Lepisosteus oculatus (spotted gar): 102691737
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Entry
102691737 CDS
T07349
Symbol
vcl
Name
(RefSeq) LOW QUALITY PROTEIN: vinculin
KO
K05700
vinculin
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04510
Focal adhesion
loc04520
Adherens junction
loc04810
Regulation of actin cytoskeleton
loc04820
Cytoskeleton in muscle cells
loc05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102691737 (vcl)
04520 Adherens junction
102691737 (vcl)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102691737 (vcl)
04810 Regulation of actin cytoskeleton
102691737 (vcl)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
102691737 (vcl)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
loc04812
]
102691737 (vcl)
04147 Exosome [BR:
loc04147
]
102691737 (vcl)
Cytoskeleton proteins [BR:
loc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
102691737 (vcl)
Exosome [BR:
loc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102691737 (vcl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
DASH_Spc34
Mob_Pre
Motif
Other DBs
NCBI-GeneID:
102691737
NCBI-ProteinID:
XP_015201744
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All DBs
Position
LG5:5442362..5491805
Genome browser
AA seq
964 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTGPVAAVQAAVSNLVRVGKE
TVQTTEDQIMKRDMSPAFIKVENACTKLVQAAQMLRGDPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISGIKIYVTTKSSQSHGVEEALKNRNFTMEKMSAE
INEIIRVLQLTSWDEDAWASKDTEAMKRALALIDSKMAQAKGWLRDPNAQPGDTGEQAVR
QILDEAGKVGELCAGKERRDILGTAKTLGQMTDQVSDLRARGQGAAPVAMQKAQQVSQGL
DMLTAKVENAARKLEAMTNSKQAIAKRIDAAQNWLADPNGGPEGEENIRGILAEAKKIAD
LCEDPKERDDILRSLGEIAALTGKLSDLRRQGKGDTPEARALTKQIATALQNLQSKTNRA
VANTRPVKAAVNLEGKIEQAQRWIDNPSVDDRGVGGEALRAAVRLDLAAESDSPIASLVD
EAIDTKSLLDASEDAIKKDIDKCRVAMANVQPQMLVAGATSIARRANRILLVAKREVENS
EDPKFREAVKAASDELSTTISPMVMDAKAVAGNIQDPGLQKSFLDSGYRILGAVAKVREA
FQPQEPDFPPPPPDLDQLHVNDEPAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVV
NQPMMVAARQLHEEARKWSSKPDVTDEGIEAAEADVDIDDEDEVDDIEFTLPSDNEDDYE
PELLLMPTNQPVNQPILAAARSLHQEARKWSSKGNDIIGAAKRMALLMAEMSRLVRGGSG
NKRALIQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVK
ATMLGRTNISEEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKT
PWYQ
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgccagtgttccacacgaagacgatagagagtatcctggagcccgtggctcagcagata
tcccacttggtgatcatgcatgaggaaggggaggtggacggcaaggcgatccccgacctg
accggacccgtggccgccgtgcaggcggctgtgagcaacctcgtcagggtggggaaggag
actgttcagaccacggaggaccagatcatgaagagagacatgtccccggccttcattaag
gtggagaacgcctgcactaagctggttcaggcggcccagatgctaaggggggacccctac
tccgtcccggcacgcgactatctcattgacggatctcgggggatcctgtctggcacctcg
gatttgcttctgaccttcgacgaggcggaggttcggaaaataatccgtgtgtgcaaaggg
atcctggagtacctgaccgtggcagaagtggtggagactatggaggatttagtcacgtat
acgaaaaatctgggaccaggcatgacgaagatggccaagatgattgacgagaggcagcag
gagctgacgcaccaggagcacagggtgatgctggtgaactccatgaacaccgtgaaggag
ctgctgcctgtgctcatatcaggtatcaagatctacgtgacgacaaagagctcccagagc
cacggcgtggaggaggccctgaagaaccgcaacttcaccatggagaagatgagcgccgag
atcaacgagatcatccgcgtgctgcagctcacctcctgggacgaggacgcctgggccagc
aaggacactgaggccatgaagagagccttggcgctcattgactccaagatggctcaagcc
aagggatggctgagagaccctaacgcacaaccaggggacactggcgagcaggcggtgagg
cagatcctggacgaggccggtaaggttggagagctgtgcgccggcaaggagaggagagac
atcctgggcacggccaaaactctggggcagatgaccgaccaagtgtcagacctgcgagcc
agggggcagggtgccgcgcctgtggccatgcagaaggcccagcaggtgtctcagggcctg
gacatgctcacagcgaaggttgagaacgcagcccgcaaactagaagccatgaccaactcc
aagcaggccattgccaagaggatcgacgccgcgcagaactggctggctgacccgaacggc
ggtcccgaaggcgaggagaacatccgtgggatcctggccgaagcgaagaagatcgcggac
ctctgcgaggaccccaaggagcgggacgacatcctgcgctctctgggagagatcgccgct
ctgacgggaaagctctccgacctcagaaggcagggcaaaggtgacactccagaagccagg
gctctaaccaagcagatcgccacagcgctgcagaacctgcagtccaagaccaaccgggcc
gtggccaacaccaggcccgtgaaggcagccgtcaacctggagggcaagatcgagcaggcc
cagcgctggatagacaaccccagcgtcgatgaccgcggagtgggtggtgaggcgctccgt
gctgctgtacgccttgacctcgcagctgaatcggacagtcctattgcgagtttggtggat
gaagccattgacaccaagtccctgctggacgcctccgaggacgccatcaagaaggacatt
gacaagtgccgtgtggccatggccaacgtgcagccccagatgctcgtcgccggggcaacc
agcatcgcgcgccgggccaaccgcatcctgctggtggcgaaacgggaggtggagaactcg
gaggaccccaagttccgcgaggcggtgaaggccgcctcggacgagctgagcacaaccatc
tcccccatggtcatggatgccaaggccgtggccgggaacatacaggacccaggtctacag
aagagcttcctggactctggatacaggattctgggagccgtggccaaagtacgtgaggcc
ttccagccccaggagcccgacttccctccaccccctccagatctggatcaactgcatgtt
aacgacgagcctgctccccccaagccccctctccccgagggtgaggtgccccctcccaga
cccccgcccccggaggagaaggacgaggagttccccgagcagaaggccggggaggtggtc
aaccagcccatgatggtggcggccaggcagctgcacgaggaagccaggaagtggtccagc
aagcccgatgtgactgatgagggtattgaagccgcagaggcggatgtagatatagatgat
gaggacgaagtcgacgatattgagttcaccctcccctcagacaatgaagatgattacgag
cccgagctgctcttaatgcccaccaatcagcccgttaaccagcccattctggctgctgcc
cggtctttacaccaggaagcgcgcaagtggtccagtaagggcaacgacatcatcggcgcg
gccaagcgcatggcgctgctgatggccgagatgtcccggctggtgcggggcggcagcggg
aacaagcgcgccctgatccagtgcgccaaggacatcgccaaggcctccgacgaggtcacc
cggctggccaaggaggtggccaagcagtgcaccgacaagaggatccgcaccaacctgctg
caggtgtgtgagcgaatccccaccatcagcacgcagctgaagatcctgtccactgtcaag
gccaccatgctgggccgcaccaacatcagcgaggaggagtcggagcaggccaccgaaatg
ttggtgcacaacgcccagaacctgatgcagtccgtcaaggagacggtgagagaagccgag
gcagcctccatcaagatccgcacggacgctgggttcaccctgcgctgggtgaggaagaca
ccctggtaccagtaa
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