Lepisosteus oculatus (spotted gar): 102691611
Help
Entry
102691611 CDS
T07349
Symbol
tnpo3
Name
(RefSeq) transportin-3 isoform X2
KO
K15436
transportin-3
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03013
Nucleocytoplasmic transport
loc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102691611 (tnpo3)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102691611 (tnpo3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
loc03016
]
102691611 (tnpo3)
Transfer RNA biogenesis [BR:
loc03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
102691611 (tnpo3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_4th
TPR_TNPO3_IPO13_3rd
TPR_TNPO3_IPO13_2nd
Xpo1
IBN_N
Importin_rep_3
Motif
Other DBs
NCBI-GeneID:
102691611
NCBI-ProteinID:
XP_006633284
Ensembl:
ENSLOCG00000015556
UniProt:
W5NEU5
LinkDB
All DBs
Position
LG8:10425391..10456991
Genome browser
AA seq
922 aa
AA seq
DB search
MEGGKPSLSLVYQAVQALYHDPDPAGKERASVWLGELQRSMYAWEISDQLLQIKQDVESC
YFAAQTMKMKIQTSFYELPAETHISLRDSLLSHIQNLKDLSPIIVTQLALAIADLALQMA
SWKGCVQTLIEKYSNDVSSLIFLIEILTVLPEEVHSRSLRIGANRRTEIIEDLAYYSSTV
VTLLMSCVEKTGSDEKMLIKVFRCLGSWFNLGVLDSNFMANNQLLMILFQVLQRDETSTN
LHEAASDCVCSALYAIENVDNNMPLALQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFT
ELCETFLETIVRSPGQGLGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKSDPVL
HAIFRPYIQRLLHALARHCQLDPDHEGIPEDTDDFGEFRMRVSDLVKDVIFLVGSMECFS
QLYATLKDGNPPWEVTEAVLFIMAAIAKSVDPENNPTLTEMLEQVVLLPQTVHSAVRYTS
IELVGEMSEVVDRNPRFLDPVLNYLMKGLREKPLASVAAKAIHNICSVCRDHMAQHFQGL
LDIARALDSFALSPEAAIGLLKGTALVLARLPLEKIAESLSDLCAVQVVALKKLLSQEPR
NGKSSDPTVWLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVLSETLNKHQADNRIVER
CCRCLRFAVRCVGKGSAALLQPLVTQMVNVYQIYPHSCFLYLGSILVDEYGMEEGCRQGL
LDMLQALCMPTFQLLEQPSGLRNHPDTVDDLFRLATRFIQRSPVTLLGSQIIIHIIQCAI
AATTLDHRDANCSVMKFVRDLIHTGLTNDHEDDFELRKQLIQQAMNQHGQQLVSQLIHAC
CFCLPPYTLPDVAEVIWEIMLFDRPTFCRWLESALKGLPKETSGGAVTVTHKQLTDFHKQ
VTSAEECKQVCWALREFTRLFR
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggagggtggcaagccttccctttcgctggtgtatcaggccgtacaggctctttatcat
gacccggaccccgccggcaaggagagagcctccgtatggctcggagagctgcagagatcg
atgtatgcatgggagatatcagatcaattgctccagataaaacaagacgtcgaatcgtgt
tactttgcagcacagacgatgaagatgaaaattcagacctcattctacgagcttcctgca
gaaacgcacatttccctgagggactcactgctgtcacacatacaaaaccttaaagacctc
tctccaattattgtcacccagcttgctctagcaatagccgatcttgctctacagatggcg
tcctggaaaggttgtgtccaaacgcttattgaaaagtacagtaacgacgtctcctcgctc
atctttctgattgaaatcctcactgttctacctgaagaggtgcatagccgttccctccgg
attggtgccaatcgccgcactgagatcattgaggacttggcttattactcaagcactgtt
gtaactctgctgatgtcttgtgtggaaaagacagggagtgatgagaagatgctgattaag
gtattccgttgccttgggagctggtttaaccttggcgttctggacagtaacttcatggcc
aacaaccagctgctaatgatactcttccaggtgctgcaaagggatgaaacctccaccaac
ttgcacgaggcagcctcagattgcgtatgctctgctctgtatgcaatagagaatgtagac
aacaacatgcccctagcactgcaactattccaaggggtcctgacactggagacggcctac
cacatggcagtggctcgggaggatctagacaaggttttgaattactgccgtattttcact
gagctctgtgagactttcttggagacaatagtaagaagtcctggccagggtttgggagac
cttcgaacactagagcttcttctcatctgtgcaggacacccacagtatgaagtagtggag
atctcctttaatttttggtatcgattaggagagcatctatataaaagtgacccggtgctc
catgcgattttccgaccgtatatccagagattgctgcacgcgctggctaggcactgccag
ctagaccctgaccatgaaggaatacctgaggatacagatgattttggagaattccgaatg
agagtctctgatctcgtgaaggatgtcattttcttggttggctccatggaatgtttttca
cagttgtatgctactctgaaagatggtaatccaccatgggaggtgactgaggcggtcctt
ttcataatggcagccatagcaaagagcgtggatccagagaataacccaacacttacggag
atgctcgaacaagtggttcttctgccccagactgtgcacagtgcggtcagatacacaagc
attgagttagttggagagatgagcgaggttgttgaccgaaatccccgtttcctagatcct
gtgttaaattatttaatgaagggtctgagggagaagccgctggcgtcagtagctgctaaa
gcaatccacaacatttgctcagtgtgccgggaccacatggcacagcatttccagggactt
ctggacattgcccgggccctggactctttcgctctgtctcctgaagccgctattgggctt
ctgaaaggcactgcattagttttagcccgacttccacttgagaaaattgctgaaagtttg
agtgatctttgtgcagtgcaggtcgtagcccttaaaaagcttctctcccaagagcccagg
aatggtaaatcttcagatcccacagtatggctagatagattagcagtaattttcagacac
acaaaccctatagtagaaaatggccagacccatccatgtcaaaaagttattcaagaaatt
tggcctgtcttgtcggagacactgaacaaacatcaggcagataacaggattgtggagcgg
tgctgtcggtgtctgcgctttgctgtgcgctgcgtcgggaagggctcggcggccctgctg
cagccattggtcactcagatggtgaatgtgtatcagatttatccccattcttgctttttg
tacttgggaagtatcctggtggatgagtatggaatggaggaaggttgtcgacaagggctt
cttgatatgttgcaggcattgtgtatgccaacctttcagctgctggaacagcccagtggt
ctccgaaatcaccctgataccgtggatgatctctttagactggcaacaaggtttattcag
cgaagtcctgtcaccctgttgggcagccagatcataatccatattatccagtgtgccatt
gctgccactacccttgaccatcgggacgcaaactgtagcgtgatgaagtttgtgcgggat
ctgattcacaccggcctcactaatgatcatgaagatgactttgagttgcgcaagcagttg
attcaacaagcaatgaaccagcatgggcagcagctagtgagccagctgatacatgcgtgt
tgcttctgcctgcccccctacacgctgcctgatgtggcagaggtcatctgggaaatcatg
ctgtttgatcggccaacattctgccgctggctggagagtgctttaaagggtcttcccaag
gagacttccggtggagctgtgactgtgacacacaagcagctcactgactttcacaaacaa
gtaaccagtgctgaagaatgcaaacaagtctgttgggcactaagagaattcaccagattg
ttccgatag
DBGET
integrated database retrieval system