEGPKEDENEDEKENILKSVASEKMLKPTGRVVGIIKRNWRPYCGMLSKSHI
KEATKHLFTPADRRIPRIRIETRQASALEGQRIIVAIDGWPKNSRYPNGHFVRNLGSAGD
KGTETEVLLLEHDVPHQAFSQAVLGFLPKMPWSITEEDMKNREDLRHLHVCSVDPPGCTD
IDDALHCKDLENGNLEVGVHIADVSHFIRPGNALDQESASRGTTVYLCERRIDMVPELLS
SNLCSLRSNVERLAFSCIWEVNHNAEIVKTRFTKSVINSKASLTYAEAQMRIDDASMNDE
ITKSLRGLNRLAKILKKKRIENGALTLSSPEVRFHIDSETHDPIDMQTKELKDTNSMVEE
FMLLANISVAQKIYEEFPEFALLRKHPAPPPSNYDILVKAAKSKSFELRTDSAKALADSL
DAARAQGFPYFNTLLRILATRCMMQAVYFCSGMDSDFHHYGLASPIYTHFTSPIRRYADI
IVHRLLAAAIGADSTYPDLMDKHKQAALSNNLNYRHKMAQYAQRASVAFHTQLFFKSRGI
LNEEGFILFVKKNAIVILIPKYGLEGRVFFENKDKNNPRLTFIEEIPALTVEHHTFHLFD
KVKVTISLDSSNIQHQKIRMSLVEPVIPGVSVSPQSAQDCEPEAKKTKLDC
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtctaaaacgtttgtaaaaaagacacggtccggcggggtgaggaagatcgtt
cgagagcattatctcagagatgatatctggtgtggaagcgaagtttgtcagtcgtgccca
caggactccacggtgttgcagaggaatgcctacatggagagtagcttgtgctcttctcct
cactacctaattccggacacgaatgtcgttttacaccagatcgatatccttgaagatcca
ctgatcaggaacgtgataatcttgcagacggttttgcaagaagtaagacacagaagtgct
ccagtttacaagaggatcaaagatgctattcataacgcggagaaacatttctacactttc
actaatgaacaccatagggagacctacgtcgagcaagagcagggagaaagcgccgcagag
ctgcacgaccggacgatccgcgtggcagctcagtggtacactgagcacctgaagaaggcc
cagacagccgaggacctgaaagtcattctgctcacacatgatgggaagtgcaaggagaaa
gctgaagagatcggcttggtgtcatataattgtgaagagtacattaagagcttgattgca
aaccctgaacttgtggaccgcctggctttgaaatcggaagagaataatgaaagtgacagg
ggtaagatcctctttccagagcatctcccactctccaaaatacaggctgggatcaagtct
gggcgtctgctccagggcacattccgtgcaaacagagacaactatctggaggccagtgtg
tttgtccacagagacggggaggaagatgtagaggttttgatccagggactcagaagcctg
aaccgggctgtgcaccaggatgtggtggctgtggagttactgcccaaaagcgagtgggca
gcaccctcctctgttgtcctggaggacgaaggccctaaggaagatgagaatgaagacgaa
aaggaaaatattctgaaatctgtagccagtgagaagatgctgaaacccactgggagagtc
gtgggcattataaagcgaaactggagaccgtactgcggaatgctttcaaaatcacatatt
aaagaggcaacaaagcatttattcactccagctgaccgcaggatcccccggatccgaata
gaaactcgtcaggcttctgctttagaaggacagaggattatcgttgccattgacggttgg
cctaaaaattctagatatcctaatggccactttgtgaggaatctggggagtgccggggac
aaaggaacggagacggaagtgctccttctggagcatgacgttcctcatcaggccttttcc
caggccgtcctcggcttccttcccaagatgccatggagcataacagaggaggatatgaaa
aaccgtgaagacctgagacacctacatgtgtgtagtgtggatcctcccgggtgtacggat
atcgacgatgcacttcactgcaaggacttggagaacggaaatttagaggttggagttcat
atagcggatgtcagtcatttcattcgtcctggaaatgctctggaccaagaatcagcgagc
cgagggaccacagtctacctttgcgaaaggcgaatcgacatggttcctgaactgcttagc
tcaaatttatgttctctaagatctaatgtagagaggctggcgttctcttgcatctgggag
gtgaaccacaacgctgaaattgttaagacgcggtttacaaaaagtgtgatcaattccaag
gcatctcttacttacgctgaagcccagatgagaatcgatgatgccagcatgaacgatgaa
ataaccaaaagcttgcgtggtttgaacagattagccaagatacttaagaagaaaaggatt
gaaaacggagcgttaactctgtcttctcctgaagtacgtttccacatagacagtgagact
cacgaccccattgacatgcaaaccaaggagctcaaggatactaactctatggttgaagag
ttcatgttgttagcaaacatatcagtagctcagaagatctacgaagagtttcctgaattt
gcccttctcaggaaacatcctgccccaccgccttccaattatgacatccttgtcaaggca
gcaaaatctaagagcttcgaactccgaacggactctgcgaaggcgcttgcagactctctg
gatgcagctcgagcacaggggtttccgtacttcaacacgctgctgaggatcctggccact
cgctgcatgatgcaggctgtgtatttctgttctggaatggacagcgatttccatcactac
ggcctcgcttcgcccatctacacacacttcacctcgcccatcagaaggtacgctgacatt
atagtgcatcgtctgctggcagcagctataggagcagacagtacgtatcctgacctgatg
gacaaacacaagcaggcagctctgagcaacaacctgaactatcgacacaaaatggcacag
tatgcccagagagcatcggttgccttccacacacagttatttttcaaaagcagagggatt
cttaatgaagaaggttttattctgtttgtcaagaaaaatgccatcgttattctcataccc
aaatatggacttgaaggcagagtgttttttgaaaacaaagacaaaaacaacccccgtctg
acttttattgaggagattcctgccctgactgtggaacaccacacctttcatctgtttgac
aaagtgaaagtaaccataagtctagattcttcaaacatccagcatcagaagattcgaatg
tcccttgtggagccagtgatccctggggttagtgtatctcctcagtcagcgcaagactgt
gaacctgaagcaaagaagaccaaactggattgttga
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